Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu063165.1 Olea europaea HOM05D005495 ORTHO05D006878 3.4e-175 618.2 309 100.0
Oeu063167.2 Olea europaea HOM05D005495 ORTHO05D006878 3.4e-175 618.2 309 100.0
SGA_v2.0_scaffold5G02973 Striga asiatica HOM05D005495 ORTHO05D006878 2.7e-47 193.4 309 40.1
Nitab4.5_0003998g0040 Nicotiana tabacum HOM05D005495 ORTHO05D006878 4.5e-47 192.6 309 42.4
Nitab4.5_0000978g0010 Nicotiana tabacum HOM05D005495 ORTHO05D006878 7.7e-47 191.8 309 42.1
PGSC0003DMG400004682 Solanum tuberosum HOM05D005495 ORTHO05D006878 1.3e-46 191.0 309 42.7
Solyc12g098890.2 Solanum lycopersicum HOM05D005495 ORTHO05D006878 6.6e-46 188.7 309 42.4
Sopen12g033640 Solanum pennellii HOM05D005495 ORTHO05D006878 6.6e-46 188.7 309 42.4
MSTRG.28074 Avicennia marina HOM05D005495 ORTHO05D006878 1.2e-44 184.5 304 41.8
CAN.G484.95 Capsicum annuum HOM05D005495 ORTHO05D006878 2.1e-44 183.7 309 43.4
Peaxi162Scf00323g00929 Petunia axillaris HOM05D005495 ORTHO05D006878 2.8e-44 183.3 309 41.7
CSS0010244 Camellia sinensis var. sinensis HOM05D005495 ORTHO05D006878 8.0e-44 181.8 306 40.8
Dinv26490 Davidia involucrata HOM05D005495 ORTHO05D006878 1.0e-43 181.4 305 41.0
CiPaw.02G068300 Carya illinoinensis HOM05D005495 ORTHO05D006878 6.8e-43 178.7 308 41.2
QL06p014840 Quercus lobata HOM05D005495 ORTHO05D006878 8.9e-43 178.3 310 40.6
Cfa015763 Carpinus fangiana HOM05D005495 ORTHO05D006878 1.2e-42 177.9 267 43.4
Lsat_1_v5_gn_5_109481 Lactuca sativa HOM05D005495 ORTHO05D006878 1.5e-42 177.6 310 39.7
FvH4_4g21870 Fragaria vesca HOM05D005495 ORTHO05D006878 2.0e-42 177.2 305 41.3
GSVIVG01017720001 Vitis vinifera HOM05D005495 ORTHO05D006878 2.0e-42 177.2 303 40.9
RcHm_v2.0_Chr4g0428131 Rosa chinensis HOM05D005495 ORTHO05D006878 3.4e-42 176.4 305 41.0
FAN12G1024 Fragaria x ananassa HOM05D005495 ORTHO05D006878 4.4e-42 176.0 305 41.3
Prupe.1G209300 Prunus persica HOM05D005495 ORTHO05D006878 4.4e-42 176.0 308 40.9
HanXRQChr16g0513961 Helianthus annuus HOM05D005495 ORTHO05D006878 7.5e-42 175.3 311 38.9
MD13G1136100 Malus domestica HOM05D005495 ORTHO05D006878 7.5e-42 175.3 308 40.9
Atru.chr4.3197 Acer truncatum HOM05D005495 ORTHO05D006878 9.8e-42 174.9 299 40.5
FAN07G0874 Fragaria x ananassa HOM05D005495 ORTHO05D006878 9.8e-42 174.9 305 41.0
MD16G1131500 Malus domestica HOM05D005495 ORTHO05D006878 1.3e-41 174.5 308 41.9
Ah.13g073090 Amaranthus hybridus HOM05D005495 ORTHO05D006878 1.7e-41 174.1 307 40.7
Cc04_g13640 Coffea canephora HOM05D005495 ORTHO05D006878 2.2e-41 173.7 310 41.3
FAN17G0375 Fragaria x ananassa HOM05D005495 ORTHO05D006878 3.7e-41 172.9 305 40.7
