Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu063297.1 Olea europaea HOM05D000802 ORTHO05D001074 3.9e-287 991.1 639 100.0
Oeu006672.1 Olea europaea HOM05D000802 ORTHO05D001074 8.0e-139 498.4 665 60.6
MSTRG.5441 Avicennia marina HOM05D000802 ORTHO05D001074 1.3e-56 225.3 665 32.5
SalBow3G3128 Salvia bowleyana HOM05D000802 ORTHO05D001074 3.3e-52 210.7 712 34.1
Migut.N01301 Erythranthe guttata HOM05D000802 ORTHO05D001074 5.3e-42 176.8 572 33.4
SGA_v2.0_scaffold207G41897 Striga asiatica HOM05D000802 ORTHO05D001074 7.0e-42 176.4 717 32.5
Dinv41967 Davidia involucrata HOM05D000802 ORTHO05D001074 2.8e-27 127.9 281 37.7
Dinv04953 Davidia involucrata HOM05D000802 ORTHO05D001074 1.1e-26 125.9 706 27.6
FAN15G0734 Fragaria x ananassa HOM05D000802 ORTHO05D001074 2.3e-21 108.2 446 29.8
CiPaw.06G124200 Carya illinoinensis HOM05D000802 ORTHO05D001074 6.8e-21 106.7 64 84.4
Ciclev10030161m.g Citrus clementina HOM05D000802 ORTHO05D001074 3.4e-20 104.4 63 82.5
QL11p049138 Quercus lobata HOM05D000802 ORTHO05D001074 3.4e-20 104.4 670 25.2
Atru.chr5.3268 Acer truncatum HOM05D000802 ORTHO05D001074 4.4e-20 104.0 147 46.9
QL11p048558 Quercus lobata HOM05D000802 ORTHO05D001074 4.4e-20 104.0 669 25.1
Glyma.11G105500 Glycine max HOM05D000802 ORTHO05D001074 7.5e-20 103.2 64 81.2
Prupe.8G162300 Prunus persica HOM05D000802 ORTHO05D001074 7.5e-20 103.2 63 82.5
Actinidia23683 Actinidia chinensis HOM05D000802 ORTHO05D001074 1.3e-19 102.4 446 29.6
RcHm_v2.0_Chr6g0244541 Rosa chinensis HOM05D000802 ORTHO05D001074 1.3e-19 102.4 63 81.0
Solyc01g111240.4 Solanum lycopersicum HOM05D000802 ORTHO05D001074 1.3e-19 102.4 63 82.5
GSVIVG01024062001 Vitis vinifera HOM05D000802 ORTHO05D001074 1.3e-19 102.4 244 36.9
Glyma.12G030400 Glycine max HOM05D000802 ORTHO05D001074 3.7e-19 100.9 64 79.7
MBI09_g39820_MAGBIO Magnolia biondii HOM05D000802 ORTHO05D001074 3.7e-19 100.9 63 79.4
Sopen01g053310 Solanum pennellii HOM05D000802 ORTHO05D001074 3.7e-19 100.9 63 81.0
PGSC0003DMG400001593 Solanum tuberosum HOM05D000802 ORTHO05D001074 3.7e-19 100.9 63 81.0
VMungo1127G0888 Vigna mungo HOM05D000802 ORTHO05D001074 3.7e-19 100.9 64 79.7
Phvul.011G033400 Phaseolus vulgaris HOM05D000802 ORTHO05D001074 4.9e-19 100.5 64 78.1
CSS0023524 Camellia sinensis var. sinensis HOM05D000802 ORTHO05D001074 6.3e-19 100.1 193 40.4
Duzib248G0272 Durio zibethinus HOM05D000802 ORTHO05D001074 6.3e-19 100.1 137 46.7
Aqoxy6G02209 Aquilegia oxysepala HOM05D000802 ORTHO05D001074 1.1e-18 99.4 64 79.7
