Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu063578.1 Olea europaea HOM05D006041 ORTHO05D007473 3.2e-173 611.7 316 100.0
Oeu016281.1 Olea europaea HOM05D006041 ORTHO05D007473 5.2e-131 471.5 302 83.4
Hma1.2p1_0089F.1_g045430 Hydrangea macrophylla HOM05D006041 ORTHO05D007473 1.3e-86 323.9 312 59.6
SalBow2G0340 Salvia bowleyana HOM05D006041 ORTHO05D007473 5.1e-86 322.0 302 59.3
Cc11_g08020 Coffea canephora HOM05D006041 ORTHO05D007473 4.0e-83 312.4 307 58.3
Dinv26256 Davidia involucrata HOM05D006041 ORTHO05D007473 8.4e-81 304.7 308 57.5
MSTRG.2140 Avicennia marina HOM05D006041 ORTHO05D007473 3.2e-80 302.8 314 56.4
Haze_10912 Corylus avellana HOM05D006041 ORTHO05D007473 2.8e-76 289.7 311 53.1
Haze_10913 Corylus avellana HOM05D006041 ORTHO05D007473 2.8e-76 289.7 311 53.1
Cfa015002 Carpinus fangiana HOM05D006041 ORTHO05D007473 4.8e-76 288.9 311 52.4
Lj6A740T67 Lonicera japonica HOM05D006041 ORTHO05D007473 8.1e-76 288.1 309 54.4
Dinv18641 Davidia involucrata HOM05D006041 ORTHO05D007473 3.4e-74 282.7 333 52.3
vmacro00556 Vaccinium macrocarpon HOM05D006041 ORTHO05D007473 2.9e-73 279.6 311 53.7
AUR62003915 Chenopodium quinoa HOM05D006041 ORTHO05D007473 3.8e-73 279.3 330 51.8
RcHm_v2.0_Chr4g0443331 Rosa chinensis HOM05D006041 ORTHO05D007473 8.4e-73 278.1 311 51.8
Rhsim09G0037900 Rhododendron simsii HOM05D006041 ORTHO05D007473 1.4e-72 277.3 320 52.5
QL03p034952 Quercus lobata HOM05D006041 ORTHO05D007473 1.9e-72 276.9 326 52.1
Lsat_1_v5_gn_8_45641 Lactuca sativa HOM05D006041 ORTHO05D007473 4.2e-72 275.8 305 53.8
SGA_v2.0_scaffold139G35400 Striga asiatica HOM05D006041 ORTHO05D007473 4.2e-72 275.8 317 53.0
COL.COLO4_16567 Corchorus olitorius HOM05D006041 ORTHO05D007473 7.1e-72 275.0 318 54.7
Migut.E00465 Erythranthe guttata HOM05D006041 ORTHO05D007473 9.3e-72 274.6 304 54.3
TWI74G1002 Tripterygium wilfordii HOM05D006041 ORTHO05D007473 9.3e-72 274.6 310 51.9
Solyc01g005430.3 Solanum lycopersicum HOM05D006041 ORTHO05D007473 1.6e-71 273.9 302 55.3
CSS0021041 Camellia sinensis var. sinensis HOM05D006041 ORTHO05D007473 2.1e-71 273.5 310 53.2
CSS0021655 Camellia sinensis var. sinensis HOM05D006041 ORTHO05D007473 2.1e-71 273.5 310 53.2
Cpa.g.c27573.2 Carica papaya HOM05D006041 ORTHO05D007473 2.1e-71 273.5 316 52.8
CiPaw.05G190300 Carya illinoinensis HOM05D006041 ORTHO05D007473 4.6e-71 272.3 307 51.1
DCAR_007323 Daucus carota HOM05D006041 ORTHO05D007473 1.3e-70 270.8 306 51.6
PGSC0003DMG400032118 Solanum tuberosum HOM05D006041 ORTHO05D007473 1.8e-70 270.4 302 54.0
Nitab4.5_0009602g0010 Nicotiana tabacum HOM05D006041 ORTHO05D007473 3.9e-70 269.2 303 55.1
Nitab4.5_0000238g0060 Nicotiana tabacum HOM05D006041 ORTHO05D007473 6.7e-70 268.5 308 53.9
Duzib268G1057 Durio zibethinus HOM05D006041 ORTHO05D007473 1.1e-69 267.7 317 53.3
Sc03g0001760 Simmondsia chinensis HOM05D006041 ORTHO05D007473 1.5e-69 267.3 335 49.6
