Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu063673.2 Olea europaea HOM05D002932 ORTHO05D003208 5.7e-110 401.0 209 100.0
Oeu054360.1 Olea europaea HOM05D002932 ORTHO05D003208 8.3e-77 290.8 255 64.3
MSTRG.17303 Avicennia marina HOM05D002932 ORTHO05D003208 6.2e-48 194.9 245 47.8
MSTRG.4831 Avicennia marina HOM05D002932 ORTHO05D003208 1.1e-44 184.1 246 45.1
MSTRG.20870 Avicennia marina HOM05D002932 ORTHO05D003208 1.3e-42 177.2 243 46.9
SGA_v2.0_scaffold11G05690 Striga asiatica HOM05D002932 ORTHO05D003208 5.3e-39 165.2 242 45.5
Dinv32532 Davidia involucrata HOM05D002932 ORTHO05D003208 2.4e-31 139.8 260 43.5
SalBow3G2518 Salvia bowleyana HOM05D002932 ORTHO05D003208 9.9e-30 134.4 234 42.7
Dinv43873 Davidia involucrata HOM05D002932 ORTHO05D003208 1.2e-27 127.5 280 34.3
Cc02_g38700 Coffea canephora HOM05D002932 ORTHO05D003208 4.6e-27 125.6 255 37.3
Peaxi162Scf00020g00174 Petunia axillaris HOM05D002932 ORTHO05D003208 2.1e-24 116.7 264 35.2
Nitab4.5_0009475g0010 Nicotiana tabacum HOM05D002932 ORTHO05D003208 1.4e-23 114.0 263 36.1
Atru.chr5.594 Acer truncatum HOM05D002932 ORTHO05D003208 1.8e-23 113.6 259 35.1
Actinidia20171 Actinidia chinensis HOM05D002932 ORTHO05D003208 1.8e-23 113.6 259 35.5
Nitab4.5_0000305g0360 Nicotiana tabacum HOM05D002932 ORTHO05D003208 1.5e-22 110.5 265 34.0
unitig_62.g23806 Utricularia gibba HOM05D001977 ORTHO05D002246 1.5e-22 110.5 238 36.1
Manes.14G020200 Manihot esculenta HOM05D002932 ORTHO05D003208 4.9e-21 105.5 259 32.0
PGSC0003DMG402000198 Solanum tuberosum HOM05D002932 ORTHO05D003208 4.9e-21 105.5 277 33.9
Duzib084G0326 Durio zibethinus HOM05D002932 ORTHO05D003208 3.2e-20 102.8 260 29.6
Cpa.g.sc3.12 Carica papaya HOM05D002932 ORTHO05D003208 4.2e-20 102.4 224 34.8
TAR374G1073 Trochodendron aralioides HOM05D002932 ORTHO05D003208 5.5e-20 102.1 262 30.9
GSVIVG01028788001 Vitis vinifera HOM05D003816 ORTHO05D004410 7.1e-20 101.7 260 32.3
Duzib205G0983 Durio zibethinus HOM05D002932 ORTHO05D003208 9.3e-20 101.3 258 30.2
DCAR_006952 Daucus carota HOM05D002932 ORTHO05D003208 1.2e-19 100.9 237 33.3
Duzib068G0647 Durio zibethinus HOM05D002932 ORTHO05D003208 1.2e-19 100.9 258 29.1
CAN.G78.138 Capsicum annuum HOM05D002932 ORTHO05D003208 2.1e-19 100.1 278 34.5
Hma1.2p1_0142F.1_g064300 Hydrangea macrophylla HOM05D002932 ORTHO05D003208 2.1e-19 100.1 254 29.9
Thecc.03G188500 Theobroma cacao HOM05D002932 ORTHO05D003208 2.7e-19 99.8 259 29.3
Potri.012G035200 Populus trichocarpa HOM05D002932 ORTHO05D003208 3.5e-19 99.4 260 30.8
