Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu063485.1 Olea europaea HOM05D001765 ORTHO05D005876 5.5e-86 321.6 262 100.0
Oeu001465.1 Olea europaea HOM05D001765 ORTHO05D005876 8.2e-74 281.2 158 94.3
unitig_749.g13366 Utricularia gibba HOM05D001765 ORTHO05D005876 8.3e-66 254.6 159 87.4
Nitab4.5_0000276g0120 Nicotiana tabacum HOM05D001765 ORTHO05D005876 1.1e-65 254.2 191 82.7
Peaxi162Scf00065g00002 Petunia axillaris HOM05D001765 ORTHO05D005876 1.1e-65 254.2 190 84.2
CAN.G874.72 Capsicum annuum HOM05D001765 ORTHO05D005876 2.4e-65 253.1 190 84.2
Nitab4.5_0000456g0120 Nicotiana tabacum HOM05D001765 ORTHO05D005876 4.1e-65 252.3 191 81.7
Cc03_g00980 Coffea canephora HOM05D001765 ORTHO05D005876 7.0e-65 251.5 190 84.7
Solyc01g060030.3 Solanum lycopersicum HOM05D001765 ORTHO05D005876 1.2e-64 250.8 190 84.7
Sopen01g026230 Solanum pennellii HOM05D001765 ORTHO05D005876 1.2e-64 250.8 190 84.2
Nitab4.5_0004323g0040 Nicotiana tabacum HOM05D001765 ORTHO05D005876 4.5e-64 248.8 181 85.6
MSTRG.21776 Avicennia marina HOM05D001765 ORTHO05D005876 7.7e-64 248.1 156 87.2
CSS0002630 Camellia sinensis var. sinensis HOM05D001765 ORTHO05D005876 1.3e-63 247.3 182 80.8
CSS0034555 Camellia sinensis var. sinensis HOM05D001765 ORTHO05D005876 1.9e-62 243.4 190 74.7
Cpa.g.sc9.87 Carica papaya HOM05D001765 ORTHO05D005876 1.9e-62 243.4 190 71.6
CDE12G0657 Ceratophyllum demersum HOM05D001765 ORTHO05D005876 1.9e-62 243.4 158 83.5
Dinv44303 Davidia involucrata HOM05D001765 ORTHO05D005876 1.9e-62 243.4 153 85.6
Lj6P689T37 Lonicera japonica HOM05D001765 ORTHO05D005876 1.9e-62 243.4 192 82.3
Actinidia40362 Actinidia chinensis HOM05D001765 ORTHO05D005876 3.2e-62 242.7 188 75.0
vmacro08062 Vaccinium macrocarpon HOM05D001765 ORTHO05D005876 9.4e-62 241.1 196 74.0
Nitab4.5_0010629g0030 Nicotiana tabacum HOM05D001765 ORTHO05D005876 1.6e-61 240.4 190 81.1
SGA_v2.0_scaffold119G32663 Striga asiatica HOM05D001765 ORTHO05D005876 2.1e-61 240.0 160 85.0
MD16G1157200 Malus domestica HOM05D001765 ORTHO05D005876 3.6e-61 239.2 185 73.0
Hma1.2p1_0013F.1_g008730 Hydrangea macrophylla HOM05D001765 ORTHO05D005876 4.7e-61 238.8 198 77.8
Rhsim04G0234200 Rhododendron simsii HOM05D001765 ORTHO05D005876 6.1e-61 238.4 194 73.7
Migut.N00048 Erythranthe guttata HOM05D001765 ORTHO05D005876 2.3e-60 236.5 149 85.2
DCAR_002506 Daucus carota HOM05D001765 ORTHO05D005876 4.0e-60 235.7 157 82.2
Duzib052G0074 Durio zibethinus HOM05D001765 ORTHO05D005876 5.2e-60 235.3 190 78.9
TWI09G0718 Tripterygium wilfordii HOM05D001765 ORTHO05D005876 6.8e-60 235.0 191 74.9
Hma1.2p1_0078F.1_g040010 Hydrangea macrophylla HOM05D001765 ORTHO05D005876 8.8e-60 234.6 143 86.0