Gorai.005G158800 Gossypium raimondii HOM05D006041 ORTHO05D007473 1.9e-69 266.9 319 52.7
Actinidia34032 Actinidia chinensis HOM05D006041 ORTHO05D007473 9.6e-69 264.6 297 53.2
Manes.15G133200 Manihot esculenta HOM05D006041 ORTHO05D007473 9.6e-69 264.6 310 52.6
CsaV3_5G028000 Cucumis sativus L. HOM05D006041 ORTHO05D007473 1.6e-68 263.8 310 51.0
Duzib251G0740 Durio zibethinus HOM05D006041 ORTHO05D007473 1.6e-68 263.8 316 50.6
Phvul.002G319700 Phaseolus vulgaris HOM05D006041 ORTHO05D007473 2.1e-68 263.5 316 50.9
Sabra08G0102300 Salix brachista HOM05D006041 ORTHO05D007473 2.1e-68 263.5 325 52.6
Nn4g24305 Nelumbo nucifera HOM05D006041 ORTHO05D007473 2.8e-68 263.1 307 51.5
Gohir.D02G141500 Gossypium hirsutum HOM05D006041 ORTHO05D007473 6.2e-68 261.9 321 51.7
Peaxi162Scf00655g00023 Petunia axillaris HOM05D006041 ORTHO05D007473 1.1e-67 261.2 292 55.8
Sopen01g001440 Solanum pennellii HOM05D006041 ORTHO05D007473 1.1e-67 261.2 302 52.6
MELO3C005281.2 Cucumis melo HOM05D006041 ORTHO05D007473 1.4e-67 260.8 303 50.8
Lalb_Chr05g0222281 Lupinus albus HOM05D006041 ORTHO05D007473 1.4e-67 260.8 317 50.8
ClCG01G006460 Citrullus lanatus HOM05D006041 ORTHO05D007473 1.8e-67 260.4 313 50.2
Potri.008G133700 Populus trichocarpa HOM05D006041 ORTHO05D007473 2.4e-67 260.0 321 50.2
HanXRQChr08g0212441 Helianthus annuus HOM05D006041 ORTHO05D007473 4.0e-67 259.2 304 52.0
Gohir.A03G117900 Gossypium hirsutum HOM05D006041 ORTHO05D007473 9.0e-67 258.1 318 50.9
Ciclev10015068m.g Citrus clementina HOM05D006041 ORTHO05D007473 3.4e-66 256.1 325 47.4
Prupe.1G331600 Prunus persica HOM05D006041 ORTHO05D007473 7.6e-66 255.0 322 50.3
EL10Ac6g15713 Beta vulgaris HOM05D006041 ORTHO05D007473 1.0e-65 254.6 336 46.7
Thecc.02G290600 Theobroma cacao HOM05D006041 ORTHO05D007473 1.0e-65 254.6 315 51.7
ECA233G3443 Erigeron canadensis HOM05D006041 ORTHO05D007473 2.2e-65 253.4 319 50.8
MD13G1029800 Malus domestica HOM05D006041 ORTHO05D007473 4.9e-65 252.3 323 49.5
PGR142G4228 Punica granatum HOM05D006041 ORTHO05D007473 4.9e-65 252.3 315 49.5
VMungo0251G2799 Vigna mungo HOM05D006041 ORTHO05D007473 6.5e-65 251.9 319 48.9
TAR371G0590 Trochodendron aralioides HOM05D006041 ORTHO05D007473 8.4e-65 251.5 315 48.6
AL5G10750 Arabidopsis lyrata HOM05D006041 ORTHO05D007473 1.1e-64 251.1 320 49.7
Eucgr.G02114 Eucalyptus grandis HOM05D006041 ORTHO05D007473 1.4e-64 250.8 314 49.7
Medtr8g104930 Medicago truncatula HOM05D006041 ORTHO05D007473 2.5e-64 250.0 313 47.9
TAR629G0174 Trochodendron aralioides HOM05D006041 ORTHO05D007473 2.5e-64 250.0 323 48.9
MD16G1020600 Malus domestica HOM05D006041 ORTHO05D007473 5.5e-64 248.8 320 48.8
AUR62038228 Chenopodium quinoa HOM05D006041 ORTHO05D007473 7.1e-64 248.4 311 50.5
FvH4_4g33820 Fragaria vesca HOM05D006041 ORTHO05D007473 9.3e-64 248.1 309 49.5
Atru.chr11.510 Acer truncatum HOM05D006041 ORTHO05D007473 4.6e-63 245.7 316 47.8
AT2G01650 Arabidopsis thaliana HOM05D006041 ORTHO05D007473 1.3e-62 244.2 303 49.2
