Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu063530.1 Olea europaea HOM05D004439 ORTHO05D005670 6.7e-248 860.1 411 100.0
vmacro13901 Vaccinium macrocarpon HOM05D004439 ORTHO05D005670 4.4e-183 644.8 395 75.7
SalBow1G1193 Salvia bowleyana HOM05D004439 ORTHO05D005670 4.9e-182 641.3 392 76.3
CSS0017274 Camellia sinensis var. sinensis HOM05D004439 ORTHO05D005670 1.1e-181 640.2 395 75.4
CSS0021285 Camellia sinensis var. sinensis HOM05D004439 ORTHO05D005670 1.1e-181 640.2 395 75.4
Dinv38840 Davidia involucrata HOM05D004439 ORTHO05D005670 4.2e-181 638.3 394 76.1
MSTRG.1809 Avicennia marina HOM05D004439 ORTHO05D005670 1.2e-180 636.7 392 76.3
Peaxi162Scf00074g01028 Petunia axillaris HOM05D004439 ORTHO05D005670 2.7e-180 635.6 392 76.3
EL10Ac5g12905 Beta vulgaris HOM05D004439 ORTHO05D005670 3.5e-180 635.2 395 75.7
Migut.A00663 Erythranthe guttata HOM05D004439 ORTHO05D005670 3.5e-180 635.2 390 76.2
Sopen08g030490 Solanum pennellii HOM05D004439 ORTHO05D005670 7.8e-180 634.0 393 75.3
Potri.003G104700 Populus trichocarpa HOM05D004439 ORTHO05D005670 1.3e-179 633.3 389 76.3
Lj8C209T4 Lonicera japonica HOM05D004439 ORTHO05D005670 1.7e-179 632.9 392 75.8
vmacro05785 Vaccinium macrocarpon HOM05D004439 ORTHO05D005670 3.0e-179 632.1 403 73.9
COL.COLO4_10686 Corchorus olitorius HOM05D004439 ORTHO05D005670 1.5e-178 629.8 395 75.9
TAR629G1063 Trochodendron aralioides HOM05D004439 ORTHO05D005670 1.9e-178 629.4 395 74.7
Hund11394 Selenicereus undatus HOM05D004439 ORTHO05D005670 7.3e-178 627.5 398 74.6
TWI81G0104 Tripterygium wilfordii HOM05D004439 ORTHO05D005670 7.3e-178 627.5 394 74.9
Rhsim07G0082800 Rhododendron simsii HOM05D004439 ORTHO05D005670 9.6e-178 627.1 395 73.9
Ciclev10020115m.g Citrus clementina HOM05D004439 ORTHO05D005670 1.3e-177 626.7 394 76.4
Duzib205G1996 Durio zibethinus HOM05D004439 ORTHO05D005670 1.3e-177 626.7 395 75.4
CiPaw.11G122200 Carya illinoinensis HOM05D004439 ORTHO05D005670 1.6e-177 626.3 397 74.8
Solyc08g082200.3 Solanum lycopersicum HOM05D004439 ORTHO05D005670 1.6e-177 626.3 393 74.6
Gohir.D12G237200 Gossypium hirsutum HOM05D004439 ORTHO05D005670 8.1e-177 624.0 395 75.4
Gorai.008G253800 Gossypium raimondii HOM05D004439 ORTHO05D005670 1.1e-176 623.6 391 76.0
Prupe.5G117700 Prunus persica HOM05D004439 ORTHO05D005670 1.4e-176 623.2 402 73.4
Cfa023584 Carpinus fangiana HOM05D004439 ORTHO05D005670 9.0e-176 620.5 395 73.9
CANSAT21G0267 Cannabis sativa HOM05D004439 ORTHO05D005670 3.4e-175 618.6 400 74.2
Duzib084G1213 Durio zibethinus HOM05D004439 ORTHO05D005670 3.4e-175 618.6 402 74.4
Nn2g14269 Nelumbo nucifera HOM05D004439 ORTHO05D005670 3.4e-175 618.6 389 74.6
