Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu063146.1 Olea europaea HOM05D004415 ORTHO05D005198 1.5e-161 572.8 296 100.0
SalBow8G0313 Salvia bowleyana HOM05D004415 ORTHO05D005198 2.2e-136 489.2 293 84.0
SalBow8G4844 Salvia bowleyana HOM05D004415 ORTHO05D005198 2.2e-136 489.2 293 84.0
Migut.M01938 Erythranthe guttata HOM05D004415 ORTHO05D005198 2.1e-134 482.6 297 83.5
MSTRG.16315 Avicennia marina HOM05D004415 ORTHO05D005198 2.7e-134 482.3 297 82.8
vmacro03476 Vaccinium macrocarpon HOM05D004415 ORTHO05D005198 4.0e-133 478.4 296 82.8
MSTRG.7566 Avicennia marina HOM05D004415 ORTHO05D005198 5.2e-133 478.0 296 82.8
Dinv03287 Davidia involucrata HOM05D004415 ORTHO05D005198 7.5e-132 474.2 301 80.7
Hma1.2p1_0008F-2.1_g005810 Hydrangea macrophylla HOM05D004415 ORTHO05D005198 8.3e-131 470.7 298 80.9
Actinidia29247 Actinidia chinensis HOM05D004415 ORTHO05D005198 1.4e-130 469.9 296 81.1
SGA_v2.0_scaffold298G47634 Striga asiatica HOM05D004415 ORTHO05D005198 1.8e-130 469.5 297 80.1
Thecc.06G005600 Theobroma cacao HOM05D004415 ORTHO05D005198 2.4e-130 469.2 296 80.7
Rhsim13G0126400 Rhododendron simsii HOM05D004415 ORTHO05D005198 2.7e-129 465.7 296 80.7
GSVIVG01037942001 Vitis vinifera HOM05D004415 ORTHO05D005198 1.0e-128 463.8 294 81.0
Solyc02g069640.3 Solanum lycopersicum HOM05D004415 ORTHO05D005198 1.5e-127 459.9 294 79.9
Peaxi162Scf00195g00616 Petunia axillaris HOM05D004415 ORTHO05D005198 1.9e-127 459.5 294 78.9
Sopen02g018770 Solanum pennellii HOM05D004415 ORTHO05D005198 1.9e-127 459.5 294 79.6
PGSC0003DMG400021134 Solanum tuberosum HOM05D004415 ORTHO05D005198 2.5e-127 459.1 294 79.3
Ciclev10016110m.g Citrus clementina HOM05D004415 ORTHO05D005198 5.6e-127 458.0 297 79.8
Duzib235G0717 Durio zibethinus HOM05D004415 ORTHO05D005198 5.6e-127 458.0 297 78.8
Phvul.009G218500 Phaseolus vulgaris HOM05D004415 ORTHO05D005198 5.6e-127 458.0 298 77.5
Lalb_Chr11g0073471 Lupinus albus HOM05D004415 ORTHO05D005198 9.5e-127 457.2 297 79.1
Potri.001G440600 Populus trichocarpa HOM05D004415 ORTHO05D005198 1.2e-126 456.8 297 79.1
Nitab4.5_0007613g0030 Nicotiana tabacum HOM05D004415 ORTHO05D005198 1.6e-126 456.4 294 79.6
Lj1A1155G52 Lonicera japonica HOM05D004415 ORTHO05D005198 2.1e-126 456.1 296 79.7
PGR083G0443 Punica granatum HOM05D004415 ORTHO05D005198 2.1e-126 456.1 298 77.9
Ca_02386_v3 Cicer arietinum L. HOM05D004415 ORTHO05D005198 2.8e-126 455.7 297 78.8
Nitab4.5_0010415g0030 Nicotiana tabacum HOM05D004415 ORTHO05D005198 3.6e-126 455.3 294 79.6
unitig_37.g12064 Utricularia gibba HOM05D004415 ORTHO05D005198 4.7e-126 454.9 297 79.1
arahy.Tifrunner.gnm1.ann1.ZSFV9B Arachis hypogaea HOM05D004415 ORTHO05D005198 6.1e-126 454.5 297 78.5
CANSAT35G0835 Cannabis sativa HOM05D004415 ORTHO05D005198 1.8e-125 453.0 295 78.0
TWI38G1449 Tripterygium wilfordii HOM05D004415 ORTHO05D005198 1.8e-125 453.0 297 78.5
Potri.011G155200 Populus trichocarpa HOM05D004415 ORTHO05D005198 4.0e-125 451.8 297 78.8
