Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu063669.1 Olea europaea HOM05D003005 ORTHO05D004170 7.1e-59 230.3 111 100.0
Oeu054372.1 Olea europaea HOM05D003005 ORTHO05D004170 4.9e-44 181.0 113 81.4
Dinv32540 Davidia involucrata HOM05D003005 ORTHO05D004170 6.2e-39 164.1 113 70.8
Dinv43883 Davidia involucrata HOM05D003005 ORTHO05D004170 6.2e-39 164.1 113 71.7
Actinidia10091 Actinidia chinensis HOM05D003005 ORTHO05D004170 9.0e-38 160.2 113 66.4
Ciclev10020418m.g Citrus clementina HOM05D003005 ORTHO05D004170 9.0e-38 160.2 113 67.3
Actinidia20178 Actinidia chinensis HOM05D003005 ORTHO05D004170 1.5e-37 159.5 113 67.3
Duzib133G0978 Durio zibethinus HOM05D003005 ORTHO05D004170 1.5e-37 159.5 113 67.3
Thecc.01G349400 Theobroma cacao HOM05D003005 ORTHO05D004170 2.6e-37 158.7 113 69.0
Gohir.A08G126700 Gossypium hirsutum HOM05D003005 ORTHO05D004170 3.4e-37 158.3 112 68.8
Hma1.2p1_0397F.1_g143750 Hydrangea macrophylla HOM05D003005 ORTHO05D004170 4.5e-37 157.9 113 69.0
Gohir.D08G148100 Gossypium hirsutum HOM05D003005 ORTHO05D004170 5.8e-37 157.5 112 67.9
Hma1.2p1_0384F.1_g140870 Hydrangea macrophylla HOM05D003005 ORTHO05D004170 5.8e-37 157.5 113 69.9
Gorai.004G153700 Gossypium raimondii HOM05D003005 ORTHO05D004170 9.9e-37 156.8 112 67.0
PGSC0003DMG400000081 Solanum tuberosum HOM05D003005 ORTHO05D004170 9.9e-37 156.8 113 69.0
MSTRG.20878 Avicennia marina HOM05D003005 ORTHO05D004170 1.3e-36 156.4 113 69.0
Gohir.A11G093400 Gossypium hirsutum HOM05D003005 ORTHO05D004170 1.7e-36 156.0 113 67.3
Nitab4.5_0004613g0080 Nicotiana tabacum HOM05D003005 ORTHO05D004170 2.2e-36 155.6 113 69.0
Peaxi162Scf01367g00003 Petunia axillaris HOM05D003005 ORTHO05D004170 2.2e-36 155.6 113 68.1
Cpa.g.sc184.7 Carica papaya HOM05D003005 ORTHO05D004170 2.9e-36 155.2 113 67.3
Gohir.D11G098400 Gossypium hirsutum HOM05D003005 ORTHO05D004170 2.9e-36 155.2 113 65.5
Gorai.007G104600 Gossypium raimondii HOM05D003005 ORTHO05D004170 2.9e-36 155.2 113 65.5
Nitab4.5_0000305g0320 Nicotiana tabacum HOM05D003005 ORTHO05D004170 2.9e-36 155.2 113 69.0
Manes.05G027500 Manihot esculenta HOM05D003005 ORTHO05D004170 3.8e-36 154.8 113 67.3
CANSAT56G3650 Cannabis sativa HOM05D003005 ORTHO05D004170 1.1e-35 153.3 113 67.3
Sabra02G0145100 Salix brachista HOM05D003005 ORTHO05D004170 1.1e-35 153.3 113 68.1
TWI14G0349 Tripterygium wilfordii HOM05D003005 ORTHO05D004170 1.4e-35 152.9 113 66.4
Sopen01g039140 Solanum pennellii HOM05D003005 ORTHO05D004170 1.9e-35 152.5 113 68.1
Potri.002G166500 Populus trichocarpa HOM05D003005 ORTHO05D004170 2.4e-35 152.1 113 67.3