Nn1g08285 Nelumbo nucifera HOM05D005495 ORTHO05D006878 3.7e-41 172.9 305 40.3
Potri.010G005000 Populus trichocarpa HOM05D005495 ORTHO05D006878 3.7e-41 172.9 289 42.2
TAR362G1223 Trochodendron aralioides HOM05D005495 ORTHO05D006878 6.4e-41 172.2 305 39.7
AUR62023677 Chenopodium quinoa HOM05D005495 ORTHO05D006878 8.3e-41 171.8 306 39.5
Ciclev10022561m.g Citrus clementina HOM05D005495 ORTHO05D006878 8.3e-41 171.8 304 39.8
EL10Ac3g06214 Beta vulgaris HOM05D005495 ORTHO05D006878 1.4e-40 171.0 276 40.9
Carub.0001s3747 Capsella rubella HOM05D005495 ORTHO05D006878 1.4e-40 171.0 313 39.6
AT1G48350 Arabidopsis thaliana HOM05D005495 ORTHO05D006878 1.8e-40 170.6 312 39.4
PSO170G2754 Papaver somniferum HOM05D005495 ORTHO05D006878 2.4e-40 170.2 305 40.0
Thecc.09G200200 Theobroma cacao HOM05D005495 ORTHO05D006878 2.4e-40 170.2 269 42.4
Actinidia33011 Actinidia chinensis HOM05D005495 ORTHO05D006878 3.2e-40 169.9 305 38.7
Actinidia35901 Actinidia chinensis HOM05D005495 ORTHO05D006878 3.2e-40 169.9 305 39.0
AL1G54950 Arabidopsis lyrata HOM05D005495 ORTHO05D006878 3.2e-40 169.9 312 39.4
ECA234G1716 Erigeron canadensis HOM05D005495 ORTHO05D006878 3.2e-40 169.9 312 38.1
Nn5g29782 Nelumbo nucifera HOM05D005495 ORTHO05D006878 3.2e-40 169.9 305 40.7
Sed0015702 Sechium edule HOM05D005495 ORTHO05D006878 3.2e-40 169.9 311 41.2
Sabra10G0004200 Salix brachista HOM05D005495 ORTHO05D006878 4.1e-40 169.5 283 42.0
Sp1g35300 Schrenkiella parvula HOM05D005495 ORTHO05D006878 4.1e-40 169.5 312 39.1
ClCG05G007000 Citrullus lanatus HOM05D005495 ORTHO05D006878 7.0e-40 168.7 311 40.2
PGR004G2778 Punica granatum HOM05D005495 ORTHO05D006878 7.0e-40 168.7 272 41.2
CARHR037960 Cardamine hirsuta HOM05D005495 ORTHO05D006878 9.2e-40 168.3 316 39.2
Hund12271 Selenicereus undatus HOM05D005495 ORTHO05D006878 9.2e-40 168.3 304 39.1
Hund12272 Selenicereus undatus HOM05D005495 ORTHO05D006878 9.2e-40 168.3 304 39.1
BcaB04g17437 Brassica carinata HOM05D005495 ORTHO05D006878 1.2e-39 167.9 306 39.9
A08p04780 Brassica napus HOM05D005495 ORTHO05D006878 1.2e-39 167.9 313 39.6
Eucgr.L01079 Eucalyptus grandis HOM05D005495 ORTHO05D006878 1.2e-39 167.9 311 38.6
vmacro00585 Vaccinium macrocarpon HOM05D005495 ORTHO05D006878 1.6e-39 167.5 291 40.2
C08p05150 Brassica napus HOM05D005495 ORTHO05D006878 2.7e-39 166.8 313 39.6
BolC8t47325H Brassica oleracea HOM05D005495 ORTHO05D006878 2.7e-39 166.8 313 39.6
BraA08t32508Z Brassica rapa HOM05D005495 ORTHO05D006878 2.7e-39 166.8 313 39.6
BcaC07g37142 Brassica carinata HOM05D005495 ORTHO05D006878 3.5e-39 166.4 313 39.6