Sabra16G0298000 Salix brachista HOM05D004415 ORTHO05D005198 4.0e-125 451.8 305 77.7
arahy.Tifrunner.gnm1.ann1.UW0JAL Arachis hypogaea HOM05D004415 ORTHO05D005198 5.2e-125 451.4 297 78.5
CSS0002194 Camellia sinensis var. sinensis HOM05D004415 ORTHO05D005198 6.8e-125 451.1 297 77.4
Atru.chr10.660 Acer truncatum HOM05D004415 ORTHO05D005198 1.2e-124 450.3 296 77.4
TAR627G0414 Trochodendron aralioides HOM05D004415 ORTHO05D005198 1.2e-124 450.3 298 75.8
TAR627G1150 Trochodendron aralioides HOM05D004415 ORTHO05D005198 1.2e-124 450.3 298 75.8
Cfa000755 Carpinus fangiana HOM05D004415 ORTHO05D005198 1.5e-124 449.9 297 79.1
CiPaw.09G149000 Carya illinoinensis HOM05D004415 ORTHO05D005198 5.7e-124 448.0 296 77.0
Sabra16G0300000 Salix brachista HOM05D004415 ORTHO05D005198 5.7e-124 448.0 305 77.0
CDE03G0179 Ceratophyllum demersum HOM05D004415 ORTHO05D005198 9.8e-124 447.2 297 76.1
Gohir.A06G202400 Gossypium hirsutum HOM05D004415 ORTHO05D005198 9.8e-124 447.2 297 76.4
Gorai.010G247000 Gossypium raimondii HOM05D004415 ORTHO05D005198 9.8e-124 447.2 297 76.8
Manes.16G062800 Manihot esculenta HOM05D004415 ORTHO05D005198 1.3e-123 446.8 296 76.4
COL.COLO4_22898 Corchorus olitorius HOM05D004415 ORTHO05D005198 1.7e-123 446.4 298 78.2
FvH4_3g11520 Fragaria vesca HOM05D004415 ORTHO05D005198 2.2e-123 446.0 297 75.8
CSS0048897 Camellia sinensis var. sinensis HOM05D004415 ORTHO05D005198 2.9e-123 445.7 297 76.1
Lalb_Chr08g0233111 Lupinus albus HOM05D004415 ORTHO05D005198 2.9e-123 445.7 297 75.1
Nn7g37839 Nelumbo nucifera HOM05D004415 ORTHO05D005198 4.9e-123 444.9 297 74.1
VMungo1309G0873 Vigna mungo HOM05D004415 ORTHO05D005198 8.3e-123 444.1 296 76.0
CDE06G2804 Ceratophyllum demersum HOM05D004415 ORTHO05D005198 4.1e-122 441.8 297 75.1
CsaV3_1G037760 Cucumis sativus L. HOM05D004415 ORTHO05D005198 5.4e-122 441.4 297 77.8
Cpa.g.sc173.46 Carica papaya HOM05D004415 ORTHO05D005198 7.0e-122 441.0 294 77.6
Medtr2g047110 Medicago truncatula HOM05D004415 ORTHO05D005198 7.0e-122 441.0 297 76.4
Sc17g0004090 Simmondsia chinensis HOM05D004415 ORTHO05D005198 7.0e-122 441.0 297 76.8
RcHm_v2.0_Chr5g0018471 Rosa chinensis HOM05D004415 ORTHO05D005198 9.2e-122 440.7 297 74.7
ClCG01G008890 Citrullus lanatus HOM05D004415 ORTHO05D005198 1.2e-121 440.3 297 77.4
CSS0010489 Camellia sinensis var. sinensis HOM05D004415 ORTHO05D005198 4.6e-121 438.3 282 78.4
MD00G1097300 Malus domestica HOM05D004415 ORTHO05D005198 5.9e-121 438.0 297 74.4
Sed0021762 Sechium edule HOM05D004415 ORTHO05D005198 5.9e-121 438.0 298 77.2
Glyma.15G191200 Glycine max HOM05D004415 ORTHO05D005198 1.0e-120 437.2 297 74.7
FAN21G2450 Fragaria x ananassa HOM05D004415 ORTHO05D005198 3.0e-120 435.6 315 72.1
FAN16G2189 Fragaria x ananassa HOM05D004415 ORTHO05D005198 2.5e-119 432.6 315 71.1
Ah.01g002800 Amaranthus hybridus HOM05D004415 ORTHO05D005198 3.3e-119 432.2 295 74.6