FAN27G2117 Fragaria x ananassa HOM05D000802 ORTHO05D001074 1.1e-18 99.4 445 29.7
Lalb_Chr19g0139221 Lupinus albus HOM05D000802 ORTHO05D001074 1.1e-18 99.4 64 79.7
Nn8g41054 Nelumbo nucifera HOM05D000802 ORTHO05D001074 1.1e-18 99.4 63 81.0
Sopen11g019360 Solanum pennellii HOM05D000802 ORTHO05D001074 1.1e-18 99.4 63 79.4
PGSC0003DMG400009579 Solanum tuberosum HOM05D000802 ORTHO05D001074 1.1e-18 99.4 235 37.9
unitig_52.g17375 Utricularia gibba HOM05D000802 ORTHO05D001074 1.1e-18 99.4 221 35.3
COL.COLO4_17293 Corchorus olitorius HOM05D000802 ORTHO05D001074 1.8e-18 98.6 63 79.4
Peaxi162Scf00362g00094 Petunia axillaris HOM05D000802 ORTHO05D001074 2.4e-18 98.2 161 42.9
Sabra09G0100700 Salix brachista HOM05D000802 ORTHO05D001074 2.4e-18 98.2 64 78.1
Sabra09G0101500 Salix brachista HOM05D000802 ORTHO05D001074 2.4e-18 98.2 64 78.1
THA.LOC104807274 Tarenaya hassleriana HOM05D000802 ORTHO05D001074 2.4e-18 98.2 63 79.4
Duzib132G0263 Durio zibethinus HOM05D000802 ORTHO05D001074 3.1e-18 97.8 227 35.7
CAN.G588.39 Capsicum annuum HOM05D000802 ORTHO05D001074 4.1e-18 97.4 63 77.8
Thecc.02G064400 Theobroma cacao HOM05D000802 ORTHO05D001074 4.1e-18 97.4 446 27.6
Duzib052G0465 Durio zibethinus HOM05D000802 ORTHO05D001074 5.4e-18 97.1 63 77.8
Solyc11g043010.1 Solanum lycopersicum HOM05D000802 ORTHO05D001074 7.0e-18 96.7 63 77.8
TWI31G1249 Tripterygium wilfordii HOM05D000802 ORTHO05D001074 7.0e-18 96.7 63 79.4
FAN24G2763 Fragaria x ananassa HOM05D000802 ORTHO05D001074 9.2e-18 96.3 449 29.6
Lj3g0027098 Lotus japonicus HOM05D000802 ORTHO05D001074 9.2e-18 96.3 63 77.8
Haze_02184 Corylus avellana HOM05D000802 ORTHO05D001074 1.2e-17 95.9 437 29.7
CiPaw.05G078900 Carya illinoinensis HOM05D000802 ORTHO05D001074 1.6e-17 95.5 254 34.3
AUR62010075 Chenopodium quinoa HOM05D000802 ORTHO05D001074 1.6e-17 95.5 383 30.5
Hma1.2p1_0032F.1_g019575 Hydrangea macrophylla HOM05D000802 ORTHO05D001074 1.6e-17 95.5 344 30.8
A05p32920 Brassica napus HOM05D000802 ORTHO05D001074 2.0e-17 95.1 63 74.6
Lalb_Chr01g0001691 Lupinus albus HOM05D000802 ORTHO05D001074 2.0e-17 95.1 64 76.6
Sc18g0006610 Simmondsia chinensis HOM05D000802 ORTHO05D001074 2.0e-17 95.1 156 43.6
BraA05t22117Z Brassica rapa HOM05D000802 ORTHO05D001074 4.5e-17 94.0 63 73.0
Ca_01860_v3 Cicer arietinum L. HOM05D000802 ORTHO05D001074 4.5e-17 94.0 63 74.6
Manes.11G082600 Manihot esculenta HOM05D000802 ORTHO05D001074 4.5e-17 94.0 60 80.0
A05p32930 Brassica napus HOM05D000802 ORTHO05D001074 5.9e-17 93.6 63 73.0