Haze_17391 Corylus avellana HOM05D001765 ORTHO05D005876 1.2e-59 234.2 192 78.1
CiPaw.02G075900 Carya illinoinensis HOM05D001765 ORTHO05D005876 1.5e-59 233.8 191 77.0
Prupe.1G122100 Prunus persica HOM05D001765 ORTHO05D005876 1.5e-59 233.8 187 73.8
Ciclev10005673m.g Citrus clementina HOM05D001765 ORTHO05D005876 2.0e-59 233.4 154 83.1
Thecc.04G297600 Theobroma cacao HOM05D001765 ORTHO05D005876 2.0e-59 233.4 190 78.9
MD13G1156300 Malus domestica HOM05D001765 ORTHO05D005876 9.8e-59 231.1 191 73.3
CiPaw.01G139800 Carya illinoinensis HOM05D001765 ORTHO05D005876 1.7e-58 230.3 191 70.7
Haze_01276 Corylus avellana HOM05D001765 ORTHO05D005876 1.7e-58 230.3 186 79.0
MBI19_g07244_MAGBIO Magnolia biondii HOM05D001765 ORTHO05D005876 1.7e-58 230.3 198 70.2
Nn3g21679 Nelumbo nucifera HOM05D001765 ORTHO05D005876 2.2e-58 229.9 160 80.0
Aqoxy1G02157 Aquilegia oxysepala HOM05D001765 ORTHO05D005876 1.4e-57 227.3 155 80.6
Gohir.D09G064400 Gossypium hirsutum HOM05D001765 ORTHO05D005876 1.8e-57 226.9 188 76.1
Gorai.006G079200 Gossypium raimondii HOM05D001765 ORTHO05D005876 1.8e-57 226.9 192 75.5
Atru.chr4.3029 Acer truncatum HOM05D001765 ORTHO05D005876 3.1e-57 226.1 190 72.1
Lsat_1_v5_gn_6_116901 Lactuca sativa HOM05D001765 ORTHO05D005876 4.1e-57 225.7 158 77.8
Sc13g0006420 Simmondsia chinensis HOM05D001765 ORTHO05D005876 5.4e-57 225.3 186 71.5
Gohir.A10G171300 Gossypium hirsutum HOM05D001765 ORTHO05D005876 7.0e-57 224.9 190 74.2
Potri.010G142400 Populus trichocarpa HOM05D001765 ORTHO05D005876 7.0e-57 224.9 190 73.2
Eucgr.A00351 Eucalyptus grandis HOM05D001765 ORTHO05D005876 9.1e-57 224.6 154 75.3
Gohir.A09G065500 Gossypium hirsutum HOM05D001765 ORTHO05D005876 9.1e-57 224.6 152 79.6
HanXRQChr05g0145931 Helianthus annuus HOM05D001765 ORTHO05D005876 9.1e-57 224.6 156 77.6
COL.COLO4_11257 Corchorus olitorius HOM05D001765 ORTHO05D005876 1.2e-56 224.2 193 70.5
COL.COLO4_34649 Corchorus olitorius HOM05D001765 ORTHO05D005123 2.7e-56 223.0 196 68.9
QL06p011625 Quercus lobata HOM05D001765 ORTHO05D005876 2.7e-56 223.0 147 81.6
TWI73G0761 Tripterygium wilfordii HOM05D001765 ORTHO05D005876 2.7e-56 223.0 157 78.3
ECA246G2338 Erigeron canadensis HOM05D001765 ORTHO05D005876 5.9e-56 221.9 163 74.2
Duzib151G0385 Durio zibethinus HOM05D001765 ORTHO05D005876 7.7e-56 221.5 150 82.0
Sabra08G0081000 Salix brachista HOM05D001765 ORTHO05D005876 7.7e-56 221.5 144 81.9
TAR365G0409 Trochodendron aralioides HOM05D001765 ORTHO05D005876 7.7e-56 221.5 193 72.0
Aqoxy5G01535 Aquilegia oxysepala HOM05D001765 ORTHO05D005876 1.0e-55 221.1 152 79.6
Nn4g25612 Nelumbo nucifera HOM05D001765 ORTHO05D005876 1.0e-55 221.1 148 81.1
Potri.008G107100 Populus trichocarpa HOM05D001765 ORTHO05D005876 1.3e-55 220.7 190 74.7