Thhalv10011822m.g Eutrema salsugineum HOM05D005495 ORTHO05D006878 3.5e-39 166.4 304 38.8
HanXRQChr10g0290461 Helianthus annuus HOM05D005495 ORTHO05D006878 3.5e-39 166.4 306 36.9
Manes.01G048400 Manihot esculenta HOM05D005495 ORTHO05D006878 3.5e-39 166.4 293 42.0
PSO357G0664 Papaver somniferum HOM05D005495 ORTHO05D006878 3.5e-39 166.4 305 39.0
Sed0019465 Sechium edule HOM05D005495 ORTHO05D006878 3.5e-39 166.4 311 39.9
CsaV3_3G015690 Cucumis sativus L. HOM05D005495 ORTHO05D006878 4.6e-39 166.0 311 39.2
MELO3C006766.2 Cucumis melo HOM05D005495 ORTHO05D006878 5.9e-39 165.6 311 39.5
DCAR_026923 Daucus carota HOM05D005495 ORTHO05D006878 1.3e-38 164.5 268 40.7
Gorai.004G096600 Gossypium raimondii HOM05D005495 ORTHO05D006878 1.3e-38 164.5 268 40.7
MBI18_g28932_MAGBIO Magnolia biondii HOM05D005495 ORTHO05D006878 2.3e-38 163.7 271 40.6
Aqoxy5G02875 Aquilegia oxysepala HOM05D005495 ORTHO05D006878 3.0e-38 163.3 303 38.9
Eucgr.B02183 Eucalyptus grandis HOM05D005495 ORTHO05D006878 3.0e-38 163.3 266 40.6
Sc25g0002370 Simmondsia chinensis HOM05D005495 ORTHO05D006878 3.0e-38 163.3 303 38.3
ATR0561G067 Amborella trichopoda HOM05D005495 ORTHO05D006878 3.9e-38 162.9 307 38.4
Gohir.D08G091100 Gossypium hirsutum HOM05D005495 ORTHO05D006878 3.9e-38 162.9 268 40.3
CANSAT01G2767 Cannabis sativa HOM05D005495 ORTHO05D006878 5.0e-38 162.5 272 40.1
Aa31LG10G5410 Aethionema arabicum HOM05D005495 ORTHO05D006878 6.6e-38 162.2 311 38.3
THA.LOC104821817 Tarenaya hassleriana HOM05D005495 ORTHO05D006878 8.6e-38 161.8 311 37.3
Gohir.A08G081800 Gossypium hirsutum HOM05D005495 ORTHO05D006878 1.1e-37 161.4 268 40.3
Lj3A842T60 Lonicera japonica HOM05D005495 ORTHO05D006878 1.1e-37 161.4 319 37.3
Ca_02315_v3 Cicer arietinum L. HOM05D005495 ORTHO05D006878 5.6e-37 159.1 267 40.4
Psat1g016560 Pisum sativum HOM05D005495 ORTHO05D006878 5.6e-37 159.1 267 39.7
Rhsim09G0032900 Rhododendron simsii HOM05D005495 ORTHO05D006878 5.6e-37 159.1 291 38.5
Duzib251G0959 Durio zibethinus HOM05D005495 ORTHO05D006878 7.3e-37 158.7 269 40.5
COL.COLO4_35587 Corchorus olitorius HOM05D005495 ORTHO05D006878 2.1e-36 157.1 266 39.8
Duzib177G0638 Durio zibethinus HOM05D005495 ORTHO05D006878 2.1e-36 157.1 266 40.6
VMungo1309G3094 Vigna mungo HOM05D005495 ORTHO05D006878 2.8e-36 156.8 271 38.7
Lalb_Chr11g0073801 Lupinus albus HOM05D005495 ORTHO05D006878 3.6e-36 156.4 267 40.1
Lalb_Chr08g0232951 Lupinus albus HOM05D005495 ORTHO05D006878 6.2e-36 155.6 267 39.7
Lj6g0020934 Lotus japonicus HOM05D005495 ORTHO05D006878 8.0e-36 155.2 267 39.7
Nn2g14382 Nelumbo nucifera HOM05D005495 ORTHO05D006878 1.4e-35 154.5 270 40.4
