Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu063192.2 Olea europaea HOM05D003676 ORTHO05D004262 2.5e-184 648.7 340 100.0
Oeu012589.1 Olea europaea HOM05D003676 ORTHO05D004262 6.4e-119 431.4 348 71.8
Cc07_g10720 Coffea canephora HOM05D003676 ORTHO05D004262 8.2e-82 308.1 350 56.6
Dinv33627 Davidia involucrata HOM05D003676 ORTHO05D004262 5.5e-78 295.4 341 55.4
Dinv40087 Davidia involucrata HOM05D003676 ORTHO05D004262 1.2e-77 294.3 342 57.3
CSS0022685 Camellia sinensis var. sinensis HOM05D003676 ORTHO05D004262 2.2e-74 283.5 358 54.7
CSS0021991 Camellia sinensis var. sinensis HOM05D003676 ORTHO05D004262 7.7e-72 275.0 356 53.4
Hma1.2p1_0258F.1_g104145 Hydrangea macrophylla HOM05D003676 ORTHO05D004262 1.3e-71 274.2 356 54.2
Lj2A468T73 Lonicera japonica HOM05D003676 ORTHO05D004262 9.4e-70 268.1 359 51.3
QL06p032755 Quercus lobata HOM05D003676 ORTHO05D004262 2.1e-69 266.9 345 52.8
MSTRG.2714 Avicennia marina HOM05D003676 ORTHO05D004262 6.1e-69 265.4 348 52.6
Peaxi162Scf00083g00320 Petunia axillaris HOM05D003676 ORTHO05D004262 1.4e-68 264.2 342 53.5
Sopen02g028680 Solanum pennellii HOM05D003676 ORTHO05D004262 1.8e-68 263.8 344 54.1
Solyc02g083890.4 Solanum lycopersicum HOM05D003676 ORTHO05D004262 1.5e-67 260.8 344 53.8
Hma1.2p1_0956F.1_g241320 Hydrangea macrophylla HOM05D003676 ORTHO05D004262 1.3e-66 257.7 376 48.7
CAN.G1671.14 Capsicum annuum HOM05D003676 ORTHO05D004262 8.2e-66 255.0 352 53.1
CiPaw.07G058500 Carya illinoinensis HOM05D003676 ORTHO05D004262 8.2e-66 255.0 355 50.4
Sabra05G0093400 Salix brachista HOM05D003676 ORTHO05D004262 2.4e-65 253.4 358 51.4
PGSC0003DMG400003640 Solanum tuberosum HOM05D003676 ORTHO05D004262 4.1e-65 252.7 347 52.4
Potri.005G114100 Populus trichocarpa HOM05D003676 ORTHO05D004262 2.0e-64 250.4 358 50.0
SalBow3G1193 Salvia bowleyana HOM05D003676 ORTHO05D004262 3.4e-64 249.6 346 52.0
Oeu048461.1 Olea europaea HOM05D003676 ORTHO05D004262 1.0e-63 248.1 338 50.9
Nitab4.5_0005660g0010 Nicotiana tabacum HOM05D003676 ORTHO05D004262 1.7e-63 247.3 334 51.8
CSS0018215 Camellia sinensis var. sinensis HOM05D003676 ORTHO05D004262 2.2e-63 246.9 347 50.4
vmacro18414 Vaccinium macrocarpon HOM05D003676 ORTHO05D004262 1.4e-62 244.2 366 50.3
DCAR_016607 Daucus carota HOM05D003676 ORTHO05D004262 2.5e-62 243.4 355 49.6
Nitab4.5_0003382g0020 Nicotiana tabacum HOM05D003676 ORTHO05D004262 9.4e-62 241.5 337 52.2
Duzib187G0981 Durio zibethinus HOM05D003676 ORTHO05D004262 1.6e-61 240.7 360 48.3
Actinidia17444 Actinidia chinensis HOM05D003676 ORTHO05D004262 2.1e-61 240.4 345 50.4