Manes.06G154700 Manihot esculenta HOM05D002932 ORTHO05D003208 4.6e-19 99.0 258 31.0
Migut.B01809 Erythranthe guttata HOM05D002932 ORTHO05D003208 6.0e-19 98.6 181 41.4
Gohir.A12G254433 Gossypium hirsutum HOM05D002932 ORTHO05D003208 7.9e-19 98.2 256 30.5
Manes.01G251500 Manihot esculenta HOM05D002932 ORTHO05D003208 7.9e-19 98.2 258 31.4
Sabra12G0024300 Salix brachista HOM05D002932 ORTHO05D003208 1.3e-18 97.4 256 29.7
COL.COLO4_30256 Corchorus olitorius HOM05D002932 ORTHO05D003208 1.8e-18 97.1 259 29.7
Lalb_Chr04g0256131 Lupinus albus HOM05D002932 ORTHO05D003208 2.3e-18 96.7 252 31.0
Potri.014G091500 Populus trichocarpa HOM05D002932 ORTHO05D003208 3.0e-18 96.3 253 31.2
Glyma.16G173400 Glycine max HOM05D002932 ORTHO05D003208 3.9e-18 95.9 229 32.3
Dinv28362 Davidia involucrata HOM05D002932 ORTHO05D003208 5.1e-18 95.5 259 30.9
Gohir.D12G255000 Gossypium hirsutum HOM05D002932 ORTHO05D003208 5.1e-18 95.5 233 35.6
Gorai.008G272600 Gossypium raimondii HOM05D002932 ORTHO05D003208 5.1e-18 95.5 233 35.6
SGA_v2.0_scaffold4G02273 Striga asiatica HOM05D002932 ORTHO05D003208 6.7e-18 95.1 253 32.8
Ciclev10023540m.g Citrus clementina HOM05D002932 ORTHO05D003208 8.7e-18 94.7 246 34.1
Sabra15G0019600 Salix brachista HOM05D002932 ORTHO05D003208 8.7e-18 94.7 257 29.2
Duzib138G0190 Durio zibethinus HOM05D002932 ORTHO05D003208 1.1e-17 94.4 258 29.8
Glyma.09G126400 Glycine max HOM05D002932 ORTHO05D003208 1.1e-17 94.4 233 33.9
Dinv35290 Davidia involucrata HOM05D002932 ORTHO05D003208 1.5e-17 94.0 259 29.7
CiPaw.06G005800 Carya illinoinensis HOM05D002932 ORTHO05D003208 2.5e-17 93.2 240 34.6
VMungo0464G0277 Vigna mungo HOM05D002932 ORTHO05D003208 3.3e-17 92.8 234 33.3
Duzib133G1077 Durio zibethinus HOM05D002932 ORTHO05D003208 4.3e-17 92.4 258 29.5
Potri.015G026600 Populus trichocarpa HOM05D002932 ORTHO05D003208 4.3e-17 92.4 260 30.0
Glyma.10G229200 Glycine max HOM05D002932 ORTHO05D003208 5.7e-17 92.0 237 32.9
QL09p012032 Quercus lobata HOM05D002932 ORTHO05D003208 5.7e-17 92.0 238 31.9
Sopen01g039030 Solanum pennellii HOM05D002932 ORTHO05D003208 5.7e-17 92.0 265 30.9
Actinidia08604 Actinidia chinensis HOM05D002932 ORTHO05D003208 9.6e-17 91.3 262 31.3
Hma1.2p1_0783F.1_g216930 Hydrangea macrophylla HOM05D002932 ORTHO05D003208 9.6e-17 91.3 191 34.6
Sabra14G0066400 Salix brachista HOM05D002932 ORTHO05D003208 1.3e-16 90.9 249 30.9
Phvul.004G102700 Phaseolus vulgaris HOM05D002932 ORTHO05D003208 1.6e-16 90.5 234 32.9
Sabra15G0022400 Salix brachista HOM05D002932 ORTHO05D003208 1.6e-16 90.5 257 28.4
