Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu063625.1 Olea europaea HOM05D006216 ORTHO05D007760 8.2e-67 256.9 129 100.0
MSTRG.12426 Avicennia marina HOM05D006216 ORTHO05D007760 6.3e-43 177.6 127 72.4
SGA_v2.0_scaffold79G25547 Striga asiatica HOM05D006216 ORTHO05D007760 1.6e-38 162.9 136 65.4
Peaxi162Scf00050g02022 Petunia axillaris HOM05D006216 ORTHO05D007760 1.3e-35 153.3 127 62.2
MSTRG.21323 Avicennia marina HOM05D006216 ORTHO05D007760 6.3e-35 151.0 127 63.8
Cc01_g07140 Coffea canephora HOM05D006216 ORTHO05D007760 2.4e-34 149.1 128 59.4
Nitab4.5_0002300g0020 Nicotiana tabacum HOM05D006216 ORTHO05D007760 2.7e-33 145.6 128 60.2
Migut.D00703 Erythranthe guttata HOM05D006216 ORTHO05D007760 1.3e-32 143.3 128 60.2
Lj2A825T28 Lonicera japonica HOM05D006216 ORTHO05D007760 2.3e-32 142.5 127 58.3
Dinv29341 Davidia involucrata HOM05D006216 ORTHO05D007760 6.5e-32 141.0 127 58.3
SalBow6G4438 Salvia bowleyana HOM05D006216 ORTHO05D007760 6.5e-32 141.0 126 61.9
CSS0004136 Camellia sinensis var. sinensis HOM05D006216 ORTHO05D007760 1.5e-31 139.8 134 55.2
CAN.G714.2 Capsicum annuum HOM05D006216 ORTHO05D007760 1.2e-30 136.7 127 57.5
Sopen01g004500 Solanum pennellii HOM05D006216 ORTHO05D007760 8.8e-29 130.6 112 59.8
Nn7g37015 Nelumbo nucifera HOM05D006216 ORTHO05D007760 1.2e-28 130.2 126 57.9
Rhsim13G0202500 Rhododendron simsii HOM05D006216 ORTHO05D007760 1.2e-28 130.2 133 54.1
PGSC0003DMG400022703 Solanum tuberosum HOM05D006216 ORTHO05D007760 1.5e-28 129.8 112 60.7
Actinidia07007 Actinidia chinensis HOM05D006216 ORTHO05D007760 9.8e-28 127.1 134 53.0
Solyc01g009010.3 Solanum lycopersicum HOM05D006216 ORTHO05D007760 9.8e-28 127.1 112 58.0
vmacro04357 Vaccinium macrocarpon HOM05D006216 ORTHO05D007760 1.3e-27 126.7 134 53.0
QL01p020730 Quercus lobata HOM05D006216 ORTHO05D007760 4.9e-27 124.8 125 57.6
Haze_23545 Corylus avellana HOM05D006216 ORTHO05D007760 8.3e-27 124.0 125 54.4
Cfa010159 Carpinus fangiana HOM05D006216 ORTHO05D007760 1.1e-26 123.6 127 54.3
VMungo1215G0750 Vigna mungo HOM05D006216 ORTHO05D007760 1.1e-26 123.6 119 57.1
TAR633G2593 Trochodendron aralioides HOM05D006216 ORTHO05D007760 2.4e-26 122.5 127 55.1
Aqoxy1G00047 Aquilegia oxysepala HOM05D006216 ORTHO05D007760 4.1e-26 121.7 127 53.5
Lj6g0023824 Lotus japonicus HOM05D006216 ORTHO05D007760 4.1e-26 121.7 124 53.2
Glyma.13G072700 Glycine max HOM05D006216 ORTHO05D007760 7.0e-26 120.9 127 52.0
Phvul.006G019500 Phaseolus vulgaris HOM05D006216 ORTHO05D007760 7.0e-26 120.9 119 54.6