Potri.014G093200 Populus trichocarpa HOM05D003005 ORTHO05D004170 4.2e-35 151.4 113 69.0
CiPaw.02G037400 Carya illinoinensis HOM05D003005 ORTHO05D004170 5.4e-35 151.0 113 64.6
SalBow5G2266 Salvia bowleyana HOM05D003005 ORTHO05D004170 9.3e-35 150.2 113 63.7
MSTRG.17309 Avicennia marina HOM05D003005 ORTHO05D004170 1.2e-34 149.8 112 68.8
MD01G1073800 Malus domestica HOM05D003005 ORTHO05D004170 2.1e-34 149.1 113 64.6
CAN.G78.147 Capsicum annuum HOM05D003005 ORTHO05D004170 2.7e-34 148.7 113 68.1
Prupe.2G181900 Prunus persica HOM05D003005 ORTHO05D004170 2.7e-34 148.7 113 65.5
TAR636G3621 Trochodendron aralioides HOM05D003005 ORTHO05D004170 2.7e-34 148.7 113 64.6
Manes.01G250600 Manihot esculenta HOM05D003005 ORTHO05D004170 3.5e-34 148.3 113 62.8
Duzib138G1905 Durio zibethinus HOM05D003005 ORTHO05D004170 4.6e-34 147.9 113 63.7
Solyc01g095370.3 Solanum lycopersicum HOM05D003005 ORTHO05D004170 6.0e-34 147.5 110 68.2
TAR629G3351 Trochodendron aralioides HOM05D003005 ORTHO05D004170 6.0e-34 147.5 113 66.4
GSVIVG01027030001 Vitis vinifera HOM05D003005 ORTHO05D004170 6.0e-34 147.5 112 64.3
Cfa003849 Carpinus fangiana HOM05D003005 ORTHO05D004170 7.9e-34 147.1 113 64.6
MBI07_g06328_MAGBIO Magnolia biondii HOM05D003005 ORTHO05D004170 7.9e-34 147.1 112 60.7
Oeu008676.1 Olea europaea HOM05D003005 ORTHO05D004170 1.0e-33 146.7 114 64.0
Cc02_g38810 Coffea canephora HOM05D003005 ORTHO05D004170 1.3e-33 146.4 113 65.5
QL04p057656 Quercus lobata HOM05D003005 ORTHO05D004170 3.0e-33 145.2 113 61.9
MD07G1142500 Malus domestica HOM05D003005 ORTHO05D004170 5.1e-33 144.4 113 62.8
Haze_15601 Corylus avellana HOM05D003005 ORTHO05D004170 6.7e-33 144.1 113 62.8
Sabra14G0067600 Salix brachista HOM05D003005 ORTHO05D004170 1.1e-32 143.3 113 66.4
CSS0028061 Camellia sinensis var. sinensis HOM05D003005 ORTHO05D004170 1.5e-32 142.9 113 62.8
CSS0046188 Camellia sinensis var. sinensis HOM05D003005 ORTHO05D004170 1.5e-32 142.9 113 62.8
Lsat_1_v5_gn_4_34441 Lactuca sativa HOM05D003005 ORTHO05D004170 1.5e-32 142.9 114 58.8
Lj3P338T13 Lonicera japonica HOM05D003005 ORTHO05D004170 1.5e-32 142.9 117 65.8
CiPaw.01G070300 Carya illinoinensis HOM05D003005 ORTHO05D004170 1.9e-32 142.5 113 61.9
COL.COLO4_06357 Corchorus olitorius HOM05D003005 ORTHO05D004170 2.5e-32 142.1 113 63.7
TWI23G1166 Tripterygium wilfordii HOM05D003005 ORTHO05D004170 1.6e-31 139.4 113 63.7
ClCG05G000990 Citrullus lanatus HOM05D003005 ORTHO05D004170 2.8e-31 138.7 112 57.1
vmacro13211 Vaccinium macrocarpon HOM05D003005 ORTHO05D004170 2.8e-31 138.7 113 61.1
CsaV3_3G008300 Cucumis sativus L. HOM05D003005 ORTHO05D004170 3.7e-31 138.3 113 56.6