Glyma.20G164000 Glycine max HOM05D002932 ORTHO05D003208 2.1e-16 90.1 234 33.3
PGR031G1724 Punica granatum HOM05D002932 ORTHO05D003208 2.1e-16 90.1 242 31.0
vmacro06597 Vaccinium macrocarpon HOM05D002932 ORTHO05D003208 2.1e-16 90.1 238 31.5
Cfa016327 Carpinus fangiana HOM05D002932 ORTHO05D003208 2.8e-16 89.7 270 30.0
VMungo0720G0620 Vigna mungo HOM05D002932 ORTHO05D003208 2.8e-16 89.7 236 31.8
Lalb_Chr21g0305311 Lupinus albus HOM05D002932 ORTHO05D003208 8.2e-16 88.2 260 28.5
Nn7g37319 Nelumbo nucifera HOM05D002932 ORTHO05D003208 8.2e-16 88.2 261 35.2
Haze_00079 Corylus avellana HOM05D002932 ORTHO05D003208 1.4e-15 87.4 271 30.6
Phvul.007G077100 Phaseolus vulgaris HOM05D002932 ORTHO05D003208 1.8e-15 87.0 241 29.5
PGR042G1004 Punica granatum HOM05D002932 ORTHO05D003208 1.8e-15 87.0 237 32.5
TAR629G3108 Trochodendron aralioides HOM05D002932 ORTHO05D003208 2.4e-15 86.7 257 30.4
Solyc01g095240.3 Solanum lycopersicum HOM05D002932 ORTHO05D003208 3.1e-15 86.3 266 30.1
TAR636G0499 Trochodendron aralioides HOM05D002932 ORTHO05D003208 4.0e-15 85.9 228 31.6
Actinidia03151 Actinidia chinensis HOM05D002932 ORTHO05D003208 6.9e-15 85.1 232 33.6
TPR.G7742 Trifolium pratense HOM05D002932 ORTHO05D003208 6.9e-15 85.1 232 34.1
Lj5g0016966 Lotus japonicus HOM05D002932 ORTHO05D003208 9.0e-15 84.7 223 33.6
TWI23G0695 Tripterygium wilfordii HOM05D002932 ORTHO05D003208 9.0e-15 84.7 226 30.1
CSS0021611 Camellia sinensis var. sinensis HOM05D002932 ORTHO05D003208 1.2e-14 84.3 223 31.8
Gohir.D08G148800 Gossypium hirsutum HOM05D002932 ORTHO05D003208 1.5e-14 84.0 249 30.1
Gorai.004G154500 Gossypium raimondii HOM05D002932 ORTHO05D003208 1.5e-14 84.0 249 30.1
Psat0s694g0080 Pisum sativum HOM05D002932 ORTHO05D003208 1.5e-14 84.0 235 33.2
CAN.G959.5 Capsicum annuum HOM05D000001 ORTHO05D014548 2.0e-14 83.6 275 32.0
CSS0002659 Camellia sinensis var. sinensis HOM05D002932 ORTHO05D003208 2.6e-14 83.2 259 30.5
Eucgr.K00306 Eucalyptus grandis HOM05D002932 ORTHO05D003208 2.6e-14 83.2 233 29.2
Gohir.A08G127400 Gossypium hirsutum HOM05D002932 ORTHO05D003208 2.6e-14 83.2 249 29.7
Glyma.08G299600 Glycine max HOM05D002932 ORTHO05D003208 4.5e-14 82.4 250 30.4
Medtr1g099440 Medicago truncatula HOM05D002932 ORTHO05D003208 4.5e-14 82.4 238 32.4
Haze_15577 Corylus avellana HOM05D002932 ORTHO05D003208 7.6e-14 81.6 213 31.9
Haze_15582 Corylus avellana HOM05D002932 ORTHO05D003208 7.6e-14 81.6 213 31.9
Glyma.18G121000 Glycine max HOM05D002932 ORTHO05D003208 2.2e-13 80.1 253 29.2