Hma1.2p1_1843F.1_g305000 Hydrangea macrophylla HOM05D006216 ORTHO05D007760 1.2e-25 120.2 129 52.7
Hma1.2p1_1843F.1_g305010 Hydrangea macrophylla HOM05D006216 ORTHO05D007760 1.2e-25 120.2 129 52.7
GSVIVG01037382001 Vitis vinifera HOM05D006216 ORTHO05D007760 1.2e-25 120.2 124 55.6
CSS0031944 Camellia sinensis var. sinensis HOM05D006216 ORTHO05D007760 1.6e-25 119.8 129 55.0
arahy.Tifrunner.gnm1.ann1.G3L2E7 Arachis hypogaea HOM05D006216 ORTHO05D007760 2.7e-25 119.0 127 53.5
EL10Ac6g13846 Beta vulgaris HOM05D006216 ORTHO05D007760 4.5e-25 118.2 124 52.4
Glyma.20G046800 Glycine max HOM05D006216 ORTHO05D007760 1.7e-24 116.3 124 54.0
PGR119G0354 Punica granatum HOM05D006216 ORTHO05D007760 1.7e-24 116.3 72 77.8
Lsat_1_v5_gn_2_36221 Lactuca sativa HOM05D006216 ORTHO05D007760 2.3e-24 115.9 94 61.7
CiPaw.13G146100 Carya illinoinensis HOM05D006216 ORTHO05D007760 3.8e-24 115.2 125 50.4
PSO339G5720 Papaver somniferum HOM05D006216 ORTHO05D007760 6.6e-24 114.4 128 51.6
Lalb_Chr15g0080191 Lupinus albus HOM05D006216 ORTHO05D007760 1.1e-23 113.6 72 73.6
Os01g0802100 Oryza sativa ssp. japonica HOM05D006216 ORTHO05D007760 1.1e-23 113.6 68 75.0
arahy.Tifrunner.gnm1.ann1.CPM77E Arachis hypogaea HOM05D006216 ORTHO05D007760 1.5e-23 113.2 67 79.1
CDE09G0516 Ceratophyllum demersum HOM05D006216 ORTHO05D007760 1.9e-23 112.8 127 52.0
AUR62024257 Chenopodium quinoa HOM05D006216 ORTHO05D007760 3.3e-23 112.1 127 52.0
Lalb_Chr18g0048331 Lupinus albus HOM05D006216 ORTHO05D007760 3.3e-23 112.1 123 52.0
Sabra16G0133700 Salix brachista HOM05D006216 ORTHO05D007760 3.3e-23 112.1 115 55.7
PSO384G3582 Papaver somniferum HOM05D006216 ORTHO05D007760 4.3e-23 111.7 128 50.0
ECA238G2733 Erigeron canadensis HOM05D006216 ORTHO05D007760 5.6e-23 111.3 123 54.5
HanXRQChr14g0433421 Helianthus annuus HOM05D006216 ORTHO05D007760 5.6e-23 111.3 88 63.6
Medtr3g437340 Medicago truncatula HOM05D006216 ORTHO05D007760 7.3e-23 110.9 76 68.4
CDE08G0663 Ceratophyllum demersum HOM05D006216 ORTHO05D007760 2.1e-22 109.4 128 54.7
Gohir.D07G123300 Gossypium hirsutum HOM05D006216 ORTHO05D007760 2.8e-22 109.0 123 52.8
Hund25392 Selenicereus undatus HOM05D006216 ORTHO05D007760 2.8e-22 109.0 129 49.6
Eucgr.J00662 Eucalyptus grandis HOM05D006216 ORTHO05D007760 3.6e-22 108.6 86 60.5
Potri.009G021800 Populus trichocarpa HOM05D006216 ORTHO05D007760 3.6e-22 108.6 116 56.0
Potri.001G225100 Populus trichocarpa HOM05D006216 ORTHO05D007760 4.7e-22 108.2 128 53.1
ClCG03G014320 Citrullus lanatus HOM05D006216 ORTHO05D007760 6.1e-22 107.8 104 56.7