Eucgr.I02350 Eucalyptus grandis HOM05D003676 ORTHO05D004262 3.6e-61 239.6 357 46.8
Ciclev10025949m.g Citrus clementina HOM05D003676 ORTHO05D004262 3.0e-60 236.5 345 49.0
MD15G1246000 Malus domestica HOM05D003676 ORTHO05D004262 3.0e-60 236.5 356 49.2
RcHm_v2.0_Chr2g0099451 Rosa chinensis HOM05D003676 ORTHO05D004262 3.0e-60 236.5 340 50.0
MD02G1132500 Malus domestica HOM05D003676 ORTHO05D004262 3.9e-60 236.1 337 49.3
Manes.01G145700 Manihot esculenta HOM05D003676 ORTHO05D004262 3.3e-59 233.0 336 48.8
TAR376G0994 Trochodendron aralioides HOM05D003676 ORTHO05D004262 7.4e-59 231.9 340 49.7
Actinidia30997 Actinidia chinensis HOM05D003676 ORTHO05D004262 9.7e-59 231.5 345 49.3
ClCG10G000750 Citrullus lanatus HOM05D003676 ORTHO05D004262 9.7e-59 231.5 341 47.5
Lalb_Chr05g0212401 Lupinus albus HOM05D003676 ORTHO05D004262 3.7e-58 229.6 344 48.0
Thecc.01G019000 Theobroma cacao HOM05D003676 ORTHO05D004262 6.3e-58 228.8 349 48.4
Lj4g0000664 Lotus japonicus HOM05D003676 ORTHO05D004262 1.1e-57 228.0 341 48.1
Manes.02G104500 Manihot esculenta HOM05D003676 ORTHO05D004262 1.1e-57 228.0 334 49.7
Prupe.7G168100 Prunus persica HOM05D003676 ORTHO05D004262 2.4e-57 226.9 356 48.0
Cfa006972 Carpinus fangiana HOM05D003676 ORTHO05D004262 3.1e-57 226.5 347 50.1
Rhsim10G0212200 Rhododendron simsii HOM05D003676 ORTHO05D004262 3.1e-57 226.5 357 47.9
unitig_736.g22721 Utricularia gibba HOM05D003676 ORTHO05D004262 4.1e-57 226.1 346 46.5
Hund16490 Selenicereus undatus HOM05D003676 ORTHO05D004262 7.0e-57 225.3 361 44.9
TAR381G0332 Trochodendron aralioides HOM05D003676 ORTHO05D004262 7.0e-57 225.3 352 47.4
arahy.Tifrunner.gnm1.ann1.3LB61T Arachis hypogaea HOM05D003676 ORTHO05D004262 9.1e-57 224.9 333 48.9
arahy.Tifrunner.gnm1.ann1.CCI0LY Arachis hypogaea HOM05D003676 ORTHO05D004262 1.5e-56 224.2 330 49.1
Sed0017342 Sechium edule HOM05D003676 ORTHO05D004262 1.5e-56 224.2 346 48.0
MELO3C013767.2 Cucumis melo HOM05D003676 ORTHO05D004262 5.9e-56 222.2 357 47.1
Nn5g30150 Nelumbo nucifera HOM05D003676 ORTHO05D004262 1.3e-55 221.1 361 46.3
FAN26G1220 Fragaria x ananassa HOM05D003676 ORTHO05D004262 1.5e-54 217.6 336 47.9
Atru.chr3.798 Acer truncatum HOM05D003676 ORTHO05D004262 4.2e-54 216.1 351 47.0
Rhsim08G0033700 Rhododendron simsii HOM05D003676 ORTHO05D004262 9.4e-54 214.9 352 47.7
AUR62029464 Chenopodium quinoa HOM05D003676 ORTHO05D004262 2.1e-53 213.8 333 47.7
CANSAT01G0038 Cannabis sativa HOM05D003676 ORTHO05D004262 3.6e-53 213.0 349 45.8
FvH4_1g11840 Fragaria vesca HOM05D003676 ORTHO05D004262 4.7e-53 212.6 350 45.4