TWI14G1190 Tripterygium wilfordii HOM05D002932 ORTHO05D003208 2.2e-13 80.1 226 31.9
Rhsim09G0202600 Rhododendron simsii HOM05D002932 ORTHO05D003208 3.8e-13 79.3 222 29.7
VMungo0251G1401 Vigna mungo HOM05D002932 ORTHO05D003208 5.0e-13 79.0 240 29.6
CAN.G694.15 Capsicum annuum HOM05D001716 ORTHO05D003208 6.5e-13 78.6 264 31.1
Medtr5g039840 Medicago truncatula HOM05D002932 ORTHO05D003208 6.5e-13 78.6 212 31.1
Ciclev10005884m.g Citrus clementina HOM05D002932 ORTHO05D003208 8.4e-13 78.2 169 33.7
vmacro10092 Vaccinium macrocarpon HOM05D002932 ORTHO05D003208 8.4e-13 78.2 110 43.6
CSS0013096 Camellia sinensis var. sinensis HOM05D002932 ORTHO05D003208 1.1e-12 77.8 255 30.2
Phvul.003G048900 Phaseolus vulgaris HOM05D002932 ORTHO05D003208 1.1e-12 77.8 247 28.7
Lalb_Chr01g0009541 Lupinus albus HOM05D002932 ORTHO05D003208 1.4e-12 77.4 231 31.2
PGR142G0585 Punica granatum HOM05D002932 ORTHO05D003208 1.4e-12 77.4 229 31.0
Glyma.02G106200 Glycine max HOM05D002932 ORTHO05D003208 1.9e-12 77.0 247 29.6
Sed0008251 Sechium edule HOM05D002932 ORTHO05D003208 1.9e-12 77.0 234 29.1
AUR62022626 Chenopodium quinoa HOM05D005133 ORTHO05D006685 2.5e-12 76.6 171 33.9
ClCG05G008540 Citrullus lanatus HOM05D002932 ORTHO05D003208 3.2e-12 76.3 266 26.3
Medtr7g039720 Medicago truncatula HOM05D002932 ORTHO05D003208 3.2e-12 76.3 215 31.6
MELO3C006960.2 Cucumis melo HOM05D002932 ORTHO05D003208 4.2e-12 75.9 263 25.5
Glyma.01G045900 Glycine max HOM05D002932 ORTHO05D003208 4.2e-12 75.9 221 29.9
Lalb_Chr03g0035141 Lupinus albus HOM05D002932 ORTHO05D003208 4.2e-12 75.9 233 31.8
Sed0015119 Sechium edule HOM05D002932 ORTHO05D003208 5.5e-12 75.5 267 24.7
Eucgr.A02685 Eucalyptus grandis HOM05D002932 ORTHO05D003208 7.1e-12 75.1 229 28.4
MD07G1282200 Malus domestica HOM05D002932 ORTHO05D003208 7.1e-12 75.1 242 28.9
Medtr6g034055 Medicago truncatula HOM05D002932 ORTHO05D003208 7.1e-12 75.1 231 32.5
SalBow4G2867 Salvia bowleyana HOM05D002932 ORTHO05D003208 7.1e-12 75.1 213 31.0
CsaV3_3G021720 Cucumis sativus L. HOM05D002932 ORTHO05D003208 9.3e-12 74.7 263 25.5
Lj2g0019721 Lotus japonicus HOM05D002932 ORTHO05D003208 1.2e-11 74.3 217 34.1
TPR.G37115 Trifolium pratense HOM05D002932 ORTHO05D003208 1.2e-11 74.3 221 29.9
Nn1g01736 Nelumbo nucifera HOM05D002932 ORTHO05D003208 1.6e-11 73.9 233 28.3
unitig_0.g334 Utricularia gibba HOM05D002932 ORTHO05D003208 1.6e-11 73.9 237 28.7
Lalb_Chr02g0141341 Lupinus albus HOM05D002932 ORTHO05D003208 3.5e-11 72.8 252 29.4
PGSC0003DMG400019420 Solanum tuberosum HOM05D002932 ORTHO05D003208 3.5e-11 72.8 218 31.2