Thhalv10002004m.g Eutrema salsugineum HOM05D006216 ORTHO05D007760 1.0e-21 107.1 65 72.3
Gohir.A07G119000 Gossypium hirsutum HOM05D006216 ORTHO05D007760 1.0e-21 107.1 123 52.0
MD03G1163100 Malus domestica HOM05D006216 ORTHO05D007760 1.0e-21 107.1 86 65.1
Gorai.001G133000 Gossypium raimondii HOM05D006216 ORTHO05D007760 1.4e-21 106.7 123 52.0
Manes.01G176400 Manihot esculenta HOM05D006216 ORTHO05D007760 1.4e-21 106.7 124 48.4
Atru.chr3.2830 Acer truncatum HOM05D006216 ORTHO05D007760 1.8e-21 106.3 130 51.5
Migut.N02401 Erythranthe guttata HOM05D006216 ORTHO05D007760 1.8e-21 106.3 128 55.5
Sed0006982 Sechium edule HOM05D006216 ORTHO05D007760 1.8e-21 106.3 125 48.8
TPR.G11861 Trifolium pratense HOM05D006216 ORTHO05D007760 1.8e-21 106.3 128 52.3
Aa31LG5G8850 Aethionema arabicum HOM05D006216 ORTHO05D007760 2.3e-21 105.9 64 73.4
CANSAT54G1188 Cannabis sativa HOM05D006216 ORTHO05D007760 2.3e-21 105.9 89 61.8
A07p17910 Brassica napus HOM05D006216 ORTHO05D007760 4.0e-21 105.1 73 68.5
BraA07t29509Z Brassica rapa HOM05D006216 ORTHO05D007760 4.0e-21 105.1 73 68.5
AUR62005484 Chenopodium quinoa HOM05D006216 ORTHO05D007760 4.0e-21 105.1 55 85.5
CsaV3_1G041900 Cucumis sativus L. HOM05D006216 ORTHO05D007760 4.0e-21 105.1 124 51.6
Duzib168G1114 Durio zibethinus HOM05D006216 ORTHO05D007760 4.0e-21 105.1 63 76.2
AT2G26930 Arabidopsis thaliana HOM05D006216 ORTHO05D007760 5.2e-21 104.8 92 58.7
BcaC02g10847 Brassica carinata HOM05D006216 ORTHO05D007760 5.2e-21 104.8 65 70.8
C04p24560 Brassica napus HOM05D006216 ORTHO05D007760 5.2e-21 104.8 65 70.8
BolC4t23960H Brassica oleracea HOM05D006216 ORTHO05D007760 5.2e-21 104.8 65 70.8
Carub.0004s0743 Capsella rubella HOM05D006216 ORTHO05D007760 5.2e-21 104.8 105 53.3
Ciclev10015579m.g Citrus clementina HOM05D006216 ORTHO05D007760 5.2e-21 104.8 64 76.6
MELO3C015605.2 Cucumis melo HOM05D006216 ORTHO05D007760 5.2e-21 104.8 104 54.8
AL4G20170 Arabidopsis lyrata HOM05D006216 ORTHO05D007760 6.8e-21 104.4 64 71.9
CARHR119100 Cardamine hirsuta HOM05D006216 ORTHO05D007760 6.8e-21 104.4 64 71.9
Psat5g182280 Pisum sativum HOM05D006216 ORTHO05D007760 6.8e-21 104.4 130 50.0
Sp4g08430 Schrenkiella parvula HOM05D006216 ORTHO05D007760 8.9e-21 104.0 64 70.3
TWI31G0496 Tripterygium wilfordii HOM05D006216 ORTHO05D007760 8.9e-21 104.0 123 50.4
HPP92_001661 Vanilla planifolia HOM05D006216 ORTHO05D007760 8.9e-21 104.0 72 68.1
Zm00001eb150630 Zea mays HOM05D006216 ORTHO05D007760 8.9e-21 104.0 125 48.0
Thecc.09G251000 Theobroma cacao HOM05D006216 ORTHO05D007760 1.2e-20 103.6 123 51.2
