Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu063676.1 Olea europaea HOM05D006382 ORTHO05D008938 3.0e-273 944.5 458 100.0
Oeu063675.1 Olea europaea HOM05D006382 ORTHO05D008938 2.2e-151 539.7 494 61.5
Sabra02G0146800 Salix brachista HOM05D006382 ORTHO05D008938 3.2e-142 509.2 480 57.1
Potri.002G164700 Populus trichocarpa HOM05D006382 ORTHO05D008938 9.5e-142 507.7 486 56.8
MSTRG.17299 Avicennia marina HOM05D006382 ORTHO05D008938 4.7e-141 505.4 477 58.1
Hma1.2p1_0335F.1_g128860 Hydrangea macrophylla HOM05D006382 ORTHO05D008938 3.0e-140 502.7 482 57.3
Phvul.008G058200 Phaseolus vulgaris HOM05D006382 ORTHO05D008938 3.0e-140 502.7 479 56.6
Dinv43864 Davidia involucrata HOM05D006382 ORTHO05D008938 4.0e-140 502.3 477 57.2
GSVIVG01026968001 Vitis vinifera HOM05D006382 ORTHO05D008938 4.0e-140 502.3 482 56.4
Rhsim07G0010300 Rhododendron simsii HOM05D006382 ORTHO05D008938 6.8e-140 501.5 471 58.8
Actinidia20164 Actinidia chinensis HOM05D006382 ORTHO05D008938 8.8e-140 501.1 479 57.8
FAN06G0271 Fragaria x ananassa HOM05D006382 ORTHO05D008938 3.4e-139 499.2 465 58.1
SalBow3G4256 Salvia bowleyana HOM05D006382 ORTHO05D008938 5.7e-139 498.4 488 56.6
TWI59G0052 Tripterygium wilfordii HOM05D006382 ORTHO05D008938 5.7e-139 498.4 474 56.3
CSS0000318 Camellia sinensis var. sinensis HOM05D006382 ORTHO05D008938 1.3e-138 497.3 480 56.5
RcHm_v2.0_Chr1g0357731 Rosa chinensis HOM05D006382 ORTHO05D008938 1.3e-138 497.3 483 56.3
arahy.Tifrunner.gnm1.ann1.FF5BCH Arachis hypogaea HOM05D006382 ORTHO05D008938 1.7e-138 496.9 478 55.9
arahy.Tifrunner.gnm1.ann1.Z348XU Arachis hypogaea HOM05D006382 ORTHO05D008938 2.8e-138 496.1 478 55.9
vmacro13226 Vaccinium macrocarpon HOM05D006382 ORTHO05D008938 2.8e-138 496.1 496 55.6
CSS0031254 Camellia sinensis var. sinensis HOM05D006382 ORTHO05D008938 3.7e-138 495.7 492 55.1
Lj1g0001840 Lotus japonicus HOM05D006382 ORTHO05D008938 8.3e-138 494.6 486 54.7
FvH4_7g15410 Fragaria vesca HOM05D006382 ORTHO05D008938 1.1e-137 494.2 483 56.1
VMungo1383G3370 Vigna mungo HOM05D006382 ORTHO05D008938 1.1e-137 494.2 479 55.5
Atru.chr5.564 Acer truncatum HOM05D006382 ORTHO05D008938 1.4e-137 493.8 484 56.0
Ciclev10019743m.g Citrus clementina HOM05D006382 ORTHO05D008938 4.1e-137 492.3 479 56.4
TPR.G35789 Trifolium pratense HOM05D006382 ORTHO05D008938 7.0e-137 491.5 477 56.0
Nitab4.5_0000915g0130 Nicotiana tabacum HOM05D006382 ORTHO05D008938 1.6e-136 490.3 485 55.5
FAN01G1899 Fragaria x ananassa HOM05D006382 ORTHO05D008938 2.0e-136 490.0 483 55.5
Medtr7g079030 Medicago truncatula HOM05D006382 ORTHO05D008938 2.0e-136 490.0 477 56.0
SGA_v2.0_scaffold4G02278 Striga asiatica HOM05D006382 ORTHO05D008938 7.8e-136 488.0 485 55.3