Glyma.09G077600 Glycine max HOM05D005495 ORTHO05D006878 4.0e-35 152.9 267 38.6
arahy.Tifrunner.gnm1.ann1.9LP875 Arachis hypogaea HOM05D005495 ORTHO05D006878 5.2e-35 152.5 267 38.2
arahy.Tifrunner.gnm1.ann1.47CT68 Arachis hypogaea HOM05D005495 ORTHO05D006878 6.8e-35 152.1 267 38.6
CDE02G3134 Ceratophyllum demersum HOM05D005495 ORTHO05D006878 8.9e-35 151.8 266 39.8
Phvul.009G221700 Phaseolus vulgaris HOM05D005495 ORTHO05D006878 8.9e-35 151.8 281 38.1
arahy.Tifrunner.gnm1.ann1.C7LR0V Arachis hypogaea HOM05D005495 ORTHO05D006878 1.5e-34 151.0 267 38.2
CSS0024695 Camellia sinensis var. sinensis HOM05D005495 ORTHO05D006878 1.5e-34 151.0 365 34.2
arahy.Tifrunner.gnm1.ann1.7J6TQU Arachis hypogaea HOM05D005495 ORTHO05D006878 3.4e-34 149.8 267 38.2
TPR.G18013 Trifolium pratense HOM05D005495 ORTHO05D006878 4.4e-34 149.4 267 38.6
Glyma.15G185000 Glycine max HOM05D005495 ORTHO05D006878 5.8e-34 149.1 267 37.8
Medtr2g044920 Medicago truncatula HOM05D005495 ORTHO05D006878 5.8e-34 149.1 260 38.1
CDE11G0957 Ceratophyllum demersum HOM05D005495 ORTHO05D006878 7.5e-34 148.7 308 36.7
Haze_00740 Corylus avellana HOM05D005495 ORTHO05D006878 7.5e-34 148.7 324 35.5
HPP92_026860 Vanilla planifolia HOM05D005495 ORTHO05D006878 6.4e-33 145.6 271 37.3
CSS0009878 Camellia sinensis var. sinensis HOM05D005495 ORTHO05D006878 6.0e-31 139.0 355 32.4
arahy.Tifrunner.gnm1.ann1.U7ILUP Arachis hypogaea HOM05D005495 ORTHO05D006878 1.3e-30 137.9 287 35.2
SEGI_23609 Sequoiadendron giganteum HOM05D005495 ORTHO05D006878 1.9e-29 134.0 270 36.7
unitig_22.g5836 Utricularia gibba HOM05D005495 ORTHO05D006878 4.7e-28 129.4 261 37.2
Zm00001eb063340 Zea mays HOM05D005495 ORTHO05D006878 8.1e-28 128.6 279 34.1
Nn6g34060 Nelumbo nucifera HOM05D005495 ORTHO05D006878 6.8e-27 125.6 69 91.3
Actinidia04610 Actinidia chinensis HOM05D005495 ORTHO05D006878 8.9e-27 125.2 239 36.8
SEGI_13687 Sequoiadendron giganteum HOM05D005495 ORTHO05D006878 1.2e-26 124.8 270 35.6
Pp3c11_5070 Physcomitrium patens HOM05D005495 ORTHO05D006878 1.6e-23 114.4 269 33.5
Mapoly0060s0071 Marchantia polymorpha HOM05D005495 ORTHO05D006878 4.6e-23 112.8 268 32.8
Pp3c7_24650 Physcomitrium patens HOM05D005495 ORTHO05D006878 1.3e-22 111.3 272 32.4
AagrBONN_evm.TU.Sc2ySwM_368.2340 Anthoceros agrestis HOM05D005495 ORTHO05D006878 1.7e-22 110.9 268 32.5
SMO347G0648 Selaginella moellendorffii HOM05D005495 ORTHO05D006878 3.0e-22 110.2 252 32.1
Pp3c1_8470 Physcomitrium patens HOM05D005495 ORTHO05D006878 1.1e-21 108.2 286 32.2
TAR633G1063 Trochodendron aralioides HOM05D005495 ORTHO05D006878 2.5e-21 107.1 306 31.4
Nn1g06332 Nelumbo nucifera HOM05D005495 ORTHO05D006878 1.6e-20 104.4 229 34.1