FAN12G3784 Fragaria x ananassa HOM05D006041 ORTHO05D007473 6.7e-62 241.9 309 49.2
Lj4g0006027 Lotus japonicus HOM05D006041 ORTHO05D007473 1.1e-61 241.1 315 46.7
FAN17G0347 Fragaria x ananassa HOM05D006041 ORTHO05D007473 2.5e-61 240.0 309 48.5
Gohir.A01G147900 Gossypium hirsutum HOM05D006041 ORTHO05D007473 2.5e-61 240.0 309 50.2
FAN22G1094 Fragaria x ananassa HOM05D006041 ORTHO05D007473 4.3e-61 239.2 309 48.2
CAN.G1130.10 Capsicum annuum HOM05D006041 ORTHO05D007473 5.7e-61 238.8 339 47.2
Thhalv10004151m.g Eutrema salsugineum HOM05D006041 ORTHO05D007473 1.3e-60 237.7 314 47.8
Manes.17G082400 Manihot esculenta HOM05D006041 ORTHO05D007473 1.3e-60 237.7 302 49.3
MBI19_g21093_MAGBIO Magnolia biondii HOM05D006041 ORTHO05D007473 4.8e-60 235.7 306 46.7
Carub.0005s0060 Capsella rubella HOM05D006041 ORTHO05D007473 6.2e-60 235.3 305 47.5
unitig_27.g25310 Utricularia gibba HOM05D006041 ORTHO05D007473 2.4e-59 233.4 313 46.3
Glyma.08G042900 Glycine max HOM05D006041 ORTHO05D007473 3.1e-59 233.0 313 46.0
PSO478G4621 Papaver somniferum HOM05D006041 ORTHO05D007473 3.1e-59 233.0 311 46.6
PSO017G0247 Papaver somniferum HOM05D006041 ORTHO05D007473 6.9e-59 231.9 311 47.9
THA.LOC104805081 Tarenaya hassleriana HOM05D006041 ORTHO05D007473 2.0e-58 230.3 319 47.6
Glyma.05G235400 Glycine max HOM05D006041 ORTHO05D007473 2.6e-58 229.9 314 46.2
Sp2g13100 Schrenkiella parvula HOM05D006041 ORTHO05D007473 3.4e-58 229.6 313 45.7
Aa31LG2G8250 Aethionema arabicum HOM05D006041 ORTHO05D007473 1.3e-57 227.6 309 47.6
TPR.G32714 Trifolium pratense HOM05D006041 ORTHO05D007473 2.2e-57 226.9 215 54.0
BcaC06g34139 Brassica carinata HOM05D006041 ORTHO05D007473 2.9e-57 226.5 313 47.0
BolC7t43765H Brassica oleracea HOM05D006041 ORTHO05D007473 2.9e-57 226.5 313 47.0
Ca_17289_v3 Cicer arietinum L. HOM05D006041 ORTHO05D007473 2.9e-57 226.5 314 45.2
Ah.03g145700 Amaranthus hybridus HOM05D006041 ORTHO05D007473 3.8e-57 226.1 329 44.1
C07p32270 Brassica napus HOM05D006041 ORTHO05D007473 3.8e-57 226.1 313 47.3
Psat7g009240 Pisum sativum HOM05D006041 ORTHO05D007473 6.5e-57 225.3 314 45.5
Gohir.D01G141100 Gossypium hirsutum HOM05D006041 ORTHO05D007473 1.4e-56 224.2 312 47.4
Gorai.002G173400 Gossypium raimondii HOM05D006041 ORTHO05D007473 1.4e-56 224.2 312 47.4
arahy.Tifrunner.gnm1.ann1.IVEQ23 Arachis hypogaea HOM05D006041 ORTHO05D007473 2.5e-56 223.4 305 44.9
arahy.Tifrunner.gnm1.ann1.BAL5EB Arachis hypogaea HOM05D006041 ORTHO05D007473 7.1e-56 221.9 308 44.8
BcaC06g31287 Brassica carinata HOM05D006041 ORTHO05D007473 2.7e-55 219.9 302 46.7
CANSAT01G0691 Cannabis sativa HOM05D006041 ORTHO05D007473 7.9e-55 218.4 310 45.2
Sed0013468 Sechium edule HOM05D006041 ORTHO05D007473 1.3e-54 217.6 236 48.3
CARHR144220 Cardamine hirsuta HOM05D006041 ORTHO05D007473 6.7e-54 215.3 314 45.5
A06p44210 Brassica napus HOM05D006041 ORTHO05D007473 2.8e-52 209.9 305 46.6