MD01G1071500 Malus domestica HOM05D006382 ORTHO05D008938 1.0e-135 487.6 486 55.1
ClCG05G001220 Citrullus lanatus HOM05D006382 ORTHO05D008938 1.7e-135 486.9 473 55.4
Eucgr.D02325 Eucalyptus grandis HOM05D006382 ORTHO05D008938 2.3e-135 486.5 479 55.1
Cpa.g.sc11.72 Carica papaya HOM05D006382 ORTHO05D008938 2.9e-135 486.1 488 55.7
PGSC0003DMG400000065 Solanum tuberosum HOM05D006382 ORTHO05D008938 5.0e-135 485.3 479 55.7
Sopen01g038910 Solanum pennellii HOM05D006382 ORTHO05D008938 8.6e-135 484.6 479 55.9
Glyma.18G238400 Glycine max HOM05D006382 ORTHO05D008938 1.9e-134 483.4 484 53.9
Lalb_Chr19g0126881 Lupinus albus HOM05D006382 ORTHO05D008938 1.9e-134 483.4 485 53.0
Peaxi162Scf00020g01516 Petunia axillaris HOM05D006382 ORTHO05D008938 1.9e-134 483.4 473 55.2
Prupe.2G177700 Prunus persica HOM05D006382 ORTHO05D008938 1.9e-134 483.4 483 55.7
Actinidia10076 Actinidia chinensis HOM05D006382 ORTHO05D008938 2.5e-134 483.0 455 58.7
QL04p055600 Quercus lobata HOM05D006382 ORTHO05D008938 2.5e-134 483.0 477 54.7
Gohir.A11G092400 Gossypium hirsutum HOM05D006382 ORTHO05D008938 5.6e-134 481.9 484 54.5
Psat3g105480 Pisum sativum HOM05D006382 ORTHO05D008938 5.6e-134 481.9 477 54.7
MELO3C006077.2 Cucumis melo HOM05D006382 ORTHO05D008938 9.5e-134 481.1 472 54.9
Thecc.01G352300 Theobroma cacao HOM05D006382 ORTHO05D008938 9.5e-134 481.1 485 54.4
Ca_07943_v3 Cicer arietinum L. HOM05D006382 ORTHO05D008938 4.7e-133 478.8 466 54.9
Sed0009049 Sechium edule HOM05D006382 ORTHO05D008938 4.7e-133 478.8 480 55.2
CiPaw.01G067600 Carya illinoinensis HOM05D006382 ORTHO05D008938 6.1e-133 478.4 477 54.9
Nitab4.5_0010695g0050 Nicotiana tabacum HOM05D006382 ORTHO05D008938 6.1e-133 478.4 489 54.4
Sc01g0003200 Simmondsia chinensis HOM05D006382 ORTHO05D008938 6.1e-133 478.4 483 52.6
Solyc01g095120.3 Solanum lycopersicum HOM05D006382 ORTHO05D008938 6.1e-133 478.4 476 55.7
Aqoxy7G00230 Aquilegia oxysepala HOM05D006382 ORTHO05D008938 1.4e-132 477.2 477 56.6
CsaV3_3G008570 Cucumis sativus L. HOM05D006382 ORTHO05D008938 1.8e-132 476.9 472 54.7
Cfa003871 Carpinus fangiana HOM05D006382 ORTHO05D008938 3.0e-132 476.1 484 54.3
Glyma.09G254600 Glycine max HOM05D006382 ORTHO05D008938 3.0e-132 476.1 477 54.3
FAN06G2792 Fragaria x ananassa HOM05D006382 ORTHO05D008938 4.0e-132 475.7 512 52.5
Atru.BG.55.p Acer truncatum HOM05D006382 ORTHO05D008938 5.2e-132 475.3 476 55.5
Thhalv10005890m.g Eutrema salsugineum HOM05D006382 ORTHO05D008938 2.6e-131 473.0 479 53.2
Haze_15566 Corylus avellana HOM05D006382 ORTHO05D008938 1.3e-130 470.7 496 53.2
PSO266G0056 Papaver somniferum HOM05D006382 ORTHO05D008938 1.7e-130 470.3 492 53.5
CANSAT56G1207 Cannabis sativa HOM05D006382 ORTHO05D008938 2.2e-130 469.9 485 53.8