Lj3g0000411 Lotus japonicus HOM05D003005 ORTHO05D004170 6.2e-31 137.5 113 61.1
Rhsim07G0008700 Rhododendron simsii HOM05D003005 ORTHO05D004170 6.2e-31 137.5 113 60.2
arahy.Tifrunner.gnm1.ann1.WVBE1P Arachis hypogaea HOM05D003005 ORTHO05D004170 1.1e-30 136.7 113 61.1
HanXRQChr16g0523861 Helianthus annuus HOM05D003005 ORTHO05D004170 1.1e-30 136.7 114 61.4
arahy.Tifrunner.gnm1.ann1.HVK0R9 Arachis hypogaea HOM05D003005 ORTHO05D004170 1.4e-30 136.3 113 61.1
MELO3C006049.2 Cucumis melo HOM05D003005 ORTHO05D004170 1.4e-30 136.3 113 56.6
SGA_v2.0_scaffold11G05706 Striga asiatica HOM05D003005 ORTHO05D004170 2.4e-30 135.6 117 60.7
Migut.N01573 Erythranthe guttata HOM05D003005 ORTHO05D004170 3.1e-30 135.2 112 60.7
arahy.Tifrunner.gnm1.ann1.49J1TU Arachis hypogaea HOM05D003005 ORTHO05D004170 6.9e-30 134.0 113 60.2
Migut.B01816 Erythranthe guttata HOM05D003005 ORTHO05D004170 6.9e-30 134.0 114 63.2
MBI06_g04298_MAGBIO Magnolia biondii HOM05D003005 ORTHO05D004170 2.0e-29 132.5 112 55.4
VMungo0540G0655 Vigna mungo HOM05D003005 ORTHO05D004170 2.6e-29 132.1 112 58.9
unitig_62.g23803 Utricularia gibba HOM05D003005 ORTHO05D004170 3.4e-29 131.7 114 57.9
Phvul.006G109200 Phaseolus vulgaris HOM05D003005 ORTHO05D004170 4.5e-29 131.3 112 59.8
Eucgr.D02335 Eucalyptus grandis HOM05D003005 ORTHO05D004170 9.9e-29 130.2 113 59.3
unitig_899.g14814 Utricularia gibba HOM05D003005 ORTHO05D004170 9.9e-29 130.2 112 59.8
ECA234G2880 Erigeron canadensis HOM05D003005 ORTHO05D004170 1.3e-28 129.8 114 58.8
Lj3g0003098 Lotus japonicus HOM05D003005 ORTHO05D004170 2.2e-28 129.0 113 58.4
Sed0023698 Sechium edule HOM05D003005 ORTHO05D004170 2.2e-28 129.0 113 54.9
DCAR_005370 Daucus carota HOM05D003005 ORTHO05D004170 2.9e-28 128.6 110 58.2
Sed0008353 Sechium edule HOM05D003005 ORTHO05D004170 3.8e-28 128.3 113 55.8
Glyma.19G252100 Glycine max HOM05D003005 ORTHO05D004170 6.4e-28 127.5 113 61.1
Sc26g0000790 Simmondsia chinensis HOM05D003005 ORTHO05D004170 1.1e-27 126.7 112 54.5
Glyma.03G254500 Glycine max HOM05D003005 ORTHO05D004170 2.4e-27 125.6 113 60.2
Oeu036574.1 Olea europaea HOM05D003005 ORTHO05D004170 5.5e-27 124.4 113 57.5
HanXRQChr17g0561991 Helianthus annuus HOM05D003005 ORTHO05D004170 9.3e-27 123.6 110 58.2
Lalb_Chr04g0261791 Lupinus albus HOM05D003005 ORTHO05D004170 1.6e-26 122.9 115 58.3
Phvul.010G107700 Phaseolus vulgaris HOM05D003005 ORTHO05D004170 2.1e-26 122.5 113 56.6
THA.LOC104817327 Tarenaya hassleriana HOM05D003005 ORTHO05D004170 2.7e-26 122.1 114 58.8
Ca_23557_v3 Cicer arietinum L. HOM05D003005 ORTHO05D004170 3.5e-26 121.7 113 56.6
