Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu063592.1 Olea europaea HOM05D005212 ORTHO05D006353 2.8e-199 698.4 345 100.0
Oeu014050.1 Olea europaea HOM05D005212 ORTHO05D006353 8.2e-130 467.6 274 83.6
Peaxi162Scf00723g00423 Petunia axillaris HOM05D005212 ORTHO05D006353 8.0e-93 344.7 305 58.4
SalBow2G0696 Salvia bowleyana HOM05D005212 ORTHO05D006353 3.0e-92 342.8 273 65.9
Solyc04g007850.3 Solanum lycopersicum HOM05D005212 ORTHO05D006353 4.0e-92 342.4 288 61.5
Sopen04g002980 Solanum pennellii HOM05D005212 ORTHO05D006353 6.8e-92 341.7 288 61.8
Dinv36246 Davidia involucrata HOM05D005212 ORTHO05D006353 4.4e-91 339.0 270 65.9
Migut.E00446 Erythranthe guttata HOM05D005212 ORTHO05D006353 1.7e-90 337.0 275 64.0
CiPaw.05G194300 Carya illinoinensis HOM05D005212 ORTHO05D006353 4.8e-90 335.5 308 57.5
GSVIVG01023834001 Vitis vinifera HOM05D005212 ORTHO05D006353 3.5e-88 329.3 294 60.2
CAN.G458.6 Capsicum annuum HOM05D005212 ORTHO05D006353 4.5e-88 328.9 289 61.2
Prupe.8G002300 Prunus persica HOM05D005212 ORTHO05D006353 4.5e-88 328.9 281 60.9
Haze_10945 Corylus avellana HOM05D005212 ORTHO05D006353 7.7e-88 328.2 297 57.2
Lj3C867T4 Lonicera japonica HOM05D005212 ORTHO05D006353 1.7e-87 327.0 296 58.1
CSS0012951 Camellia sinensis var. sinensis HOM05D005212 ORTHO05D006353 3.8e-87 325.9 292 57.5
GSVIVG01011709001 Vitis vinifera HOM05D005212 ORTHO05D006353 8.5e-87 324.7 294 59.9
Prupe.1G329700 Prunus persica HOM05D005212 ORTHO05D006353 2.5e-86 323.2 288 59.7
SGA_v2.0_scaffold39G15210 Striga asiatica HOM05D005212 ORTHO05D006353 5.5e-86 322.0 278 59.7
Nitab4.5_0009115g0010 Nicotiana tabacum HOM05D005212 ORTHO05D006353 7.2e-86 321.6 288 59.4
Rhsim09G0094100 Rhododendron simsii HOM05D005212 ORTHO05D006353 9.5e-86 321.2 278 60.4
Gohir.D09G202000 Gossypium hirsutum HOM05D005212 ORTHO05D006353 1.2e-85 320.9 290 56.6
Gorai.013G143600 Gossypium raimondii HOM05D005212 ORTHO05D006353 1.2e-85 320.9 290 56.6
Gohir.D13G128200 Gossypium hirsutum HOM05D005212 ORTHO05D006353 1.6e-85 320.5 290 56.6
QL03p033836 Quercus lobata HOM05D005212 ORTHO05D006353 1.6e-85 320.5 285 59.3
Gohir.A13G124600 Gossypium hirsutum HOM05D005212 ORTHO05D006353 2.8e-85 319.7 283 56.9
Lalb_Chr07g0187701 Lupinus albus HOM05D005212 ORTHO05D006353 3.6e-85 319.3 285 58.6
Gorai.006G225800 Gossypium raimondii HOM05D005212 ORTHO05D006353 4.7e-85 318.9 290 56.2
MSTRG.13603 Avicennia marina HOM05D005212 ORTHO05D006353 1.8e-84 317.0 232 69.0