Carub.0005s2823 Capsella rubella HOM05D006382 ORTHO05D008938 2.2e-130 469.9 479 53.0
Gorai.007G103500 Gossypium raimondii HOM05D006382 ORTHO05D008938 2.2e-130 469.9 480 54.6
Duzib133G1372 Durio zibethinus HOM05D006382 ORTHO05D008938 6.4e-130 468.4 485 52.8
THA.LOC104827604 Tarenaya hassleriana HOM05D006382 ORTHO05D008938 8.3e-130 468.0 485 53.4
FAN03G1976 Fragaria x ananassa HOM05D006382 ORTHO05D008938 1.4e-129 467.2 510 52.0
Sp5g01870 Schrenkiella parvula HOM05D006382 ORTHO05D008938 1.8e-129 466.8 480 53.5
CARHR171860 Cardamine hirsuta HOM05D006382 ORTHO05D008938 5.4e-129 465.3 479 52.6
AL5G43900 Arabidopsis lyrata HOM05D006382 ORTHO05D008938 1.2e-128 464.2 479 52.4
C06p27550 Brassica napus HOM05D006382 ORTHO05D008938 1.0e-127 461.1 478 53.6
HanXRQChr17g0562131 Helianthus annuus HOM05D006382 ORTHO05D008938 1.0e-127 461.1 482 52.1
Nn1g01689 Nelumbo nucifera HOM05D006382 ORTHO05D008938 1.0e-127 461.1 476 54.0
BcaC08g45134 Brassica carinata HOM05D006382 ORTHO05D008938 1.3e-127 460.7 478 53.3
A07p25560 Brassica napus HOM05D006382 ORTHO05D008938 2.3e-127 459.9 488 52.9
PSO384G0256 Papaver somniferum HOM05D006382 ORTHO05D008938 2.3e-127 459.9 493 52.3
BolC6t37923H Brassica oleracea HOM05D006382 ORTHO05D008938 5.0e-127 458.8 478 53.3
EL10Ac1g00353 Beta vulgaris HOM05D006382 ORTHO05D008938 6.6e-127 458.4 483 51.8
Cc02_g38570 Coffea canephora HOM05D006382 ORTHO05D008938 6.6e-127 458.4 475 54.5
AT3G61540 Arabidopsis thaliana HOM05D006382 ORTHO05D008938 1.1e-126 457.6 479 52.8
BraA07t30197Z Brassica rapa HOM05D006382 ORTHO05D008938 1.5e-126 457.2 487 52.4
Lj9C589T7 Lonicera japonica HOM05D006382 ORTHO05D008938 1.9e-126 456.8 529 49.1
AUR62004414 Chenopodium quinoa HOM05D006382 ORTHO05D008938 1.2e-125 454.1 483 51.1
BcaB02g07372 Brassica carinata HOM05D006382 ORTHO05D008938 3.6e-125 452.6 488 52.5
DCAR_005361 Daucus carota HOM05D006382 ORTHO05D008938 1.4e-124 450.7 484 51.9
MBI06_g33533_MAGBIO Magnolia biondii HOM05D006382 ORTHO05D008938 1.8e-124 450.3 468 52.4
ECA234G1133 Erigeron canadensis HOM05D006382 ORTHO05D008938 1.5e-123 447.2 468 52.1
CANSAT56G3955 Cannabis sativa HOM05D006382 ORTHO05D008938 6.4e-122 441.8 480 51.7
HPP92_008800 Vanilla planifolia HOM05D006382 ORTHO05D008938 5.4e-121 438.7 472 50.0
Lsat_1_v5_gn_4_35160 Lactuca sativa HOM05D006382 ORTHO05D008938 2.7e-120 436.4 472 51.9
unitig_747.g21323 Utricularia gibba HOM05D000887 ORTHO05D000908 2.3e-119 433.3 464 53.7
CDE10G0280 Ceratophyllum demersum HOM05D006382 ORTHO05D008938 1.1e-118 431.0 474 50.6
ATR0721G029 Amborella trichopoda HOM05D006382 ORTHO05D008938 6.2e-117 425.2 468 52.1
Pp3c20_22770 Physcomitrium patens HOM05D006382 ORTHO05D008938 6.6e-111 405.2 466 47.9