Prupe.4G102500 Prunus persica HOM05D004415 ORTHO05D005198 3.3e-119 432.2 296 75.3
Ca_17811_v3 Cicer arietinum L. HOM05D004415 ORTHO05D005198 5.6e-119 431.4 299 73.2
FAN25G0769 Fragaria x ananassa HOM05D004415 ORTHO05D005198 5.6e-119 431.4 314 70.1
Glyma.09G083100 Glycine max HOM05D004415 ORTHO05D005198 1.2e-118 430.3 296 74.7
Psat1g018760 Pisum sativum HOM05D004415 ORTHO05D005198 1.6e-118 429.9 297 75.1
CAN.G954.7 Capsicum annuum HOM05D004415 ORTHO05D005198 3.6e-118 428.7 281 77.9
Thhalv10025893m.g Eutrema salsugineum HOM05D004415 ORTHO05D005198 3.6e-118 428.7 294 73.8
Hund01093 Selenicereus undatus HOM05D004415 ORTHO05D005198 3.6e-118 428.7 297 74.7
CARHR227240 Cardamine hirsuta HOM05D004415 ORTHO05D005198 4.7e-118 428.3 294 73.1
AT4G20410 Arabidopsis thaliana HOM05D004415 ORTHO05D005198 6.2e-118 427.9 294 72.4
AL7G33480 Arabidopsis lyrata HOM05D004415 ORTHO05D005198 8.0e-118 427.6 294 72.8
QL05p063115 Quercus lobata HOM05D004415 ORTHO05D005198 1.4e-117 426.8 341 67.4
Carub.0007s2075 Capsella rubella HOM05D004415 ORTHO05D005198 1.8e-117 426.4 294 72.4
TPR.G22904 Trifolium pratense HOM05D004415 ORTHO05D005198 1.8e-117 426.4 292 74.7
TPR.G6264 Trifolium pratense HOM05D004415 ORTHO05D005198 4.0e-117 425.2 298 72.5
HPP92_013188 Vanilla planifolia HOM05D004415 ORTHO05D005198 4.0e-117 425.2 296 73.6
ATR1098G142 Amborella trichopoda HOM05D004415 ORTHO05D005198 6.8e-117 424.5 295 71.5
Medtr8g089250 Medicago truncatula HOM05D004415 ORTHO05D005198 6.8e-117 424.5 297 72.1
Sp7g18770 Schrenkiella parvula HOM05D004415 ORTHO05D005198 6.8e-117 424.5 294 72.4
Aqoxy4G00050 Aquilegia oxysepala HOM05D004415 ORTHO05D005198 1.5e-116 423.3 292 73.3
THA.LOC104812930 Tarenaya hassleriana HOM05D004415 ORTHO05D005198 2.6e-116 422.5 293 71.3
A01p12100 Brassica napus HOM05D004415 ORTHO05D005198 9.8e-116 420.6 294 72.1
C01p14410 Brassica napus HOM05D004415 ORTHO05D005198 9.8e-116 420.6 294 72.1
BolC1t01398H Brassica oleracea HOM05D004415 ORTHO05D005198 9.8e-116 420.6 294 72.1
arahy.Tifrunner.gnm1.ann1.5MZ6ZS Arachis hypogaea HOM05D004415 ORTHO05D005198 3.7e-115 418.7 297 72.1
Sabra11G0144600 Salix brachista HOM05D004415 ORTHO05D005198 6.4e-115 417.9 295 73.9
BraA01t01153Z Brassica rapa HOM05D004415 ORTHO05D005198 1.4e-114 416.8 294 71.8
AUR62025006 Chenopodium quinoa HOM05D004415 ORTHO05D005198 2.4e-114 416.0 297 72.7
arahy.Tifrunner.gnm1.ann1.Z0R64B Arachis hypogaea HOM05D004415 ORTHO05D005198 3.2e-114 415.6 297 71.7
Os04g0618500 Oryza sativa ssp. japonica HOM05D004415 ORTHO05D005198 3.2e-114 415.6 296 71.3
ECA236G1935 Erigeron canadensis HOM05D004415 ORTHO05D005198 1.6e-113 413.3 296 70.6
Eucgr.D01029 Eucalyptus grandis HOM05D004415 ORTHO05D005198 2.0e-113 412.9 269 78.8
AUR62006530 Chenopodium quinoa HOM05D004415 ORTHO05D005198 1.3e-112 410.2 297 71.4
Lalb_Chr07g0185681 Lupinus albus HOM05D004415 ORTHO05D005198 2.3e-112 409.5 282 72.7
PSO675G6508 Papaver somniferum HOM05D004415 ORTHO05D005198 3.9e-112 408.7 298 71.5