Sopen05g028590 Solanum pennellii HOM05D003005 ORTHO05D004170 3.5e-26 121.7 110 54.5
THA.LOC104802052 Tarenaya hassleriana HOM05D003005 ORTHO05D004170 4.6e-26 121.3 114 59.6
EL10Ac1g00330 Beta vulgaris HOM05D003005 ORTHO05D004170 6.0e-26 120.9 107 59.8
Sc01g0003080 Simmondsia chinensis HOM05D003005 ORTHO05D004170 6.0e-26 120.9 112 54.5
VMungo0331G0185 Vigna mungo HOM05D003005 ORTHO05D004170 7.9e-26 120.6 113 54.9
AUR62004432 Chenopodium quinoa HOM05D003005 ORTHO05D004170 1.0e-25 120.2 111 56.8
Aqoxy7G00225 Aquilegia oxysepala HOM05D003005 ORTHO05D004170 1.3e-25 119.8 112 52.7
AUR62022639 Chenopodium quinoa HOM05D003005 ORTHO05D004170 1.8e-25 119.4 111 56.8
Aa31LG10G15410 Aethionema arabicum HOM05D003005 ORTHO05D004170 2.3e-25 119.0 114 54.4
Sp5g01820 Schrenkiella parvula HOM05D003005 ORTHO05D004170 2.3e-25 119.0 113 53.1
PSO384G2329 Papaver somniferum HOM05D003005 ORTHO05D004170 3.9e-25 118.2 110 56.4
CARHR171900 Cardamine hirsuta HOM05D003005 ORTHO05D004170 5.1e-25 117.9 114 52.6
BraA09t40787Z Brassica rapa HOM05D003005 ORTHO05D004170 6.7e-25 117.5 116 51.7
Hund16684 Selenicereus undatus HOM05D003005 ORTHO05D004170 6.7e-25 117.5 94 64.9
Thhalv10005970m.g Eutrema salsugineum HOM05D003005 ORTHO05D004170 1.1e-24 116.7 113 52.2
Ca_23550_v3 Cicer arietinum L. HOM05D003005 ORTHO05D004170 1.5e-24 116.3 111 54.1
Lalb_Chr10g0096491 Lupinus albus HOM05D003005 ORTHO05D004170 1.9e-24 115.9 113 54.0
Ah.05g180000 Amaranthus hybridus HOM05D003005 ORTHO05D004170 4.3e-24 114.8 113 55.8
Carub.0005s2828 Capsella rubella HOM05D003005 ORTHO05D004170 5.6e-24 114.4 113 51.3
PSO135G0840 Papaver somniferum HOM05D003005 ORTHO05D004170 9.6e-24 113.6 110 54.5
Medtr8g028250 Medicago truncatula HOM05D003005 ORTHO05D004170 1.3e-23 113.2 113 55.8
BcaC07g40660 Brassica carinata HOM05D003005 ORTHO05D004170 2.8e-23 112.1 116 50.9
BcaC07g40667 Brassica carinata HOM05D003005 ORTHO05D004170 2.8e-23 112.1 116 50.9
BcaC07g42675 Brassica carinata HOM05D003005 ORTHO05D004170 2.8e-23 112.1 116 50.9
BcaC07g42676 Brassica carinata HOM05D003005 ORTHO05D004170 2.8e-23 112.1 116 50.9
BcaC07g42677 Brassica carinata HOM05D003005 ORTHO05D004170 2.8e-23 112.1 116 50.9
C08p36430 Brassica napus HOM05D003005 ORTHO05D004170 2.8e-23 112.1 116 50.9
BolC4t24659H Brassica oleracea HOM05D003005 ORTHO05D004170 2.8e-23 112.1 115 49.6
BolC8t51226H Brassica oleracea HOM05D003005 ORTHO05D004170 2.8e-23 112.1 116 50.9
A04p01010 Brassica napus HOM05D003005 ORTHO05D004170 3.7e-23 111.7 119 47.9
BraA04t15818Z Brassica rapa HOM05D003005 ORTHO05D004170 3.7e-23 111.7 119 47.9
Hund27232 Selenicereus undatus HOM05D003005 ORTHO05D004170 3.7e-23 111.7 94 64.9