TWI09G1351 Tripterygium wilfordii HOM05D003676 ORTHO05D004262 1.1e-51 208.0 295 49.2
FAN19G1818 Fragaria x ananassa HOM05D003676 ORTHO05D004262 1.5e-51 207.6 340 45.6
MBI05_g37447_MAGBIO Magnolia biondii HOM05D003676 ORTHO05D004262 1.5e-51 207.6 338 47.0
CsaV3_3G000800 Cucumis sativus L. HOM05D003676 ORTHO05D004262 2.0e-51 207.2 345 45.5
FAN23G0443 Fragaria x ananassa HOM05D003676 ORTHO05D004262 2.6e-51 206.8 333 46.2
Lj4A218T52 Lonicera japonica HOM05D003676 ORTHO05D004262 2.6e-51 206.8 335 46.9
Psat4g099080 Pisum sativum HOM05D003676 ORTHO05D004262 2.6e-51 206.8 352 44.3
TAR628G0168 Trochodendron aralioides HOM05D003676 ORTHO05D004262 3.3e-51 206.5 337 44.8
Gohir.A11G175400 Gossypium hirsutum HOM05D003676 ORTHO05D004262 1.3e-50 204.5 340 47.1
Glyma.16G128800 Glycine max HOM05D003676 ORTHO05D004262 6.3e-50 202.2 352 44.9
Cpa.g.sc6.251 Carica papaya HOM05D003676 ORTHO05D004262 1.8e-49 200.7 346 46.5
ECA232G1625 Erigeron canadensis HOM05D003676 ORTHO05D004262 1.8e-49 200.7 343 43.4
Hund14045 Selenicereus undatus HOM05D003676 ORTHO05D004262 2.4e-49 200.3 343 44.6
Nn1g05889 Nelumbo nucifera HOM05D003676 ORTHO05D004262 7.0e-49 198.7 335 45.7
Gohir.D11G182900 Gossypium hirsutum HOM05D003676 ORTHO05D004262 9.1e-49 198.4 350 44.6
PGR119G1864 Punica granatum HOM05D003676 ORTHO05D004262 1.2e-48 198.0 353 45.0
VMungo0251G0225 Vigna mungo HOM05D003676 ORTHO05D004262 2.0e-48 197.2 346 47.4
Medtr8g075950 Medicago truncatula HOM05D003676 ORTHO05D004262 3.5e-48 196.4 336 45.2
Actinidia22976 Actinidia chinensis HOM05D003676 ORTHO05D004262 5.9e-48 195.7 258 51.9
Duzib264G0036 Durio zibethinus HOM05D003676 ORTHO05D004262 5.9e-48 195.7 344 46.5
PSO675G7127 Papaver somniferum HOM05D003676 ORTHO05D004262 7.7e-48 195.3 348 44.0
Phvul.003G262100 Phaseolus vulgaris HOM05D003676 ORTHO05D004262 7.7e-48 195.3 335 47.5
HanXRQChr09g0256601 Helianthus annuus HOM05D003676 ORTHO05D004262 1.3e-47 194.5 331 42.6
PSO541G5658 Papaver somniferum HOM05D003676 ORTHO05D004262 5.0e-47 192.6 344 43.6
Gohir.D11G183000 Gossypium hirsutum HOM05D003676 ORTHO05D004262 8.5e-47 191.8 313 46.3
TPR.G30058 Trifolium pratense HOM05D003676 ORTHO05D004262 8.5e-47 191.8 333 43.5
Carub.0008s2827 Capsella rubella HOM05D003676 ORTHO05D004262 2.5e-46 190.3 332 44.3
Aa31LG1G14730 Aethionema arabicum HOM05D003676 ORTHO05D004262 9.4e-46 188.3 342 44.4
unitig_899.g14713 Utricularia gibba HOM05D003676 ORTHO05D004262 1.6e-45 187.6 301 44.2
COL.COLO4_21910 Corchorus olitorius HOM05D003676 ORTHO05D004262 2.1e-45 187.2 355 43.9