COL.COLO4_06371 Corchorus olitorius HOM05D002932 ORTHO05D003208 4.6e-11 72.4 205 29.8
Medtr6g034060 Medicago truncatula HOM05D002932 ORTHO05D003208 4.6e-11 72.4 241 29.9
Oeu009283.1 Olea europaea HOM05D002932 ORTHO05D003208 4.6e-11 72.4 257 28.4
Sopen10g005630 Solanum pennellii HOM05D002932 ORTHO05D003208 4.6e-11 72.4 213 32.4
Lsat_1_v5_gn_4_34860 Lactuca sativa HOM05D002932 ORTHO05D003208 6.1e-11 72.0 226 31.9
Oeu037130.1 Olea europaea HOM05D002932 ORTHO05D003208 6.1e-11 72.0 257 28.4
Psat1g099240 Pisum sativum HOM05D002932 ORTHO05D003208 6.1e-11 72.0 233 29.6
Psat1g099320 Pisum sativum HOM05D002932 ORTHO05D003208 6.1e-11 72.0 237 30.8
CSS0001843 Camellia sinensis var. sinensis HOM05D002932 ORTHO05D003208 7.9e-11 71.6 111 42.3
CSS0045579 Camellia sinensis var. sinensis HOM05D002932 ORTHO05D003208 7.9e-11 71.6 111 42.3
CAN.G1578.16 Capsicum annuum HOM05D002932 ORTHO05D003208 7.9e-11 71.6 117 45.3
Prupe.2G304400 Prunus persica HOM05D002932 ORTHO05D003208 1.0e-10 71.2 240 30.4
AUR62021078 Chenopodium quinoa HOM05D002932 ORTHO05D003208 1.3e-10 70.9 227 28.6
Sed0004021 Sechium edule HOM05D002932 ORTHO05D003208 1.3e-10 70.9 237 27.8
HanXRQChr16g0523761 Helianthus annuus HOM05D002932 ORTHO05D003208 1.8e-10 70.5 223 31.8
Psat1g106560 Pisum sativum HOM05D002932 ORTHO05D003208 1.8e-10 70.5 238 29.4
MD01G1211600 Malus domestica HOM05D002932 ORTHO05D003208 3.0e-10 69.7 239 27.6
TPR.G36701 Trifolium pratense HOM05D002932 ORTHO05D003208 3.0e-10 69.7 244 28.3
arahy.Tifrunner.gnm1.ann1.N7QM32 Arachis hypogaea HOM05D002932 ORTHO05D003208 3.9e-10 69.3 277 24.2
CANSAT21G2430 Cannabis sativa HOM05D002932 ORTHO05D003208 5.1e-10 68.9 239 27.2
CiPaw.02G036300 Carya illinoinensis HOM05D002932 ORTHO05D003208 6.7e-10 68.6 277 28.2
AUR62031454 Chenopodium quinoa HOM05D002932 ORTHO05D003208 6.7e-10 68.6 224 28.6
Psat1g099360 Pisum sativum HOM05D002932 ORTHO05D003208 6.7e-10 68.6 238 29.0
TPR.G36623 Trifolium pratense HOM05D002932 ORTHO05D003208 1.5e-09 67.4 238 31.9
CAN.G1578.6 Capsicum annuum HOM05D000129 ORTHO05D000997 2.5e-09 66.6 215 33.0
Rhsim03G0196300 Rhododendron simsii HOM05D002932 ORTHO05D003208 2.5e-09 66.6 230 31.3
MELO3C006073.2 Cucumis melo HOM05D002932 ORTHO05D003208 5.7e-09 65.5 238 24.8
Lj2g0001659 Lotus japonicus HOM05D002932 ORTHO05D003208 9.7e-09 64.7 236 27.5
arahy.Tifrunner.gnm1.ann1.M5AIDB Arachis hypogaea HOM05D002932 ORTHO05D003208 1.3e-08 64.3 254 27.6
RcHm_v2.0_Chr1g0379591 Rosa chinensis HOM05D002932 ORTHO05D003208 1.6e-08 63.9 247 30.4