MELO3C013370.2 Cucumis melo HOM05D000802 ORTHO05D001074 5.9e-17 93.6 229 34.9
C05p49640 Brassica napus HOM05D001267 ORTHO05D001323 7.8e-17 93.2 63 73.0
BolC5t33722H Brassica oleracea HOM05D000802 ORTHO05D001074 1.0e-16 92.8 63 71.4
FvH4_2g01650 Fragaria vesca HOM05D000802 ORTHO05D001074 1.3e-16 92.4 562 26.7
Potri.009G131200 Populus trichocarpa HOM05D000802 ORTHO05D001074 1.3e-16 92.4 350 32.6
Ca_15308_v3 Cicer arietinum L. HOM05D000802 ORTHO05D001074 1.7e-16 92.0 63 76.2
Gohir.D12G033700 Gossypium hirsutum HOM05D000802 ORTHO05D001074 2.3e-16 91.7 213 34.3
BraA05t22118Z Brassica rapa HOM05D000802 ORTHO05D001074 2.9e-16 91.3 63 71.4
CARHR091860 Cardamine hirsuta HOM05D000802 ORTHO05D001074 2.9e-16 91.3 151 41.1
Cfa005211 Carpinus fangiana HOM05D000802 ORTHO05D001074 2.9e-16 91.3 349 31.5
Gorai.008G035000 Gossypium raimondii HOM05D000802 ORTHO05D001074 2.9e-16 91.3 347 30.3
Hund00036 Selenicereus undatus HOM05D000802 ORTHO05D001074 2.9e-16 91.3 63 71.4
DCAR_022775 Daucus carota HOM05D000802 ORTHO05D001074 3.8e-16 90.9 64 71.9
Gohir.D12G034000 Gossypium hirsutum HOM05D000802 ORTHO05D001074 3.8e-16 90.9 347 30.3
Rhsim05G0062300 Rhododendron simsii HOM05D000802 ORTHO05D001074 3.8e-16 90.9 369 30.1
FAN20G1707 Fragaria x ananassa HOM05D000802 ORTHO05D001074 5.0e-16 90.5 551 26.3
Actinidia23685 Actinidia chinensis HOM05D000802 ORTHO05D001074 6.6e-16 90.1 217 33.6
CsaV3_7G000870 Cucumis sativus L. HOM05D000802 ORTHO05D001074 6.6e-16 90.1 258 33.7
Psat1g166440 Pisum sativum HOM05D000802 ORTHO05D001074 6.6e-16 90.1 240 34.2
Psat5g002960 Pisum sativum HOM05D000802 ORTHO05D001074 6.6e-16 90.1 64 73.4
PSO541G3536 Papaver somniferum HOM05D000802 ORTHO05D001074 8.6e-16 89.7 64 73.4
BcaB06g25762 Brassica carinata HOM05D000802 ORTHO05D001074 1.9e-15 88.6 56 76.8
Carub.0003s3039 Capsella rubella HOM05D000802 ORTHO05D001074 1.9e-15 88.6 133 44.4
Ah.01g022730 Amaranthus hybridus HOM05D000802 ORTHO05D001074 2.5e-15 88.2 64 71.9
Lj5C183G4 Lonicera japonica HOM05D000802 ORTHO05D001074 2.5e-15 88.2 680 25.4
Sp3g30110 Schrenkiella parvula HOM05D000802 ORTHO05D001074 3.3e-15 87.8 63 71.4
Carub.0003s1635 Capsella rubella HOM05D000802 ORTHO05D001074 4.3e-15 87.4 231 34.6
Cc02_g16410 Coffea canephora HOM05D000802 ORTHO05D001074 5.6e-15 87.0 332 29.8
Aa31LG2G15650 Aethionema arabicum HOM05D000802 ORTHO05D001074 9.5e-15 86.3 370 29.5
MD10G1120800 Malus domestica HOM05D000802 ORTHO05D001074 9.5e-15 86.3 684 25.3