THA.LOC104816956 Tarenaya hassleriana HOM05D006216 ORTHO05D007760 1.5e-20 103.2 122 49.2
TWI75G0612 Tripterygium wilfordii HOM05D006216 ORTHO05D007760 2.0e-20 102.8 127 52.8
Prupe.4G269400 Prunus persica HOM05D006216 ORTHO05D007760 2.6e-20 102.4 95 58.9
Manes.02G134400 Manihot esculenta HOM05D006216 ORTHO05D007760 3.4e-20 102.1 124 48.4
Sc04g0009550 Simmondsia chinensis HOM05D006216 ORTHO05D007760 4.4e-20 101.7 93 54.8
Ca_13675_v3 Cicer arietinum L. HOM05D006216 ORTHO05D007760 5.7e-20 101.3 119 47.9
ATR0782G058 Amborella trichopoda HOM05D006216 ORTHO05D007760 7.5e-20 100.9 68 66.2
BcaB02g10053 Brassica carinata HOM05D006216 ORTHO05D007760 2.2e-19 99.4 123 48.0
MBI19_g37419_MAGBIO Magnolia biondii HOM05D006216 ORTHO05D007760 6.4e-19 97.8 56 75.0
FvH4_3g27650 Fragaria vesca HOM05D006216 ORTHO05D007760 2.4e-18 95.9 62 71.0
FAN11G0826 Fragaria x ananassa HOM05D006216 ORTHO05D007760 2.4e-18 95.9 62 71.0
FAN21G1147 Fragaria x ananassa HOM05D006216 ORTHO05D007760 3.2e-18 95.5 62 71.0
FAN25G0225 Fragaria x ananassa HOM05D006216 ORTHO05D007760 3.2e-18 95.5 62 71.0
RcHm_v2.0_Chr5g0050131 Rosa chinensis HOM05D006216 ORTHO05D007760 1.6e-17 93.2 130 45.4
Atru.BG.104.p Acer truncatum HOM05D006216 ORTHO05D007760 2.7e-17 92.4 53 77.4
FAN26G0546 Fragaria x ananassa HOM05D006216 ORTHO05D010609 3.9e-16 88.6 61 67.2
SEGI_15556 Sequoiadendron giganteum HOM05D006216 ORTHO05D007760 3.3e-15 85.5 70 57.1
Mapoly0033s0031 Marchantia polymorpha HOM05D006216 ORTHO05D007760 7.3e-15 84.3 106 46.2
Pp3c26_490 Physcomitrium patens HOM05D006216 ORTHO05D007760 3.6e-14 82.0 98 45.9
AagrBONN_evm.TU.Sc2ySwM_228.3849 Anthoceros agrestis HOM05D006216 ORTHO05D007760 1.1e-13 80.5 98 46.9
CBR_g22270 Chara braunii HOM05D006216 ORTHO05D007760 2.0e-12 76.3 71 50.7
SMO332G0042 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 3.4e-12 75.5 98 46.9
SMO367G1046 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 4.4e-12 75.1 57 63.2
Nitab4.5_0000428g0050 Nicotiana tabacum HOM05D006216 ORTHO05D007760 1.7e-11 73.2 128 42.2
DCAR_006327 Daucus carota HOM05D006216 ORTHO05D007760 4.9e-11 71.6 102 42.2
unitig_27.g25131 Utricularia gibba HOM05D006216 ORTHO05D007760 6.0e-09 64.7 131 38.9
PRCOL_00004294 Prasinoderma coloniale HOM05D006216 ORTHO05D007760 2.3e-08 62.8 36 75.0
Cre02.g145050 Chlamydomonas reinhardtii HOM05D006216 ORTHO05D007760 5.6e-07 58.2 41 63.4
MCO08G209 Micromonas commoda HOM05D006216 ORTHO05D007760 4.7e-06 55.1 29 75.9


User provided reference genes

Program Settings