Atru.chr9.2010 Acer truncatum HOM05D004439 ORTHO05D005670 5.8e-175 617.8 392 74.2
Sc01g0010250 Simmondsia chinensis HOM05D004439 ORTHO05D005670 2.2e-174 615.9 394 73.9
Nitab4.5_0001231g0030 Nicotiana tabacum HOM05D004439 ORTHO05D005670 2.9e-174 615.5 392 75.0
Thecc.03G296500 Theobroma cacao HOM05D004439 ORTHO05D005670 4.9e-174 614.8 395 74.4
CAN.G532.113 Capsicum annuum HOM05D004439 ORTHO05D005670 8.4e-174 614.0 393 73.0
GSVIVG01019518001 Vitis vinifera HOM05D004439 ORTHO05D005670 1.9e-173 612.8 386 74.6
Cc08_g15970 Coffea canephora HOM05D004439 ORTHO05D005670 2.4e-173 612.5 393 73.8
CsaV3_5G039570 Cucumis sativus L. HOM05D004439 ORTHO05D005670 1.6e-172 609.8 391 72.4
MBI07_g27257_MAGBIO Magnolia biondii HOM05D004439 ORTHO05D005670 1.6e-172 609.8 394 71.6
Manes.11G128600 Manihot esculenta HOM05D004439 ORTHO05D005670 2.1e-172 609.4 396 73.5
Eucgr.E00854 Eucalyptus grandis HOM05D004439 ORTHO05D005670 2.7e-172 609.0 402 71.1
unitig_92.g28124 Utricularia gibba HOM05D004439 ORTHO05D005670 3.5e-172 608.6 383 74.7
AUR62019828 Chenopodium quinoa HOM05D004439 ORTHO05D005670 7.9e-172 607.4 420 69.3
Lsat_1_v5_gn_6_12240 Lactuca sativa HOM05D004439 ORTHO05D005670 1.0e-171 607.1 391 72.9
RcHm_v2.0_Chr7g0195041 Rosa chinensis HOM05D004439 ORTHO05D005670 3.0e-171 605.5 394 73.4
Sed0005226 Sechium edule HOM05D004439 ORTHO05D005670 4.3e-170 601.7 391 71.1
FAN18G4375 Fragaria x ananassa HOM05D004439 ORTHO05D005670 6.2e-169 597.8 394 72.1
SGA_v2.0_scaffold305G47954 Striga asiatica HOM05D004439 ORTHO05D005670 1.4e-168 596.7 425 68.2
QL02p030851 Quercus lobata HOM05D004439 ORTHO05D005670 3.1e-168 595.5 398 71.4
MD06G1105400 Malus domestica HOM05D004439 ORTHO05D005670 1.2e-167 593.6 390 72.3
FvH4_5g04460 Fragaria vesca HOM05D004439 ORTHO05D005670 4.5e-167 591.7 378 73.8
FAN04G2433 Fragaria x ananassa HOM05D004439 ORTHO05D005670 2.9e-166 589.0 365 74.5
Lalb_Chr16g0376971 Lupinus albus HOM05D004439 ORTHO05D005670 2.9e-166 589.0 385 71.7
FAN18G2355 Fragaria x ananassa HOM05D004439 ORTHO05D005670 4.9e-166 588.2 395 71.1
FAN08G0613 Fragaria x ananassa HOM05D004439 ORTHO05D005670 3.2e-165 585.5 366 74.6
Ca_15083_v3 Cicer arietinum L. HOM05D004439 ORTHO05D005670 4.2e-165 585.1 360 75.8
Lj1g0018659 Lotus japonicus HOM05D004439 ORTHO05D005670 5.5e-165 584.7 364 75.3
Medtr3g062490 Medicago truncatula HOM05D004439 ORTHO05D005670 9.3e-165 583.9 360 75.6
Lj8A194T41 Lonicera japonica HOM05D004439 ORTHO05D005670 2.7e-164 582.4 384 72.7
Actinidia27332 Actinidia chinensis HOM05D004439 ORTHO05D005670 4.6e-164 581.6 394 70.1
Phvul.009G207100 Phaseolus vulgaris HOM05D004439 ORTHO05D005670 1.0e-163 580.5 364 74.7