BraA06t27296Z Brassica rapa HOM05D006041 ORTHO05D007473 4.8e-52 209.1 304 46.1
ATR0753G012 Amborella trichopoda HOM05D006041 ORTHO05D007473 5.3e-51 205.7 314 42.7
SGA_v2.0_scaffold151G36758 Striga asiatica HOM05D006041 ORTHO05D007473 5.5e-48 195.7 237 49.8
Sed0015632 Sechium edule HOM05D006041 ORTHO05D007473 1.6e-47 194.1 302 43.0
CDE07G0862 Ceratophyllum demersum HOM05D006041 ORTHO05D007473 2.1e-47 193.7 311 43.7
SGA_v2.0_scaffold151G36726 Striga asiatica HOM05D006041 ORTHO05D007473 7.9e-47 191.8 203 51.2
SEGI_21307 Sequoiadendron giganteum HOM05D006041 ORTHO05D007473 3.3e-45 186.4 311 39.5
Lalb_Chr16g0387681 Lupinus albus HOM05D006041 ORTHO05D007473 1.3e-44 184.5 319 42.6
CDE06G1197 Ceratophyllum demersum HOM05D006041 ORTHO05D007473 2.0e-37 160.6 306 38.9
Aqoxy3G00037 Aquilegia oxysepala HOM05D006041 ORTHO05D007473 1.8e-30 137.5 331 34.4
Psat7g181280 Pisum sativum HOM05D006041 ORTHO05D007473 5.3e-27 125.9 140 48.6
Actinidia25876 Actinidia chinensis HOM05D001822 ORTHO05D001744 5.0e-25 119.4 111 55.0
CAN.G3.6 Capsicum annuum HOM05D006041 ORTHO05D007473 2.5e-24 117.1 98 63.3
arahy.Tifrunner.gnm1.ann1.I8TFGP Arachis hypogaea HOM05D006041 ORTHO05D007473 4.2e-24 116.3 127 48.0
Zm00001eb099250 Zea mays HOM05D006041 ORTHO05D007473 8.0e-23 112.1 311 32.5
Mapoly0081s0058 Marchantia polymorpha HOM05D006041 ORTHO05D007473 5.7e-21 105.9 403 27.8
Zm00001eb312180 Zea mays HOM05D006041 ORTHO05D007473 2.2e-20 104.0 286 32.2
QL10p059701 Quercus lobata HOM05D006041 ORTHO05D007473 3.7e-20 103.2 182 40.7
CBR_g3474 Chara braunii HOM05D006041 ORTHO05D007473 1.7e-12 77.8 130 32.3
Cre02.g116650 Chlamydomonas reinhardtii HOM05D034198 ORTHO05D034480 8.0e-07 58.9 90 34.4
RcHm_v2.0_Chr6g0284441 Rosa chinensis HOM05D002747 ORTHO05D003069 8.0e-07 58.9 62 41.9
TWI18G0343 Tripterygium wilfordii HOM05D002747 ORTHO05D003069 1.8e-06 57.8 63 41.3
Ciclev10021209m.g Citrus clementina HOM05D002747 ORTHO05D003069 2.3e-06 57.4 69 42.0
COL.COLO4_15646 Corchorus olitorius HOM05D002747 ORTHO05D003069 2.3e-06 57.4 94 35.1
FAN15G0280 Fragaria x ananassa HOM05D002747 ORTHO05D003069 2.3e-06 57.4 108 31.5
Aqoxy4G01147 Aquilegia oxysepala HOM05D006041 ORTHO05D007473 3.0e-06 57.0 90 53.3
FvH4_2g18750 Fragaria vesca HOM05D002747 ORTHO05D003069 4.0e-06 56.6 62 38.7
FAN24G0431 Fragaria x ananassa HOM05D002747 ORTHO05D003069 4.0e-06 56.6 62 38.7
FAN27G3095 Fragaria x ananassa HOM05D002747 ORTHO05D003069 4.0e-06 56.6 62 38.7
RcHm_v2.0_Chr6g0284421 Rosa chinensis HOM05D002747 ORTHO05D003069 5.2e-06 56.2 58 43.1
Lj3g0012882 Lotus japonicus HOM05D002747 ORTHO05D003069 6.8e-06 55.8 51 45.1
GSVIVG01003278001 Vitis vinifera HOM05D002747 ORTHO05D003069 6.8e-06 55.8 62 40.3
CANSAT78G0345 Cannabis sativa HOM05D002747 ORTHO05D003069 8.9e-06 55.5 62 43.5
Nn1g07916 Nelumbo nucifera HOM05D002747 ORTHO05D003069 8.9e-06 55.5 62 40.3


User provided reference genes

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