Aa31LG10G15440 Aethionema arabicum HOM05D006382 ORTHO05D008938 1.1e-110 404.4 450 50.4
AUR62022620 Chenopodium quinoa HOM05D006382 ORTHO05D008938 1.9e-110 403.7 514 45.9
Mapoly0179s0013 Marchantia polymorpha HOM05D006382 ORTHO05D008938 5.8e-107 392.1 477 46.1
CAN.G78.131 Capsicum annuum HOM05D006382 ORTHO05D008938 1.9e-105 387.1 338 59.8
COL.COLO4_12779 Corchorus olitorius HOM05D006382 ORTHO05D008938 1.2e-104 384.4 436 50.9
SMO134G0292 Selaginella moellendorffii HOM05D006382 ORTHO05D008938 1.1e-102 377.9 472 46.8
Migut.B01800 Erythranthe guttata HOM05D006382 ORTHO05D008938 9.9e-99 364.8 428 47.7
Ah.05g180140 Amaranthus hybridus HOM05D006382 ORTHO05D008938 1.1e-94 351.3 493 43.6
Manes.05G029200 Manihot esculenta HOM05D006382 ORTHO05D008938 1.5e-83 314.3 373 49.3
Gohir.D11G097200 Gossypium hirsutum HOM05D006382 ORTHO05D008938 8.4e-82 308.5 375 48.5
TAR629G1903 Trochodendron aralioides HOM05D006382 ORTHO05D008938 6.0e-80 302.4 296 56.1
Potri.014G090601 Populus trichocarpa HOM05D006382 ORTHO05D008938 1.3e-71 274.6 271 55.0
Cre03.g193700 Chlamydomonas reinhardtii HOM05D006382 ORTHO05D008938 2.6e-67 260.4 487 35.9
MCO14G065 Micromonas commoda HOM05D006382 ORTHO05D008938 1.1e-60 238.4 487 35.7
Zm00001eb375690 Zea mays HOM05D006382 ORTHO05D008938 2.9e-58 230.3 276 48.2
PRCOL_00004635 Prasinoderma coloniale HOM05D006382 ORTHO05D008938 1.4e-57 228.0 481 34.3
Cfa025852 Carpinus fangiana HOM05D006382 ORTHO05D008938 2.8e-37 160.6 473 27.7
Os06g0163600 Oryza sativa ssp. japonica HOM05D006382 ORTHO05D008938 1.3e-34 151.8 99 69.7
SMO139G0016 Selaginella moellendorffii HOM05D006382 ORTHO05D376983 3.6e-24 117.1 248 35.1
Hma1.2p1_0036F.1_g022810 Hydrangea macrophylla HOM05D006382 ORTHO05D228417 2.4e-20 104.4 70 68.6
Hma1.2p1_0036F.1_g022815 Hydrangea macrophylla HOM05D006382 ORTHO05D228242 2.4e-20 104.4 70 68.6
Hma1.2p1_0515F.1_g170355 Hydrangea macrophylla HOM05D006382 ORTHO05D228454 2.4e-20 104.4 70 68.6
Hma1.2p1_1019F.1_g248455 Hydrangea macrophylla HOM05D006382 ORTHO05D228422 2.4e-20 104.4 70 68.6
SMO165G0168 Selaginella moellendorffii HOM05D006382 ORTHO05D374182 6.4e-13 79.7 94 50.0
C04p33670 Brassica napus HOM05D006382 ORTHO05D024383 5.6e-09 66.6 75 52.0
BolC4t24936H Brassica oleracea HOM05D006382 ORTHO05D024383 5.6e-09 66.6 75 52.0
BcaB04g18088 Brassica carinata HOM05D006382 ORTHO05D024383 6.2e-08 63.2 42 78.6
Actinidia17930 Actinidia chinensis HOM05D006382 ORTHO05D008938 2.3e-07 61.2 41 73.2
CsaV3_3G008600 Cucumis sativus L. HOM05D006382 ORTHO05D172594 4.4e-06 57.0 67 44.8
Ah.05g180150 Amaranthus hybridus HOM05D006382 ORTHO05D060446 5.8e-06 56.6 55 50.9


User provided reference genes

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