CARHR281500 Cardamine hirsuta HOM05D003676 ORTHO05D004262 2.7e-45 186.8 343 44.9
Gorai.007G195000 Gossypium raimondii HOM05D003676 ORTHO05D004262 2.7e-45 186.8 313 44.4
AT5G66230 Arabidopsis thaliana HOM05D003676 ORTHO05D003783 1.0e-44 184.9 347 42.9
Glyma.01G166300 Glycine max HOM05D003676 ORTHO05D004262 1.8e-44 184.1 349 47.0
GSVIVG01018782001 Vitis vinifera HOM05D003676 ORTHO05D004262 3.0e-44 183.3 263 50.2
Gorai.007G194900 Gossypium raimondii HOM05D003676 ORTHO05D004262 4.0e-44 183.0 378 40.7
Gorai.008G063100 Gossypium raimondii HOM05D003676 ORTHO05D004262 1.2e-43 181.4 333 41.7
SGA_v2.0_scaffold78G25382 Striga asiatica HOM05D003676 ORTHO05D004262 1.2e-43 181.4 335 43.0
Aqoxy6G02292 Aquilegia oxysepala HOM05D003676 ORTHO05D004262 4.4e-43 179.5 348 40.8
MBI05_g30743_MAGBIO Magnolia biondii HOM05D003676 ORTHO05D004262 1.3e-42 177.9 335 41.2
Glyma.02G048700 Glycine max HOM05D003676 ORTHO05D004262 1.7e-42 177.6 340 42.4
Gohir.A12G059600 Gossypium hirsutum HOM05D003676 ORTHO05D004262 1.7e-42 177.6 337 40.4
FAN28G1902 Fragaria x ananassa HOM05D003676 ORTHO05D004262 2.2e-42 177.2 331 42.3
Gohir.D12G060000 Gossypium hirsutum HOM05D003676 ORTHO05D004262 2.8e-42 176.8 334 41.3
Ca_22374_v3 Cicer arietinum L. HOM05D003676 ORTHO05D004262 3.7e-42 176.4 316 41.5
Thhalv10004614m.g Eutrema salsugineum HOM05D003676 ORTHO05D004262 4.8e-42 176.0 344 42.7
Lsat_1_v5_gn_4_146360 Lactuca sativa HOM05D003676 ORTHO05D004262 6.3e-42 175.6 326 41.7
AUR62003369 Chenopodium quinoa HOM05D003676 ORTHO05D004262 8.3e-42 175.3 342 42.7
HanXRQChr15g0487251 Helianthus annuus HOM05D003676 ORTHO05D004262 1.1e-41 174.9 331 42.3
THA.LOC104819178 Tarenaya hassleriana HOM05D003676 ORTHO05D004262 1.8e-41 174.1 338 41.4
Potri.007G057800 Populus trichocarpa HOM05D003676 ORTHO05D004262 7.0e-41 172.2 360 40.8
Sp2g30470 Schrenkiella parvula HOM05D003676 ORTHO05D004262 7.7e-40 168.7 344 42.2
Ah.03g148760 Amaranthus hybridus HOM05D003676 ORTHO05D004262 3.8e-39 166.4 305 43.0
Lsat_1_v5_gn_3_74521 Lactuca sativa HOM05D003676 ORTHO05D004262 8.5e-39 165.2 311 40.8
BolC9t54086H Brassica oleracea HOM05D003676 ORTHO05D004262 1.9e-38 164.1 335 43.0
Sc07g0000980 Simmondsia chinensis HOM05D003676 ORTHO05D004262 4.2e-38 162.9 297 42.4
C09p11980 Brassica napus HOM05D003676 ORTHO05D004262 9.4e-38 161.8 338 42.6
Haze_03763 Corylus avellana HOM05D003676 ORTHO05D004262 9.4e-38 161.8 186 57.0
AL8G45300 Arabidopsis lyrata HOM05D003676 ORTHO05D004262 1.6e-37 161.0 237 50.2
A09p10110 Brassica napus HOM05D003676 ORTHO05D004262 1.6e-37 161.0 339 43.4