Atru.chr1.321 Acer truncatum HOM05D002932 ORTHO05D003208 2.2e-08 63.5 249 27.7
Manes.05G028200 Manihot esculenta HOM05D002932 ORTHO05D003208 2.2e-08 63.5 229 28.4
EL10Ac3g05377 Beta vulgaris HOM05D002932 ORTHO05D003208 3.7e-08 62.8 225 29.3
FvH4_7g30650 Fragaria vesca HOM05D002932 ORTHO05D003208 4.8e-08 62.4 249 29.7
FAN06G0995 Fragaria x ananassa HOM05D002932 ORTHO05D003208 4.8e-08 62.4 249 29.7
Actinidia31853 Actinidia chinensis HOM05D002932 ORTHO05D003208 6.3e-08 62.0 176 30.1
CsaV3_3G008520 Cucumis sativus L. HOM05D002932 ORTHO05D003208 6.3e-08 62.0 207 27.5
FAN03G0587 Fragaria x ananassa HOM05D002932 ORTHO05D003208 6.3e-08 62.0 248 29.0
Sopen03g003700 Solanum pennellii HOM05D002932 ORTHO05D003208 6.3e-08 62.0 259 26.3
HPP92_023968 Vanilla planifolia HOM05D025792 ORTHO05D030716 6.3e-08 62.0 237 23.6
FAN10G0880 Fragaria x ananassa HOM05D002932 ORTHO05D003208 8.2e-08 61.6 249 29.7
FAN10G1573 Fragaria x ananassa HOM05D002932 ORTHO05D003208 8.2e-08 61.6 249 29.7
Gohir.D11G013600 Gossypium hirsutum HOM05D002932 ORTHO05D003208 8.2e-08 61.6 113 38.1
Medtr6g034050 Medicago truncatula HOM05D002932 ORTHO05D003208 8.2e-08 61.6 226 29.6
SalBow5G2308 Salvia bowleyana HOM05D002932 ORTHO05D003208 1.4e-07 60.8 221 32.1
Migut.F00261 Erythranthe guttata HOM05D002932 ORTHO05D003208 1.8e-07 60.5 232 26.7
CAN.G926.8 Capsicum annuum HOM05D002932 ORTHO05D003208 3.1e-07 59.7 223 30.0
ECA238G1001 Erigeron canadensis HOM05D002932 ORTHO05D003208 3.1e-07 59.7 241 27.0
Gohir.A11G013400 Gossypium hirsutum HOM05D002932 ORTHO05D003208 3.1e-07 59.7 113 37.2
PGSC0003DMG400019964 Solanum tuberosum HOM05D002932 ORTHO05D003208 6.9e-07 58.5 95 36.8
Ah.07g206300 Amaranthus hybridus HOM05D002932 ORTHO05D003208 9.0e-07 58.2 233 29.6
Peaxi162Scf00904g00468 Petunia axillaris HOM05D002932 ORTHO05D003208 1.5e-06 57.4 111 37.8
MBI07_g44813_MAGBIO Magnolia biondii HOM05D002932 ORTHO05D003208 2.6e-06 56.6 253 24.5
Thecc.01G350800 Theobroma cacao HOM05D002932 ORTHO05D003208 3.4e-06 56.2 166 28.9
Solyc03g007775.2 Solanum lycopersicum HOM05D002932 ORTHO05D003208 5.9e-06 55.5 91 37.4
HanXRQChr13g0392281 Helianthus annuus HOM05D002932 ORTHO05D003208 7.7e-06 55.1 94 38.3
Aqoxy1G02826 Aquilegia oxysepala HOM05D002932 ORTHO05D003208 1.0e-05 54.7 253 25.7
Eucgr.E00092 Eucalyptus grandis HOM05D002932 ORTHO05D003208 1.0e-05 54.7 71 40.8
THA.LOC104825123 Tarenaya hassleriana HOM05D002932 ORTHO05D003208 1.0e-05 54.7 226 27.9


User provided reference genes

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