A02p02410 Brassica napus HOM05D005495 ORTHO05D041539 7.6e-18 95.5 57 78.9
BraA09t40268Z Brassica rapa HOM05D005495 ORTHO05D041539 7.6e-18 95.5 57 78.9
Hma1.2p1_0050F.1_g029170 Hydrangea macrophylla HOM05D005495 ORTHO05D006878 9.9e-18 95.1 49 91.8
AUR62002518 Chenopodium quinoa HOM05D005495 ORTHO05D006878 2.2e-17 94.0 51 84.3
CBR_g48702 Chara braunii HOM05D005495 ORTHO05D006878 2.9e-17 93.6 268 29.5
Cpa.g.sc146.3 Carica papaya HOM05D005495 ORTHO05D006878 3.8e-17 93.2 51 84.3
C09p43950 Brassica napus HOM05D005495 ORTHO05D006878 1.6e-15 87.8 53 79.2
Oeu047569.1 Olea europaea HOM05D005495 ORTHO05D006878 1.6e-15 87.8 60 76.7
Hma1.2p1_0050F.1_g029160 Hydrangea macrophylla HOM05D000032 ORTHO05D007378 3.5e-15 86.7 44 93.2
A06p04520 Brassica napus HOM05D005495 ORTHO05D006878 7.8e-15 85.5 56 75.0
Pp3c1_1240 Physcomitrium patens HOM05D005495 ORTHO05D006878 3.3e-13 80.1 272 27.6
Cre01.g052100 Chlamydomonas reinhardtii HOM05D005495 ORTHO05D006878 2.8e-12 77.0 78 51.3
C05p41600 Brassica napus HOM05D001349 ORTHO05D027195 4.7e-12 76.3 42 81.0
Nn3g20978 Nelumbo nucifera HOM05D005495 ORTHO05D006878 1.5e-10 71.2 38 89.5
MCO16G312 Micromonas commoda HOM05D005495 ORTHO05D006878 4.4e-10 69.7 266 23.3
Rhsim12G0064100 Rhododendron simsii HOM05D005738 ORTHO05D007135 4.9e-09 66.2 102 38.2
Nitab4.5_0003950g0020 Nicotiana tabacum HOM05D005738 ORTHO05D007135 1.9e-08 64.3 113 33.6
Sopen05g003760 Solanum pennellii HOM05D005738 ORTHO05D007135 2.4e-08 63.9 112 35.7
Solyc05g007910.3 Solanum lycopersicum HOM05D005738 ORTHO05D007135 3.2e-08 63.5 108 39.8
Oeu055111.1 Olea europaea HOM05D005738 ORTHO05D007135 4.2e-08 63.2 86 43.0
Actinidia31900 Actinidia chinensis HOM05D005738 ORTHO05D007135 5.4e-08 62.8 92 40.2
SEGI_26874 Sequoiadendron giganteum HOM05D005738 ORTHO05D007135 5.4e-08 62.8 66 47.0
Cfa008972 Carpinus fangiana HOM05D005738 ORTHO05D007135 7.1e-08 62.4 86 43.0
CAN.G1604.4 Capsicum annuum HOM05D005738 ORTHO05D007135 9.3e-08 62.0 100 46.0
CiPaw.05G134200 Carya illinoinensis HOM05D005738 ORTHO05D007135 9.3e-08 62.0 86 41.9
Cc00_g24810 Coffea canephora HOM05D005738 ORTHO05D007135 1.2e-07 61.6 86 43.0
Haze_12004 Corylus avellana HOM05D005738 ORTHO05D007135 1.2e-07 61.6 88 42.0
Nitab4.5_0000040g0260 Nicotiana tabacum HOM05D000556 ORTHO05D007135 1.2e-07 61.6 98 36.7
MSTRG.706 Avicennia marina HOM05D005738 ORTHO05D007135 1.6e-07 61.2 86 41.9
Nitab4.5_0001555g0030 Nicotiana tabacum HOM05D005738 ORTHO05D007135 2.1e-07 60.8 102 39.2
PRCOL_00000393 Prasinoderma coloniale HOM05D005495 ORTHO05D006878 2.1e-07 60.8 73 42.5