ATR0320G020 Amborella trichopoda HOM05D004439 ORTHO05D005670 1.3e-163 580.1 388 69.6
FAN13G1146 Fragaria x ananassa HOM05D004439 ORTHO05D005670 2.3e-163 579.3 362 74.6
Glyma.02G286600 Glycine max HOM05D004439 ORTHO05D005670 3.0e-163 578.9 365 74.5
Gohir.A12G236000 Gossypium hirsutum HOM05D004439 ORTHO05D005670 3.0e-163 578.9 368 75.8
ECA233G4302 Erigeron canadensis HOM05D004439 ORTHO05D005670 6.7e-163 577.8 388 71.1
Psat5g147560 Pisum sativum HOM05D004439 ORTHO05D005670 1.1e-162 577.0 381 71.9
arahy.Tifrunner.gnm1.ann1.FA9VAL Arachis hypogaea HOM05D004439 ORTHO05D005670 1.5e-162 576.6 390 69.2
arahy.Tifrunner.gnm1.ann1.X9M6Z3 Arachis hypogaea HOM05D004439 ORTHO05D005670 1.9e-162 576.2 390 69.2
Cpa.g.sc79.44 Carica papaya HOM05D004439 ORTHO05D005670 5.7e-162 574.7 397 71.0
VMungo0647G0731 Vigna mungo HOM05D004439 ORTHO05D005670 5.7e-162 574.7 363 74.1
Aqoxy5G04196 Aquilegia oxysepala HOM05D004439 ORTHO05D005670 7.4e-162 574.3 395 69.6
arahy.Tifrunner.gnm1.ann1.URL0E3 Arachis hypogaea HOM05D004439 ORTHO05D005670 2.8e-161 572.4 390 68.7
AUR62010830 Chenopodium quinoa HOM05D004439 ORTHO05D005670 3.7e-161 572.0 395 69.4
PSO384G1647 Papaver somniferum HOM05D004439 ORTHO05D005670 3.7e-161 572.0 393 67.9
Ah.12g052480 Amaranthus hybridus HOM05D004439 ORTHO05D005670 8.2e-161 570.9 400 68.5
Ca_15072_v3 Cicer arietinum L. HOM05D004439 ORTHO05D005670 1.4e-160 570.1 386 70.5
DCAR_006321 Daucus carota HOM05D004439 ORTHO05D005670 2.4e-160 569.3 395 69.9
PSO339G0633 Papaver somniferum HOM05D004439 ORTHO05D005670 5.3e-160 568.2 392 67.6
HanXRQChr06g0184201 Helianthus annuus HOM05D004439 ORTHO05D005670 2.0e-159 566.2 393 70.7
HanXRQChr05g0138501 Helianthus annuus HOM05D004439 ORTHO05D005670 3.8e-158 562.0 393 70.0
arahy.Tifrunner.gnm1.ann1.B833UN Arachis hypogaea HOM05D004439 ORTHO05D005670 5.5e-157 558.1 405 65.9
Nitab4.5_0008661g0010 Nicotiana tabacum HOM05D004439 ORTHO05D005670 1.6e-153 546.6 390 69.5
AL7G47340 Arabidopsis lyrata HOM05D004439 ORTHO05D005670 1.1e-152 543.9 395 65.1
Carub.0007s3348 Capsella rubella HOM05D004439 ORTHO05D005670 1.8e-152 543.1 395 63.8
CARHR212680 Cardamine hirsuta HOM05D004439 ORTHO05D005670 4.1e-152 542.0 396 63.9
THA.LOC104809335 Tarenaya hassleriana HOM05D004439 ORTHO05D005670 4.1e-152 542.0 409 63.3
CDE02G4298 Ceratophyllum demersum HOM05D004439 ORTHO05D005670 6.9e-152 541.2 395 65.6
AT5G41880 Arabidopsis thaliana HOM05D004439 ORTHO05D005670 4.5e-151 538.5 395 63.8
Aqoxy1G01152 Aquilegia oxysepala HOM05D004439 ORTHO05D005670 7.7e-151 537.7 346 72.8
Sabra03G0071700 Salix brachista HOM05D004439 ORTHO05D005670 7.7e-151 537.7 420 64.0