AL5G43980 Arabidopsis lyrata HOM05D003005 ORTHO05D004170 4.8e-23 111.3 113 51.3
PGR031G0299 Punica granatum HOM05D003005 ORTHO05D004170 6.2e-23 110.9 111 55.9
AT3G61590 Arabidopsis thaliana HOM05D003005 ORTHO05D004170 1.1e-22 110.2 113 50.4
BcaC07g42680 Brassica carinata HOM05D003005 ORTHO05D004170 1.1e-22 110.2 122 48.4
Nn7g37341 Nelumbo nucifera HOM05D003005 ORTHO05D004170 1.1e-22 110.2 116 51.7
CDE04G0104 Ceratophyllum demersum HOM05D003005 ORTHO05D004170 1.4e-22 109.8 99 55.6
SGA_v2.0_scaffold4G02268 Striga asiatica HOM05D003005 ORTHO05D004170 1.4e-22 109.8 117 50.4
Lj1g0007597 Lotus japonicus HOM05D003005 ORTHO05D004170 1.8e-22 109.4 113 54.9
TPR.G21289 Trifolium pratense HOM05D003005 ORTHO05D004170 1.8e-22 109.4 113 54.0
BraA07t30201Z Brassica rapa HOM05D003005 ORTHO05D004170 2.4e-22 109.0 115 49.6
A07p25600 Brassica napus HOM05D003005 ORTHO05D004170 3.1e-22 108.6 115 48.7
Dinv38881 Davidia involucrata HOM05D003005 ORTHO05D004170 4.0e-22 108.2 113 51.3
Psat4g213360 Pisum sativum HOM05D003005 ORTHO05D004170 6.9e-22 107.5 113 52.2
BcaC02g10235 Brassica carinata HOM05D003005 ORTHO05D004170 9.0e-22 107.1 115 47.8
C04p31230 Brassica napus HOM05D003005 ORTHO05D004170 9.0e-22 107.1 115 47.8
C06p27590 Brassica napus HOM05D003005 ORTHO05D004170 9.0e-22 107.1 115 47.8
BolC6t37928H Brassica oleracea HOM05D003005 ORTHO05D004170 9.0e-22 107.1 115 47.8
BcaB02g07368 Brassica carinata HOM05D003005 ORTHO05D004170 1.5e-21 106.3 114 48.2
BcaC08g45140 Brassica carinata HOM05D003005 ORTHO05D004170 1.5e-21 106.3 115 47.8
Dinv37565 Davidia involucrata HOM05D003005 ORTHO05D004170 1.5e-21 106.3 114 50.0
Psat4g158360 Pisum sativum HOM05D003005 ORTHO05D004170 2.0e-21 105.9 113 51.3
BcaB02g08152 Brassica carinata HOM05D003005 ORTHO05D004170 2.6e-21 105.5 117 47.0
RcHm_v2.0_Chr1g0358441 Rosa chinensis HOM05D003005 ORTHO05D004170 3.4e-21 105.1 113 48.7
ATR1093G033 Amborella trichopoda HOM05D003005 ORTHO05D004170 4.5e-21 104.8 93 60.2
Nn1g01765 Nelumbo nucifera HOM05D003005 ORTHO05D004170 1.0e-20 103.6 115 48.7
GSVIVG01019461001 Vitis vinifera HOM05D003005 ORTHO05D004170 1.0e-20 103.6 115 48.7
FAN01G2107 Fragaria x ananassa HOM05D003005 ORTHO05D004170 1.7e-20 102.8 113 46.9
FAN03G0870 Fragaria x ananassa HOM05D003005 ORTHO05D004170 1.7e-20 102.8 113 46.9
FvH4_7g15730 Fragaria vesca HOM05D003005 ORTHO05D004170 2.2e-20 102.4 113 46.9
FAN06G3916 Fragaria x ananassa HOM05D003005 ORTHO05D004170 2.2e-20 102.4 113 46.9
Medtr8g028220 Medicago truncatula HOM05D003005 ORTHO05D004170 2.9e-20 102.1 112 50.0
FAN06G2209 Fragaria x ananassa HOM05D003005 ORTHO05D004170 3.8e-20 101.7 113 46.9