Potri.004G171600 Populus trichocarpa HOM05D000802 ORTHO05D001074 9.5e-15 86.3 230 32.2
TAR376G0990 Trochodendron aralioides HOM05D000802 ORTHO05D001074 9.5e-15 86.3 325 32.0
HPP92_002399 Vanilla planifolia HOM05D000802 ORTHO05D001074 9.5e-15 86.3 64 70.3
AT3G16620 Arabidopsis thaliana HOM05D000802 ORTHO05D001074 1.2e-14 85.9 220 33.2
Rhsim11G0190300 Rhododendron simsii HOM05D000802 ORTHO05D001074 1.2e-14 85.9 405 28.4
Gorai.008G034600 Gossypium raimondii HOM05D000802 ORTHO05D001074 1.6e-14 85.5 217 33.6
SHI05719 Sapria himalayana HOM05D000802 ORTHO05D001074 1.6e-14 85.5 60 75.0
ATR0810G228 Amborella trichopoda HOM05D000802 ORTHO05D001074 2.1e-14 85.1 63 71.4
PGR042G3620 Punica granatum HOM05D000802 ORTHO05D001074 2.1e-14 85.1 234 35.0
BolC5t33721H Brassica oleracea HOM05D000802 ORTHO05D001074 4.7e-14 84.0 55 72.7
Sabra04G0114000 Salix brachista HOM05D000802 ORTHO05D001074 4.7e-14 84.0 329 29.8
CDE05G3593 Ceratophyllum demersum HOM05D000802 ORTHO05D001074 6.1e-14 83.6 64 70.3
AUR62013067 Chenopodium quinoa HOM05D000802 ORTHO05D001074 6.1e-14 83.6 408 27.9
AL3G49320 Arabidopsis lyrata HOM05D000802 ORTHO05D001074 8.0e-14 83.2 258 34.1
AT2G16640 Arabidopsis thaliana HOM05D000802 ORTHO05D001074 8.0e-14 83.2 195 34.4
CDE05G2499 Ceratophyllum demersum HOM05D000802 ORTHO05D001074 8.0e-14 83.2 64 70.3
Sed0011951 Sechium edule HOM05D000802 ORTHO05D001074 8.0e-14 83.2 56 75.0
vmacro17370 Vaccinium macrocarpon HOM05D000802 ORTHO05D001074 8.0e-14 83.2 348 29.6
ECA246G2683 Erigeron canadensis HOM05D000802 ORTHO05D001074 1.0e-13 82.8 61 67.2
EL10Ac9g21416 Beta vulgaris HOM05D000802 ORTHO05D001074 1.4e-13 82.4 396 28.8
ClCG02G004240 Citrullus lanatus HOM05D000802 ORTHO05D001074 1.8e-13 82.0 428 27.1
Gohir.A12G038300 Gossypium hirsutum HOM05D000802 ORTHO05D001074 1.8e-13 82.0 356 30.6
TPR.G38520 Trifolium pratense HOM05D000802 ORTHO05D001074 1.8e-13 82.0 62 69.4
Thhalv10022323m.g Eutrema salsugineum HOM05D000802 ORTHO05D001074 4.0e-13 80.9 233 33.9
SEGI_19187 Sequoiadendron giganteum HOM05D000802 ORTHO05D001074 4.0e-13 80.9 64 65.6
Eucgr.G01765 Eucalyptus grandis HOM05D000802 ORTHO05D001074 6.8e-13 80.1 617 25.8
HanXRQChr07g0186861 Helianthus annuus HOM05D000802 ORTHO05D001074 1.2e-12 79.3 64 70.3
Potri.009G131300 Populus trichocarpa HOM05D000802 ORTHO05D001074 2.0e-12 78.6 64 59.4
BcaC05g28860 Brassica carinata HOM05D000802 ORTHO05D001074 3.4e-12 77.8 371 30.7
Medtr2g030630 Medicago truncatula HOM05D000802 ORTHO05D001074 7.5e-12 76.6 421 27.8