Thhalv10027750m.g Eutrema salsugineum HOM05D004439 ORTHO05D005670 1.7e-150 536.6 395 64.6
BcaC02g08908 Brassica carinata HOM05D004439 ORTHO05D005670 3.8e-150 535.4 395 63.5
BcaB02g07872 Brassica carinata HOM05D004439 ORTHO05D005670 8.5e-150 534.3 396 63.9
A04p15000 Brassica napus HOM05D004439 ORTHO05D005670 3.2e-149 532.3 397 63.5
C04p49290 Brassica napus HOM05D004439 ORTHO05D005670 3.2e-149 532.3 397 63.5
BolC4t26514H Brassica oleracea HOM05D004439 ORTHO05D005670 3.2e-149 532.3 397 63.5
Sp7g00230 Schrenkiella parvula HOM05D004439 ORTHO05D005670 3.2e-149 532.3 396 63.4
BraA04t17145Z Brassica rapa HOM05D004439 ORTHO05D005670 3.6e-148 528.9 397 63.0
C06p20300 Brassica napus HOM05D004439 ORTHO05D005670 1.5e-146 523.5 396 63.4
Mapoly0061s0010 Marchantia polymorpha HOM05D004439 ORTHO05D005670 5.7e-146 521.5 358 65.9
Rhsim09G0008900 Rhododendron simsii HOM05D004439 ORTHO05D005670 2.2e-145 519.6 385 65.5
Aa31LG9G280 Aethionema arabicum HOM05D004439 ORTHO05D005670 6.3e-145 518.1 405 62.2
BcaB06g27677 Brassica carinata HOM05D004439 ORTHO05D005670 1.4e-144 516.9 424 59.0
HPP92_001766 Vanilla planifolia HOM05D004439 ORTHO05D005670 7.7e-143 511.1 391 62.1
Haze_08623 Corylus avellana HOM05D004439 ORTHO05D005670 2.2e-142 509.6 338 71.3
HPP92_001588 Vanilla planifolia HOM05D004439 ORTHO05D005670 4.7e-140 501.9 385 61.6
Pp3c9_1070 Physcomitrium patens HOM05D004439 ORTHO05D005670 2.6e-138 496.1 365 61.6
ClCG08G001530 Citrullus lanatus HOM05D004439 ORTHO05D005670 3.3e-138 495.7 426 59.2
CBR_g30932 Chara braunii HOM05D004439 ORTHO05D005670 2.2e-134 483.0 370 59.2
A07p20990 Brassica napus HOM05D004439 ORTHO05D005670 1.9e-133 479.9 422 57.1
CBR_g51004 Chara braunii HOM05D004439 ORTHO05D005670 4.2e-133 478.8 366 59.0
BcaC08g44563 Brassica carinata HOM05D004439 ORTHO05D005670 6.1e-132 474.9 338 66.0
arahy.Tifrunner.gnm1.ann1.4X43I0 Arachis hypogaea HOM05D004439 ORTHO05D005670 3.0e-131 472.6 349 65.3
DCAR_029884 Daucus carota HOM05D004439 ORTHO05D005670 1.7e-129 466.8 318 72.0
AagrBONN_evm.TU.Sc2ySwM_117.2781 Anthoceros agrestis HOM05D004439 ORTHO05D005670 1.8e-128 463.4 388 56.4
SMO361G0316 Selaginella moellendorffii HOM05D004439 ORTHO05D005670 2.0e-114 416.8 342 57.9
SMO361G0219 Selaginella moellendorffii HOM05D004439 ORTHO05D005670 1.3e-113 414.1 342 56.1
TPR.G13893 Trifolium pratense HOM05D004439 ORTHO05D005670 4.0e-107 392.5 356 55.6
BcaNung06856 Brassica carinata HOM05D004439 ORTHO05D005670 2.6e-106 389.8 411 51.1
MD14G1127500 Malus domestica HOM05D004439 ORTHO05D005670 2.2e-105 386.7 274 68.6
Lj2A169G40 Lonicera japonica HOM05D004439 ORTHO05D005670 3.7e-105 386.0 330 60.3
Cre07.g312350 Chlamydomonas reinhardtii HOM05D004439 ORTHO05D005670 4.9e-105 385.6 369 49.9