Sc16g0002190 Simmondsia chinensis HOM05D003676 ORTHO05D004262 4.7e-37 159.5 328 39.3
BraA09t36654Z Brassica rapa HOM05D003676 ORTHO05D004262 2.3e-36 157.1 332 41.0
Glyma.11G077200 Glycine max HOM05D003676 ORTHO05D004262 3.0e-36 156.8 339 45.1
Gohir.A02G170700 Gossypium hirsutum HOM05D003676 ORTHO05D004262 3.0e-36 156.8 415 37.3
HPP92_020902 Vanilla planifolia HOM05D003676 ORTHO05D004262 3.0e-36 156.8 346 39.9
CDE05G2608 Ceratophyllum demersum HOM05D003676 ORTHO05D004262 4.0e-36 156.4 325 40.0
TWI53G0168 Tripterygium wilfordii HOM05D003676 ORTHO05D004262 8.8e-36 155.2 352 39.8
Ca_25824_v3 Cicer arietinum L. HOM05D003676 ORTHO05D004262 2.0e-35 154.1 336 43.2
Migut.H01153 Erythranthe guttata HOM05D003676 ORTHO05D004262 4.4e-35 152.9 349 39.3
Gohir.D03G009400 Gossypium hirsutum HOM05D003676 ORTHO05D004262 7.5e-35 152.1 416 37.0
Medtr5g022010 Medicago truncatula HOM05D003676 ORTHO05D004262 2.4e-33 147.1 337 38.3
PGSC0003DMG400023891 Solanum tuberosum HOM05D003676 ORTHO05D004262 5.4e-33 146.0 301 41.2
Solyc02g062170.3 Solanum lycopersicum HOM05D003676 ORTHO05D004262 7.0e-33 145.6 286 39.5
ECA246G1385 Erigeron canadensis HOM05D003676 ORTHO05D004262 1.2e-32 144.8 305 41.0
SHI32179 Sapria himalayana HOM05D003676 ORTHO05D004262 2.7e-32 143.7 307 40.1
Sopen02g013140 Solanum pennellii HOM05D003676 ORTHO05D004262 1.7e-31 141.0 286 37.4
Gorai.003G009600 Gossypium raimondii HOM05D003676 ORTHO05D004262 2.3e-31 140.6 345 40.6
Phvul.002G108800 Phaseolus vulgaris HOM05D003676 ORTHO05D004262 2.9e-31 140.2 289 44.3
ATR0149G006 Amborella trichopoda HOM05D003676 ORTHO05D004262 5.0e-31 139.4 357 37.5
Zm00001eb224920 Zea mays HOM05D003676 ORTHO05D004262 1.5e-30 137.9 361 36.0
DCAR_025998 Daucus carota HOM05D003676 ORTHO05D004262 4.3e-30 136.3 253 44.3
Zm00001eb024930 Zea mays HOM05D003676 ORTHO05D004262 5.6e-30 136.0 354 35.9
CDE05G0776 Ceratophyllum demersum HOM05D003676 ORTHO05D004262 2.8e-29 133.7 299 40.5
Nn1g05888 Nelumbo nucifera HOM05D003676 ORTHO05D004262 2.8e-29 133.7 348 35.9
Os10g0577400 Oryza sativa ssp. japonica HOM05D003676 ORTHO05D004262 4.7e-29 132.9 347 35.7
TPR.G18183 Trifolium pratense HOM05D003676 ORTHO05D004262 6.1e-29 132.5 342 38.6
AL5G31630 Arabidopsis lyrata HOM05D003676 ORTHO05D004262 1.4e-28 131.3 322 36.6
Nitab4.5_0000188g0110 Nicotiana tabacum HOM05D003676 ORTHO05D004262 4.0e-28 129.8 218 47.7
Nitab4.5_0002337g0030 Nicotiana tabacum HOM05D003676 ORTHO05D004262 4.4e-27 126.3 336 36.3
AT3G51230 Arabidopsis thaliana HOM05D003676 ORTHO05D004262 7.5e-27 125.6 214 43.5