Atru.chr12.1198 Acer truncatum HOM05D005212 ORTHO05D006353 3.0e-84 316.2 291 57.4
Duzib151G1103 Durio zibethinus HOM05D005212 ORTHO05D006353 8.8e-84 314.7 290 55.9
Ca_24783_v3 Cicer arietinum L. HOM05D005212 ORTHO05D006353 1.5e-83 313.9 288 56.2
PGR102G0858 Punica granatum HOM05D005212 ORTHO05D006353 1.5e-83 313.9 280 58.2
Duzib268G0887 Durio zibethinus HOM05D005212 ORTHO05D006353 2.0e-83 313.5 286 57.0
Nn3g18288 Nelumbo nucifera HOM05D005212 ORTHO05D006353 5.7e-83 312.0 282 58.5
Gohir.A09G208525 Gossypium hirsutum HOM05D005212 ORTHO05D006353 7.5e-83 311.6 294 55.4
PGSC0003DMG400029477 Solanum tuberosum HOM05D005212 ORTHO05D006353 1.7e-82 310.5 263 59.7
Thecc.04G190200 Theobroma cacao HOM05D005212 ORTHO05D006353 4.9e-82 308.9 290 56.9
TPR.G5141 Trifolium pratense HOM05D005212 ORTHO05D006353 1.8e-81 307.0 288 55.9
Hma1.2p1_0060F.1_g032750 Hydrangea macrophylla HOM05D005212 ORTHO05D006353 9.2e-81 304.7 271 59.4
Ca_01441_v3 Cicer arietinum L. HOM05D005212 ORTHO05D006353 4.5e-80 302.4 294 53.7
Psat7g082520 Pisum sativum HOM05D005212 ORTHO05D006353 4.5e-80 302.4 292 56.5
TWI60G0083 Tripterygium wilfordii HOM05D005212 ORTHO05D006353 5.9e-80 302.0 287 56.1
TPR.G18569 Trifolium pratense HOM05D005212 ORTHO05D006353 7.8e-80 301.6 288 55.2
HanXRQChr12g0363921 Helianthus annuus HOM05D005212 ORTHO05D006353 1.0e-79 301.2 289 55.0
Potri.001G461100 Populus trichocarpa HOM05D005212 ORTHO05D006353 1.0e-79 301.2 289 55.7
Medtr3g096970 Medicago truncatula HOM05D005212 ORTHO05D006353 1.3e-79 300.8 287 56.1
RcHm_v2.0_Chr3g0448371 Rosa chinensis HOM05D005212 ORTHO05D006353 1.3e-79 300.8 283 56.9
vmacro10659 Vaccinium macrocarpon HOM05D005212 ORTHO05D006353 1.7e-79 300.4 278 57.2
Medtr3g088850 Medicago truncatula HOM05D005212 ORTHO05D006353 3.8e-79 299.3 289 55.4
HanXRQChr08g0212231 Helianthus annuus HOM05D005212 ORTHO05D006353 6.6e-79 298.5 288 54.5
Manes.17G080300 Manihot esculenta HOM05D005212 ORTHO05D006353 1.1e-78 297.7 282 54.6
Ciclev10028815m.g Citrus clementina HOM05D005212 ORTHO05D006353 1.9e-78 297.0 291 55.7
Lj4g0012207 Lotus japonicus HOM05D005212 ORTHO05D006353 5.6e-78 295.4 290 56.2
MD16G1023100 Malus domestica HOM05D005212 ORTHO05D006353 9.5e-78 294.7 253 62.5
Ciclev10017606m.g Citrus clementina HOM05D005212 ORTHO05D006353 1.6e-77 293.9 283 58.3
RcHm_v2.0_Chr4g0443611 Rosa chinensis HOM05D005212 ORTHO05D006353 4.7e-77 292.4 284 56.0
FvH4_4g34100 Fragaria vesca HOM05D005212 ORTHO05D006353 3.0e-76 289.7 283 54.4