Thecc.02G344900 Theobroma cacao HOM05D005738 ORTHO05D007135 2.1e-07 60.8 100 40.0
Cc01_g00500 Coffea canephora HOM05D005738 ORTHO05D007135 2.7e-07 60.5 86 41.9
TWI31G0211 Tripterygium wilfordii HOM05D005738 ORTHO05D007135 2.7e-07 60.5 90 43.3
Gohir.A12G164500 Gossypium hirsutum HOM05D005738 ORTHO05D007135 3.5e-07 60.1 88 40.9
Gohir.D12G167600 Gossypium hirsutum HOM05D005738 ORTHO05D007135 3.5e-07 60.1 88 40.9
Gorai.008G180500 Gossypium raimondii HOM05D005738 ORTHO05D007135 3.5e-07 60.1 88 40.9
PGSC0003DMG400018425 Solanum tuberosum HOM05D005738 ORTHO05D007135 3.5e-07 60.1 105 35.2
CANSAT64G2506 Cannabis sativa HOM05D005738 ORTHO05D007135 4.6e-07 59.7 105 31.4
Cc00_g25960 Coffea canephora HOM05D005738 ORTHO05D007135 4.6e-07 59.7 86 43.0
DCAR_007157 Daucus carota HOM05D005738 ORTHO05D007135 4.6e-07 59.7 118 32.2
Duzib251G0762 Durio zibethinus HOM05D005738 ORTHO05D007135 4.6e-07 59.7 94 37.2
SalBow2G2920 Salvia bowleyana HOM05D005738 ORTHO05D007135 6.0e-07 59.3 128 33.6
CSS0032710 Camellia sinensis var. sinensis HOM05D005738 ORTHO05D007135 7.8e-07 58.9 105 34.3
QL03p068731 Quercus lobata HOM05D005738 ORTHO05D007135 1.0e-06 58.5 72 40.3
MBI05_g34363_MAGBIO Magnolia biondii HOM05D005738 ORTHO05D007135 1.3e-06 58.2 106 33.0
Atru.chr11.1777 Acer truncatum HOM05D005738 ORTHO05D007135 1.7e-06 57.8 85 41.2
arahy.Tifrunner.gnm1.ann1.M1YF1C Arachis hypogaea HOM05D005738 ORTHO05D007135 1.7e-06 57.8 68 45.6
Aqoxy3G03402 Aquilegia oxysepala HOM05D005738 ORTHO05D007135 2.3e-06 57.4 103 34.0
arahy.Tifrunner.gnm1.ann1.C6ZMY5 Arachis hypogaea HOM05D005738 ORTHO05D007135 2.3e-06 57.4 68 45.6
Haze_27388 Corylus avellana HOM05D005495 ORTHO05D006878 3.0e-06 57.0 73 42.5
HPP92_003355 Vanilla planifolia HOM05D005738 ORTHO05D007399 3.0e-06 57.0 92 38.0
AT3G17626 Arabidopsis thaliana HOM05D005495 ORTHO05D006878 3.9e-06 56.6 39 66.7
arahy.Tifrunner.gnm1.ann1.L6MMNY Arachis hypogaea HOM05D005738 ORTHO05D007135 5.1e-06 56.2 73 43.8
arahy.Tifrunner.gnm1.ann1.YAXL0T Arachis hypogaea HOM05D005738 ORTHO05D007135 5.1e-06 56.2 73 43.8
Ciclev10032918m.g Citrus clementina HOM05D005738 ORTHO05D007135 6.6e-06 55.8 86 39.5
FAN18G1300 Fragaria x ananassa HOM05D005738 ORTHO05D007135 6.6e-06 55.8 136 30.9
Prupe.1G275600 Prunus persica HOM05D005738 ORTHO05D007135 6.6e-06 55.8 74 40.5
FAN18G3749 Fragaria x ananassa HOM05D005738 ORTHO05D007135 8.7e-06 55.5 111 35.1
HanXRQChr09g0256931 Helianthus annuus HOM05D005738 ORTHO05D007135 8.7e-06 55.5 85 38.8
MD16G1072000 Malus domestica HOM05D005738 ORTHO05D007135 8.7e-06 55.5 92 34.8


User provided reference genes

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