BcaC09g50089 Brassica carinata HOM05D003676 ORTHO05D004262 2.9e-26 123.6 212 42.9
C01p29220 Brassica napus HOM05D003676 ORTHO05D004262 2.9e-26 123.6 212 42.9
Sp5g10990 Schrenkiella parvula HOM05D003676 ORTHO05D004262 2.9e-26 123.6 329 35.9
BcaNung00393 Brassica carinata HOM05D003676 ORTHO05D004262 6.4e-26 122.5 288 38.9
Psat2g154560 Pisum sativum HOM05D003676 ORTHO05D004262 4.1e-25 119.8 333 36.9
A01p23560 Brassica napus HOM05D003676 ORTHO05D004262 7.0e-25 119.0 331 33.2
BraA01t02262Z Brassica rapa HOM05D003676 ORTHO05D004262 7.0e-25 119.0 331 33.2
CARHR160810 Cardamine hirsuta HOM05D003676 ORTHO05D004262 1.2e-24 118.2 218 44.0
SEGI_09532 Sequoiadendron giganteum HOM05D003676 ORTHO05D004262 1.2e-24 118.2 336 34.8
SEGI_21114 Sequoiadendron giganteum HOM05D003676 ORTHO05D004262 1.2e-24 118.2 336 34.8
Lalb_Chr09g0321731 Lupinus albus HOM05D003676 ORTHO05D004262 1.6e-24 117.9 332 36.1
HanXRQChr16g0531461 Helianthus annuus HOM05D003676 ORTHO05D004262 1.3e-23 114.8 237 38.8
vmacro23249 Vaccinium macrocarpon HOM05D003676 ORTHO05D004262 3.0e-23 113.6 220 41.4
vmacro23473 Vaccinium macrocarpon HOM05D003676 ORTHO05D004262 3.0e-23 113.6 220 41.4
Carub.0005s1760 Capsella rubella HOM05D003676 ORTHO05D004262 2.1e-21 107.5 234 39.7
Atru.chr1.3640 Acer truncatum HOM05D003676 ORTHO05D004262 1.0e-20 105.1 140 55.7
RcHm_v2.0_Chr6g0272671 Rosa chinensis HOM05D003676 ORTHO05D004262 2.6e-19 100.5 138 48.6
BcaNung04494 Brassica carinata HOM05D003676 ORTHO05D004262 5.4e-17 92.8 229 35.8
Gorai.010G060700 Gossypium raimondii HOM05D003676 ORTHO05D004262 5.4e-17 92.8 216 41.2
SEGI_24904 Sequoiadendron giganteum HOM05D003676 ORTHO05D004262 3.3e-14 83.6 285 33.0
Atru.chr1.3647 Acer truncatum HOM05D003676 ORTHO05D004262 5.2e-12 76.3 354 32.5
vmacro22131 Vaccinium macrocarpon HOM05D003676 ORTHO05D004262 7.5e-11 72.4 220 34.1
Nn1g06616 Nelumbo nucifera HOM05D003676 ORTHO05D004262 1.7e-10 71.2 113 46.9
Gohir.D09G239350 Gossypium hirsutum HOM05D003676 ORTHO05D004262 5.4e-09 66.2 58 60.3
Gorai.006G262100 Gossypium raimondii HOM05D003676 ORTHO05D004262 1.2e-08 65.1 58 58.6
PSO700G0244 Papaver somniferum HOM05D065651 ORTHO05D004262 7.8e-08 62.4 253 32.4
TAR629G3197 Trochodendron aralioides HOM05D003676 ORTHO05D004262 1.3e-07 61.6 91 46.2
Mapoly0004s0127 Marchantia polymorpha HOM05D003676 ORTHO05D030105 3.9e-07 60.1 441 27.9
PSO170G2947 Papaver somniferum HOM05D065651 ORTHO05D004262 6.6e-07 59.3 251 31.9


User provided reference genes

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