Ca_21450_v3 Cicer arietinum L. HOM05D001765 ORTHO05D005876 1.7e-55 220.3 194 66.5
FvH4_4g19461 Fragaria vesca HOM05D001765 ORTHO05D005876 1.7e-55 220.3 194 72.2
TAR633G2429 Trochodendron aralioides HOM05D001765 ORTHO05D005876 1.7e-55 220.3 195 69.7
FAN07G0091 Fragaria x ananassa HOM05D001765 ORTHO05D005876 2.3e-55 219.9 194 73.7
Glyma.07G241300 Glycine max HOM05D001765 ORTHO05D005876 2.3e-55 219.9 159 76.1
Gorai.011G199400 Gossypium raimondii HOM05D001765 ORTHO05D005876 2.3e-55 219.9 190 75.8
Manes.03G202700 Manihot esculenta HOM05D001765 ORTHO05D005876 2.3e-55 219.9 152 78.3
Prupe.1G073200 Prunus persica HOM05D001765 ORTHO05D005876 2.3e-55 219.9 194 69.6
ClCG06G004640 Citrullus lanatus HOM05D001765 ORTHO05D005876 2.9e-55 219.5 145 82.8
VMungo0647G0513 Vigna mungo HOM05D000091 ORTHO05D005533 2.9e-55 219.5 142 81.7
Sabra10G0110100 Salix brachista HOM05D001765 ORTHO05D005876 3.8e-55 219.2 190 74.2
CANSAT78G1829 Cannabis sativa HOM05D001765 ORTHO05D005876 5.0e-55 218.8 150 80.0
SEGI_21194 Sequoiadendron giganteum HOM05D001765 ORTHO05D005876 5.0e-55 218.8 144 81.9
SEGI_31674 Sequoiadendron giganteum HOM05D001765 ORTHO05D005876 5.0e-55 218.8 144 81.9
ATR0706G059 Amborella trichopoda HOM05D001765 ORTHO05D005876 6.6e-55 218.4 144 81.2
CDE01G0626 Ceratophyllum demersum HOM05D001765 ORTHO05D005876 6.6e-55 218.4 158 76.6
PSO210G5285 Papaver somniferum HOM05D001765 ORTHO05D005876 8.6e-55 218.0 184 67.4
Aa31LG11G7990 Aethionema arabicum HOM05D001765 ORTHO05D005876 1.1e-54 217.6 184 79.3
EL10Ac4g08905 Beta vulgaris HOM05D001765 ORTHO05D005876 1.9e-54 216.9 167 74.3
AUR62037504 Chenopodium quinoa HOM05D001765 ORTHO05D005876 3.3e-54 216.1 156 78.2
Glyma.17G032500 Glycine max HOM05D001765 ORTHO05D005876 4.2e-54 215.7 152 77.6
Gohir.D10G178400 Gossypium hirsutum HOM05D001765 ORTHO05D005876 5.5e-54 215.3 190 75.3
Lalb_Chr13g0298421 Lupinus albus HOM05D001765 ORTHO05D005876 5.5e-54 215.3 153 77.1
THA.LOC104802705 Tarenaya hassleriana HOM05D001765 ORTHO05D005876 7.2e-54 214.9 190 74.7
PGR031G3587 Punica granatum HOM05D001765 ORTHO05D005876 9.5e-54 214.5 149 76.5
VMungo1215G2482 Vigna mungo HOM05D001765 ORTHO05D005876 1.2e-53 214.2 155 74.8
PSO761G0153 Papaver somniferum HOM05D001765 ORTHO05D005876 2.1e-53 213.4 181 69.6
Lalb_Chr07g0182091 Lupinus albus HOM05D001765 ORTHO05D005876 2.8e-53 213.0 143 79.0
Sed0022335 Sechium edule HOM05D001765 ORTHO05D005876 2.8e-53 213.0 145 80.0
Ah.04g162900 Amaranthus hybridus HOM05D001765 ORTHO05D005876 4.7e-53 212.2 154 77.3
BolC7t44518H Brassica oleracea HOM05D001765 ORTHO05D005876 4.7e-53 212.2 146 80.8
BraA06t26751Z Brassica rapa HOM05D001765 ORTHO05D005876 4.7e-53 212.2 146 80.8