SHI03128 Sapria himalayana HOM05D004439 ORTHO05D005670 1.6e-100 370.5 367 50.1
CSS0041217 Camellia sinensis var. sinensis HOM05D004439 ORTHO05D005670 4.0e-99 365.9 410 51.2
Glyma.14G028200 Glycine max HOM05D004439 ORTHO05D005670 2.0e-98 363.6 228 76.3
Cfa025390 Carpinus fangiana HOM05D004439 ORTHO05D005670 3.1e-91 339.7 357 45.1
Zm00001eb346380 Zea mays HOM05D004439 ORTHO05D005670 3.1e-91 339.7 228 69.3
RcHm_v2.0_Chr6g0245381 Rosa chinensis HOM05D004439 ORTHO05D005670 2.9e-89 333.2 210 72.4
PRCOL_00003494 Prasinoderma coloniale HOM05D004439 ORTHO05D005670 3.1e-83 313.2 382 41.4
arahy.Tifrunner.gnm1.ann1.JNH9P6 Arachis hypogaea HOM05D004439 ORTHO05D005670 6.8e-83 312.0 359 49.3
RcHm_v2.0_Chr5g0068871 Rosa chinensis HOM05D004439 ORTHO05D005670 1.5e-74 284.3 276 55.8
TPR.G191 Trifolium pratense HOM05D004439 ORTHO05D005670 1.2e-66 258.1 175 72.0
RcHm_v2.0_Chr6g0245391 Rosa chinensis HOM05D004439 ORTHO05D005670 2.4e-56 223.8 158 70.9
PSO063G0793 Papaver somniferum HOM05D004439 ORTHO05D005670 1.0e-54 218.4 182 58.8
MELO3C027184.2 Cucumis melo HOM05D004439 ORTHO05D005670 1.1e-53 214.9 119 80.7
SEGI_14966 Sequoiadendron giganteum HOM05D004439 ORTHO05D005670 4.6e-47 193.0 192 51.6
MELO3C031246.2 Cucumis melo HOM05D004439 ORTHO05D005670 6.9e-43 179.1 154 59.1
TPR.G9939 Trifolium pratense HOM05D004439 ORTHO05D005670 2.6e-34 150.6 194 44.3
PGSC0003DMG400012290 Solanum tuberosum HOM05D004439 ORTHO05D005670 5.9e-34 149.4 229 38.4
TPR.G9934 Trifolium pratense HOM05D004439 ORTHO05D005670 2.2e-33 147.5 150 56.7
Os05g0358200 Oryza sativa ssp. japonica HOM05D004439 ORTHO05D005670 1.6e-31 141.4 107 63.6
TPR.G3794 Trifolium pratense HOM05D004439 ORTHO05D005670 1.4e-30 138.3 94 73.4
AL1G55640 Arabidopsis lyrata HOM05D004439 ORTHO05D005670 2.6e-26 124.0 197 42.6
AL3G52130 Arabidopsis lyrata HOM05D004439 ORTHO05D005670 3.4e-26 123.6 197 42.6
MD06G1072700 Malus domestica HOM05D004439 ORTHO05D005670 4.4e-21 106.7 59 79.7
MD14G1127600 Malus domestica HOM05D004439 ORTHO05D005670 3.2e-16 90.5 41 90.2
TPR.G22107 Trifolium pratense HOM05D004439 ORTHO05D005670 4.7e-15 86.7 70 65.7
AL2G23180 Arabidopsis lyrata HOM05D004439 ORTHO05D005670 1.5e-13 81.6 197 34.0
SEGI_35904 Sequoiadendron giganteum HOM05D004439 ORTHO05D000007 4.4e-13 80.1 135 34.8
AL1G44430 Arabidopsis lyrata HOM05D004439 ORTHO05D005670 1.4e-11 75.1 43 76.7
Actinidia27324 Actinidia chinensis HOM05D004439 ORTHO05D005670 1.0e-09 68.9 36 86.1
Actinidia27323 Actinidia chinensis HOM05D004439 ORTHO05D005670 1.7e-09 68.2 79 46.8


User provided reference genes

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