THA.LOC104816387 Tarenaya hassleriana HOM05D005212 ORTHO05D006353 4.0e-76 289.3 294 54.1
ECA233G1697 Erigeron canadensis HOM05D005212 ORTHO05D006353 5.2e-76 288.9 291 54.6
DCAR_014725 Daucus carota HOM05D005212 ORTHO05D006353 6.8e-76 288.5 276 55.1
Glyma.08G095400 Glycine max HOM05D005212 ORTHO05D006353 6.8e-76 288.5 284 55.6
Sabra16G0312600 Salix brachista HOM05D005212 ORTHO05D006353 2.9e-74 283.1 317 50.2
Phvul.005G028500 Phaseolus vulgaris HOM05D005212 ORTHO05D006353 4.1e-73 279.3 300 51.7
Aqoxy7G01425 Aquilegia oxysepala HOM05D005212 ORTHO05D006353 5.4e-73 278.9 272 55.9
Sc10g0005560 Simmondsia chinensis HOM05D005212 ORTHO05D006353 5.4e-73 278.9 295 53.2
EL10Ac9g21945 Beta vulgaris HOM05D005212 ORTHO05D006353 5.9e-72 275.4 292 51.4
Dinv28041 Davidia involucrata HOM05D005212 ORTHO05D006353 1.0e-71 274.6 249 60.2
CARHR139690 Cardamine hirsuta HOM05D005212 ORTHO05D006353 1.3e-71 274.2 295 51.9
Eucgr.H01942 Eucalyptus grandis HOM05D005212 ORTHO05D006353 1.7e-71 273.9 300 53.0
Thhalv10001552m.g Eutrema salsugineum HOM05D005212 ORTHO05D006353 6.6e-71 271.9 288 52.8
Lsat_1_v5_gn_4_8681 Lactuca sativa HOM05D005212 ORTHO05D006353 6.6e-71 271.9 285 52.3
AL4G43530 Arabidopsis lyrata HOM05D005212 ORTHO05D006353 1.5e-70 270.8 293 50.9
FAN12G1848 Fragaria x ananassa HOM05D005212 ORTHO05D006353 2.5e-70 270.0 310 48.7
A04p33360 Brassica napus HOM05D000073 ORTHO05D006698 3.3e-70 269.6 287 50.5
BraA04t18796Z Brassica rapa HOM05D000073 ORTHO05D000033 3.3e-70 269.6 287 50.5
Sp4g26600 Schrenkiella parvula HOM05D005212 ORTHO05D006353 1.2e-69 267.7 292 50.7
Carub.0004s2707 Capsella rubella HOM05D005212 ORTHO05D006353 2.8e-69 266.5 295 50.2
Sed0020748 Sechium edule HOM05D005212 ORTHO05D006353 2.8e-69 266.5 292 52.7
CsaV3_5G028340 Cucumis sativus L. HOM05D005212 ORTHO05D006353 3.6e-69 266.2 296 53.0
FAN22G0397 Fragaria x ananassa HOM05D005212 ORTHO05D006353 8.0e-69 265.0 316 48.4
AT2G44510 Arabidopsis thaliana HOM05D005212 ORTHO05D006353 1.1e-68 264.6 294 50.0
BcaC02g07097 Brassica carinata HOM05D005212 ORTHO05D006353 8.9e-68 261.5 287 49.5
C04p71050 Brassica napus HOM05D000073 ORTHO05D006698 8.9e-68 261.5 287 49.5
BolC4t28609H Brassica oleracea HOM05D000073 ORTHO05D006353 8.9e-68 261.5 287 49.5
CANSAT01G1481 Cannabis sativa HOM05D005212 ORTHO05D006353 1.5e-67 260.8 286 50.7
Aa31LG1G21440 Aethionema arabicum HOM05D005212 ORTHO05D006353 4.4e-67 259.2 297 47.1
FAN17G0532 Fragaria x ananassa HOM05D005212 ORTHO05D006353 9.8e-67 258.1 296 49.0