AL3G29540 Arabidopsis lyrata HOM05D000802 ORTHO05D001074 9.8e-12 76.3 337 31.8
Psat5g002920 Pisum sativum HOM05D000802 ORTHO05D001074 1.3e-11 75.9 252 29.4
Lsat_1_v5_gn_3_45921 Lactuca sativa HOM05D000802 ORTHO05D001074 2.2e-11 75.1 61 65.6
MD05G1117800 Malus domestica HOM05D000802 ORTHO05D001074 1.1e-10 72.8 710 23.8
arahy.Tifrunner.gnm1.ann1.RR6KZ0 Arachis hypogaea HOM05D000802 ORTHO05D001074 2.4e-10 71.6 564 24.3
arahy.Tifrunner.gnm1.ann1.C252F7 Arachis hypogaea HOM05D000802 ORTHO05D001074 5.4e-10 70.5 564 23.8
Thhalv10022525m.g Eutrema salsugineum HOM05D000802 ORTHO05D001074 5.4e-10 70.5 388 27.1
Os10g0548800 Oryza sativa ssp. japonica HOM05D000802 ORTHO05D001074 5.4e-10 70.5 66 63.6
Gohir.A12G038600 Gossypium hirsutum HOM05D000802 ORTHO05D001074 7.0e-10 70.1 433 25.4
THA.LOC104804335 Tarenaya hassleriana HOM05D000802 ORTHO05D001074 7.0e-10 70.1 415 26.3
TAR628G0247 Trochodendron aralioides HOM05D000802 ORTHO05D001074 9.2e-10 69.7 715 24.3
C03p08470 Brassica napus HOM05D000802 ORTHO05D001074 3.5e-09 67.8 58 65.5
Pp3c11_19560 Physcomitrium patens HOM05D000802 ORTHO05D001074 3.5e-09 67.8 63 60.3
Pp3c11_19567 Physcomitrium patens HOM05D000802 ORTHO05D001074 3.5e-09 67.8 63 60.3
TPR.G27837 Trifolium pratense HOM05D000802 ORTHO05D001074 1.3e-08 65.9 35 91.4
Actinidia20494 Actinidia chinensis HOM05D000802 ORTHO05D001074 2.3e-08 65.1 45 71.1
HanXRQChr15g0479031 Helianthus annuus HOM05D000802 ORTHO05D001074 3.0e-08 64.7 466 27.5
Actinidia00604 Actinidia chinensis HOM05D000802 ORTHO05D001074 3.9e-08 64.3 62 56.5
Pp3c7_3420 Physcomitrium patens HOM05D000802 ORTHO05D001074 3.9e-08 64.3 57 59.6
Sabra09G0101700 Salix brachista HOM05D000802 ORTHO05D001074 5.0e-08 63.9 49 61.2
CARHR106860 Cardamine hirsuta HOM05D000802 ORTHO05D001074 1.1e-07 62.8 366 27.6
Sed0016381 Sechium edule HOM05D000802 ORTHO05D001074 3.3e-07 61.2 61 55.7
SEGI_06882 Sequoiadendron giganteum HOM05D000802 ORTHO05D001074 5.6e-07 60.5 65 52.3
Ca_30774_v3 Cicer arietinum L. HOM05D000802 ORTHO05D001074 2.1e-06 58.5 32 87.5
Pp3c11_19540 Physcomitrium patens HOM05D000802 ORTHO05D001074 2.1e-06 58.5 39 71.8
Zm00001eb391770 Zea mays HOM05D000802 ORTHO05D001074 2.1e-06 58.5 66 53.0
AagrBONN_evm.TU.Sc2ySwM_368.630 Anthoceros agrestis HOM05D000802 ORTHO05D001074 2.8e-06 58.2 66 56.1
Mapoly0063s0085 Marchantia polymorpha HOM05D000802 ORTHO05D001074 2.8e-06 58.2 60 58.3


User provided reference genes

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