TPR.G21283 Trifolium pratense HOM05D003005 ORTHO05D004170 3.8e-20 101.7 112 47.3
FAN10G2614 Fragaria x ananassa HOM05D003005 ORTHO05D004170 4.9e-20 101.3 113 46.9
FAN10G1408 Fragaria x ananassa HOM05D003005 ORTHO05D004170 1.9e-19 99.4 113 46.9
Lalb_Chr18g0044251 Lupinus albus HOM05D003005 ORTHO05D004170 5.5e-19 97.8 109 49.5
CSS0014351 Camellia sinensis var. sinensis HOM05D003005 ORTHO05D004170 1.2e-18 96.7 82 61.0
QL02p032184 Quercus lobata HOM05D003005 ORTHO05D004170 1.2e-18 96.7 113 50.4
Zm00001eb157830 Zea mays HOM05D003005 ORTHO05D004170 2.1e-18 95.9 112 47.3
SEGI_09375 Sequoiadendron giganteum HOM05D003005 ORTHO05D004170 3.5e-18 95.1 93 48.4
Os01g0659900 Oryza sativa ssp. japonica HOM05D003005 ORTHO05D004170 6.0e-18 94.4 112 43.8
QL02p032180 Quercus lobata HOM05D003005 ORTHO05D004170 3.9e-17 91.7 126 44.4
Zm00001eb203860 Zea mays HOM05D003005 ORTHO05D004170 6.7e-17 90.9 112 43.8
Sc23g0002420 Simmondsia chinensis HOM05D003005 ORTHO05D004170 1.5e-16 89.7 69 60.9
A09p53650 Brassica napus HOM05D003005 ORTHO05D004170 1.9e-16 89.4 116 43.1
TWI14G0325 Tripterygium wilfordii HOM05D003005 ORTHO05D004170 2.8e-15 85.5 87 55.2
HPP92_004575 Vanilla planifolia HOM05D003005 ORTHO05D004170 6.3e-15 84.3 116 43.1
Os02g0260200 Oryza sativa ssp. japonica HOM05D003005 ORTHO05D004170 8.2e-15 84.0 112 41.1
Zm00001eb237930 Zea mays HOM05D003005 ORTHO05D004170 5.3e-14 81.3 115 40.9
AUR62019783 Chenopodium quinoa HOM05D003005 ORTHO05D004170 1.5e-13 79.7 99 39.4
Lj2P174T70 Lonicera japonica HOM05D003005 ORTHO05D004170 3.4e-13 78.6 123 38.2
HPP92_020014 Vanilla planifolia HOM05D003005 ORTHO05D004170 3.4e-13 78.6 114 42.1
ECA246G5064 Erigeron canadensis HOM05D003005 ORTHO05D004170 7.6e-13 77.4 84 50.0
EL10Ac5g12860 Beta vulgaris HOM05D003005 ORTHO05D004170 1.0e-12 77.0 90 38.9
AUR62010787 Chenopodium quinoa HOM05D003005 ORTHO05D004170 1.0e-12 77.0 85 38.8
Actinidia28487 Actinidia chinensis HOM05D003005 ORTHO05D004170 6.5e-12 74.3 110 40.0
Lsat_1_v5_gn_3_9721 Lactuca sativa HOM05D003005 ORTHO05D004170 6.5e-12 74.3 80 48.8
unitig_747.g21324 Utricularia gibba HOM05D003005 ORTHO05D004170 5.5e-11 71.2 111 36.0
ECA240G4380 Erigeron canadensis HOM05D003005 ORTHO05D004170 7.2e-11 70.9 108 38.9
HanXRQChr17g0535501 Helianthus annuus HOM05D003005 ORTHO05D004170 7.2e-11 70.9 90 46.7
Lj9E594T0 Lonicera japonica HOM05D003005 ORTHO05D004170 2.1e-10 69.3 70 52.9
SMO304G0062 Selaginella moellendorffii HOM05D003005 ORTHO05D004170 2.5e-08 62.4 67 49.3


User provided reference genes

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