FAN07G0183 Fragaria x ananassa HOM05D005212 ORTHO05D006353 4.9e-66 255.8 229 56.8
Sed0012238 Sechium edule HOM05D005212 ORTHO05D006353 6.4e-66 255.4 258 53.1
ClCG01G006340 Citrullus lanatus HOM05D005212 ORTHO05D006353 8.3e-66 255.0 338 46.4
Manes.15G130900 Manihot esculenta HOM05D005212 ORTHO05D006353 1.9e-65 253.8 285 49.8
BcaB06g29383 Brassica carinata HOM05D005212 ORTHO05D006353 5.4e-65 252.3 287 47.7
Ah.11g044490 Amaranthus hybridus HOM05D005212 ORTHO05D006353 6.6e-63 245.4 293 46.1
VMungo1080G0912 Vigna mungo HOM05D005212 ORTHO05D006353 1.5e-62 244.2 280 50.7
MELO3C005296.2 Cucumis melo HOM05D005212 ORTHO05D006353 2.0e-59 233.8 244 54.9
HPP92_020815 Vanilla planifolia HOM05D005212 ORTHO05D006353 7.5e-59 231.9 291 47.4
Hund05206 Selenicereus undatus HOM05D005212 ORTHO05D006353 1.7e-58 230.7 272 48.2
AUR62008760 Chenopodium quinoa HOM05D005212 ORTHO05D006353 1.1e-57 228.0 292 45.5
PSO384G3589 Papaver somniferum HOM05D005212 ORTHO05D006353 3.2e-57 226.5 215 56.3
PSO339G5759 Papaver somniferum HOM05D005212 ORTHO05D006353 4.1e-57 226.1 217 56.2
ATR0829G227 Amborella trichopoda HOM05D005212 ORTHO05D006353 5.4e-57 225.7 270 47.8
Zm00001eb210590 Zea mays HOM05D005212 ORTHO05D006353 5.4e-57 225.7 243 50.2
Ca_09937_v3 Cicer arietinum L. HOM05D005212 ORTHO05D006353 1.2e-56 224.6 218 55.5
Ca_09949_v3 Cicer arietinum L. HOM05D005212 ORTHO05D006353 1.2e-56 224.6 218 55.5
Os03g0853900 Oryza sativa ssp. japonica HOM05D005212 ORTHO05D006353 1.2e-56 224.6 226 50.0
PSO478G2757 Papaver somniferum HOM05D005212 ORTHO05D006353 8.6e-55 218.4 291 45.0
PSO017G4317 Papaver somniferum HOM05D005212 ORTHO05D006353 1.9e-54 217.2 290 45.5
Thhalv10014438m.g Eutrema salsugineum HOM05D005212 ORTHO05D006353 8.9e-52 208.4 227 52.0
AUR62014219 Chenopodium quinoa HOM05D005212 ORTHO05D006353 1.2e-51 208.0 271 43.9
BcaC01g05169 Brassica carinata HOM05D005212 ORTHO05D006353 8.4e-50 201.8 223 52.9
Mapoly0006s0099 Marchantia polymorpha HOM05D005212 ORTHO05D006353 2.7e-48 196.8 235 44.3
AUR62025478 Chenopodium quinoa HOM05D005212 ORTHO05D006353 1.7e-47 194.1 169 56.8
Cc04_g08850 Coffea canephora HOM05D005212 ORTHO05D006353 5.6e-46 189.1 135 70.4
Pp3c25_10280 Physcomitrium patens HOM05D005212 ORTHO05D006353 7.3e-46 188.7 238 42.4
SMO334G0102 Selaginella moellendorffii HOM05D005212 ORTHO05D006353 1.4e-44 184.5 205 45.9
AagrBONN_evm.TU.Sc2ySwM_344.3756 Anthoceros agrestis HOM05D005212 ORTHO05D006353 6.9e-44 182.2 249 39.4