Carub.0008s0928 Capsella rubella HOM05D001765 ORTHO05D005876 4.7e-53 212.2 143 81.8
A06p38370 Brassica napus HOM05D001765 ORTHO05D005876 6.1e-53 211.8 146 80.8
AT5G49400 Arabidopsis thaliana HOM05D001765 ORTHO05D005876 8.0e-53 211.5 146 80.8
Phvul.008G245800 Phaseolus vulgaris HOM05D001765 ORTHO05D005876 8.0e-53 211.5 144 79.2
Phvul.009G074533 Phaseolus vulgaris HOM05D001765 ORTHO05D005876 8.0e-53 211.5 144 79.2
Thhalv10004753m.g Eutrema salsugineum HOM05D001765 ORTHO05D005876 1.0e-52 211.1 168 73.2
Sp2g19740 Schrenkiella parvula HOM05D001765 ORTHO05D005876 1.0e-52 211.1 169 74.0
SpUn0021_0110 Schrenkiella parvula HOM05D001765 ORTHO05D005876 1.0e-52 211.1 169 74.0
BcaC06g30699 Brassica carinata HOM05D001765 ORTHO05D005876 1.4e-52 210.7 141 81.6
Phvul.003G112500 Phaseolus vulgaris HOM05D001765 ORTHO05D005876 1.4e-52 210.7 153 76.5
THA.LOC104818892 Tarenaya hassleriana HOM05D001765 ORTHO05D005876 1.4e-52 210.7 153 79.1
TPR.G16856 Trifolium pratense HOM05D001765 ORTHO05D005876 1.4e-52 210.7 143 78.3
BcaNung02601 Brassica carinata HOM05D001765 ORTHO05D005876 2.3e-52 209.9 146 80.1
C07p39890 Brassica napus HOM05D001765 ORTHO05D005876 2.3e-52 209.9 146 80.1
Aqoxy5G02976 Aquilegia oxysepala HOM05D001765 ORTHO05D005876 4.0e-52 209.1 148 77.7
arahy.Tifrunner.gnm1.ann1.03CYAA Arachis hypogaea HOM05D001765 ORTHO05D005876 8.9e-52 208.0 133 83.5
CsaV3_2G015100 Cucumis sativus L. HOM05D001765 ORTHO05D005876 8.9e-52 208.0 135 85.2
CARHR182130 Cardamine hirsuta HOM05D001765 ORTHO05D005876 1.2e-51 207.6 141 80.9
MELO3C023334.2 Cucumis melo HOM05D001765 ORTHO05D005876 1.2e-51 207.6 134 85.8
AL8G23110 Arabidopsis lyrata HOM05D001765 ORTHO05D005876 1.5e-51 207.2 146 80.1
Ciclev10016311m.g Citrus clementina HOM05D001765 ORTHO05D005876 2.0e-51 206.8 131 85.5
BcaC03g17719 Brassica carinata HOM05D001765 ORTHO05D005876 2.6e-51 206.5 152 77.6
A02p38130 Brassica napus HOM05D001765 ORTHO05D003527 2.6e-51 206.5 145 80.7
C02p57300 Brassica napus HOM05D001765 ORTHO05D003527 2.6e-51 206.5 152 77.6
BolC2t11799H Brassica oleracea HOM05D001765 ORTHO05D003527 2.6e-51 206.5 152 77.6
AUR62004747 Chenopodium quinoa HOM05D001765 ORTHO05D005876 4.4e-51 205.7 139 83.5
RcHm_v2.0_Chr4g0424571 Rosa chinensis HOM05D001765 ORTHO05D005876 6.3e-50 201.8 133 84.2
Zm00001eb109890 Zea mays HOM05D001765 ORTHO05D005876 3.2e-49 199.5 150 73.3
Zm00001eb328920 Zea mays HOM05D001765 ORTHO05D005876 5.4e-49 198.7 150 73.3
Mapoly0023s0038 Marchantia polymorpha HOM05D001765 ORTHO05D005876 3.5e-48 196.1 162 72.2
BraA02t08788Z Brassica rapa HOM05D001765 ORTHO05D005876 1.0e-47 194.5 191 71.2
Sed0021764 Sechium edule HOM05D001765 ORTHO05D005876 1.3e-47 194.1 131 81.7