AUR62018080 Chenopodium quinoa HOM05D005212 ORTHO05D006353 2.6e-43 180.3 206 45.1
BolC3t15307H Brassica oleracea HOM05D005212 ORTHO05D006353 6.0e-40 169.1 169 55.0
AUR62014218 Chenopodium quinoa HOM05D005212 ORTHO05D006353 7.8e-40 168.7 188 48.4
AT5G03830 Arabidopsis thaliana HOM05D005212 ORTHO05D006353 1.5e-38 164.5 243 43.6
CDE04G0882 Ceratophyllum demersum HOM05D005212 ORTHO05D006353 1.9e-38 164.1 138 57.2
unitig_22.g5595 Utricularia gibba HOM05D005212 ORTHO05D006353 9.6e-38 161.8 154 55.2
AL6G13400 Arabidopsis lyrata HOM05D005212 ORTHO05D006353 1.3e-37 161.4 172 52.9
Cpa.g.sc1084.4 Carica papaya HOM05D005212 ORTHO05D006353 4.8e-37 159.5 121 62.8
CiPaw.06G048200 Carya illinoinensis HOM05D005212 ORTHO05D006353 1.5e-35 154.5 195 47.7
BcaNung07052 Brassica carinata HOM05D005212 ORTHO05D006353 2.6e-35 153.7 287 35.5
Hund24107 Selenicereus undatus HOM05D005212 ORTHO05D006353 1.2e-32 144.8 125 59.2
C03p29590 Brassica napus HOM05D005212 ORTHO05D006353 4.6e-32 142.9 174 48.9
COL.COLO4_35970 Corchorus olitorius HOM05D005212 ORTHO05D006353 1.3e-31 141.4 137 53.3
BcaB01g03308 Brassica carinata HOM05D005212 ORTHO05D006353 6.7e-31 139.0 231 38.5
Cc04_g08860 Coffea canephora HOM05D005212 ORTHO05D006353 3.3e-30 136.7 145 53.1
MCO05G230 Micromonas commoda HOM05D005212 ORTHO05D006353 4.8e-29 132.9 208 38.5
SEGI_04595 Sequoiadendron giganteum HOM05D005212 ORTHO05D006353 1.8e-28 131.0 149 47.0
CBR_g30204 Chara braunii HOM05D000019 ORTHO05D000353 6.9e-28 129.0 146 44.5
unitig_22.g5596 Utricularia gibba HOM05D005212 ORTHO05D006353 9.9e-27 125.2 88 71.6
Thhalv10015472m.g Eutrema salsugineum HOM05D005212 ORTHO05D006353 1.1e-22 111.7 152 44.7
Cre03.g200991 Chlamydomonas reinhardtii HOM05D005212 ORTHO05D006353 1.9e-22 110.9 265 29.4
Peaxi162Scf00376g00010 Petunia axillaris HOM05D005212 ORTHO05D006353 1.2e-19 101.7 176 35.8
Sabra11G0142300 Salix brachista HOM05D005212 ORTHO05D006353 1.1e-17 95.1 59 71.2
AUR62014216 Chenopodium quinoa HOM05D005212 ORTHO05D006353 3.2e-17 93.6 197 34.0
Aqoxy6G02632 Aquilegia oxysepala HOM05D005212 ORTHO05D006353 3.0e-15 87.0 65 69.2
Cfa023609 Carpinus fangiana HOM05D005212 ORTHO05D006353 2.5e-14 84.0 174 28.7
PRCOL_00004527 Prasinoderma coloniale HOM05D005212 ORTHO05D006353 5.1e-07 59.7 211 28.0
Ca_15863_v3 Cicer arietinum L. HOM05D000681 ORTHO05D011778 1.5e-06 58.2 59 50.8


User provided reference genes

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