Os11g0199600 Oryza sativa ssp. japonica HOM05D001765 ORTHO05D005876 2.9e-47 193.0 146 76.0
Psat4g024600 Pisum sativum HOM05D001765 ORTHO05D005876 3.9e-47 192.6 185 62.7
Pp3c14_13970 Physcomitrium patens HOM05D001765 ORTHO05D005876 1.5e-46 190.7 134 78.4
Lj4g0023600 Lotus japonicus HOM05D001765 ORTHO05D005876 2.5e-46 189.9 136 77.9
AagrBONN_evm.TU.Sc2ySwM_362.810 Anthoceros agrestis HOM05D001765 ORTHO05D005876 2.1e-45 186.8 143 73.4
Nitab4.5_0004323g0070 Nicotiana tabacum HOM05D001765 ORTHO05D005876 1.0e-44 184.5 114 86.8
Mapoly0171s0012 Marchantia polymorpha HOM05D001765 ORTHO05D005876 8.9e-44 181.4 139 69.8
Manes.15G005450 Manihot esculenta HOM05D001765 ORTHO05D005876 1.2e-43 181.0 133 71.4
BcaB07g34154 Brassica carinata HOM05D001765 ORTHO05D005876 1.5e-43 180.6 149 71.8
Pp3c14_17690 Physcomitrium patens HOM05D001765 ORTHO05D005876 1.1e-41 174.5 132 71.2
AagrBONN_evm.TU.Sc2ySwM_228.5656 Anthoceros agrestis HOM05D001765 ORTHO05D005876 4.0e-36 156.0 119 74.8
MBI19_g17409_MAGBIO Magnolia biondii HOM05D001765 ORTHO05D005876 1.4e-33 147.5 198 55.1
CBR_g53494 Chara braunii HOM05D000188 ORTHO05D005876 3.5e-32 142.9 135 61.5
SMO340G0272 Selaginella moellendorffii HOM05D001765 ORTHO05D005876 3.0e-31 139.8 131 61.8
Zm00001eb091100 Zea mays HOM05D001765 ORTHO05D005876 5.1e-31 139.0 130 61.5
Zm00001eb276930 Zea mays HOM05D001765 ORTHO05D005876 1.5e-30 137.5 111 70.3
CAN.G201.7 Capsicum annuum HOM05D001765 ORTHO05D005876 2.1e-29 133.7 181 61.3
SEGI_08255 Sequoiadendron giganteum HOM05D001765 ORTHO05D005876 3.7e-26 122.9 99 67.7
Lsat_1_v5_gn_6_18261 Lactuca sativa HOM05D001765 ORTHO05D005876 1.4e-25 120.9 146 54.1
GSVIVG01035017001 Vitis vinifera HOM05D001765 ORTHO05D005876 4.1e-25 119.4 86 82.6
HanXRQChr13g0395311 Helianthus annuus HOM05D001765 ORTHO05D005876 2.7e-24 116.7 143 52.4
ECA233G0063 Erigeron canadensis HOM05D001765 ORTHO05D005876 6.6e-23 112.1 141 53.2
ATR1159G054 Amborella trichopoda HOM05D001765 ORTHO05D005876 1.5e-22 110.9 78 66.7
Zm00001eb408400 Zea mays HOM05D001765 ORTHO05D005876 1.4e-20 104.4 83 72.3
Medtr1g032030 Medicago truncatula HOM05D001765 ORTHO05D005876 1.3e-18 97.8 69 84.1
Medtr1g032370 Medicago truncatula HOM05D001765 ORTHO05D005876 1.3e-18 97.8 69 84.1
CAN.G197.3 Capsicum annuum HOM05D001765 ORTHO05D005876 1.7e-18 97.4 73 78.1
ATR1159G071 Amborella trichopoda HOM05D001765 ORTHO05D005876 6.2e-13 79.0 67 77.6
ATR1159G066 Amborella trichopoda HOM05D001765 ORTHO05D005876 6.9e-12 75.5 65 73.8
Dinv15195 Davidia involucrata HOM05D002174 ORTHO05D005447 8.4e-10 68.6 54 70.4
Cre12.g529200 Chlamydomonas reinhardtii HOM05D001765 ORTHO05D005876 3.0e-07 60.1 59 45.8


User provided reference genes

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