Gorai.009G116300 Gossypium raimondii HOM05D004415 ORTHO05D005198 6.6e-112 407.9 295 71.2
PSO541G2694 Papaver somniferum HOM05D004415 ORTHO05D005198 6.6e-112 407.9 298 70.5
Sed0009944 Sechium edule HOM05D004415 ORTHO05D005198 6.6e-112 407.9 277 76.9
Aa31LG6G2800 Aethionema arabicum HOM05D004415 ORTHO05D005198 2.5e-111 406.0 294 71.1
EL10Ac9g22486 Beta vulgaris HOM05D004415 ORTHO05D005198 7.3e-111 404.4 294 71.4
Gohir.D06G219300 Gossypium hirsutum HOM05D004415 ORTHO05D005198 5.8e-108 394.8 249 79.1
Lsat_1_v5_gn_7_31101 Lactuca sativa HOM05D004415 ORTHO05D005198 2.7e-105 386.0 296 67.9
Gohir.D05G112100 Gossypium hirsutum HOM05D004415 ORTHO05D005198 1.4e-98 363.6 320 61.9
Hma1.2p1_0008F-2.1_g005800 Hydrangea macrophylla HOM05D004415 ORTHO05D005198 4.1e-98 362.1 219 83.1
Haze_05963 Corylus avellana HOM05D004415 ORTHO05D005198 1.3e-96 357.1 297 66.3
Lj6g0004921 Lotus japonicus HOM05D004415 ORTHO05D005198 5.2e-93 345.1 296 62.5
Cc09_g04060 Coffea canephora HOM05D004415 ORTHO05D005198 3.4e-92 342.4 222 77.9
AagrBONN_evm.TU.Sc2ySwM_368.1346 Anthoceros agrestis HOM05D004415 ORTHO05D005198 1.3e-88 330.5 290 57.2
Zm00001eb431060 Zea mays HOM05D004415 ORTHO05D005198 5.1e-88 328.6 215 75.8
arahy.Tifrunner.gnm1.ann1.QWIY8B Arachis hypogaea HOM05D004415 ORTHO05D005198 4.0e-85 318.9 279 61.6
MELO3C021810.2 Cucumis melo HOM05D004415 ORTHO05D005198 6.9e-85 318.2 223 75.3
HanXRQChr04g0119541 Helianthus annuus HOM05D004415 ORTHO05D005198 2.0e-84 316.6 222 72.5
AagrBONN_evm.TU.Sc2ySwM_362.579 Anthoceros agrestis HOM05D004415 ORTHO05D005198 5.8e-84 315.1 293 56.3
Mapoly0008s0129 Marchantia polymorpha HOM05D004415 ORTHO05D005198 1.7e-83 313.5 293 55.3
AagrBONN_evm.TU.Sc2ySwM_368.3355 Anthoceros agrestis HOM05D004415 ORTHO05D005198 8.4e-83 311.2 293 55.6
Pp3c19_23300 Physcomitrium patens HOM05D004415 ORTHO05D005198 1.6e-81 307.0 289 56.4
CDE03G0221 Ceratophyllum demersum HOM05D004415 ORTHO05D005198 2.7e-81 306.2 272 61.4
CBR_g24190 Chara braunii HOM05D004415 ORTHO05D005198 1.3e-80 303.9 295 55.6
SMO228G0081 Selaginella moellendorffii HOM05D004415 ORTHO05D005198 1.5e-79 300.4 262 56.1
Zm00001eb410240 Zea mays HOM05D004415 ORTHO05D005198 1.6e-78 297.0 220 69.1
Duzib043G0003 Durio zibethinus HOM05D004415 ORTHO05D005198 4.0e-69 265.8 176 77.3
CBR_g48904 Chara braunii HOM05D004415 ORTHO05D005198 9.0e-69 264.6 256 53.9
arahy.Tifrunner.gnm1.ann1.09GK0V Arachis hypogaea HOM05D004415 ORTHO05D005198 2.6e-68 263.1 252 58.3
arahy.Tifrunner.gnm1.ann1.6K3MVX Arachis hypogaea HOM05D004415 ORTHO05D005198 9.0e-61 238.0 177 69.5
MBI02_g43828_MAGBIO Magnolia biondii HOM05D004415 ORTHO05D005198 7.6e-60 235.0 150 79.3
Oeu063144.1 Olea europaea HOM05D004415 ORTHO05D005198 2.5e-58 229.9 181 71.8
Gohir.A05G111501 Gossypium hirsutum HOM05D004415 ORTHO05D005198 5.1e-56 222.2 215 59.1
SEGI_29507 Sequoiadendron giganteum HOM05D004415 ORTHO05D005198 2.2e-54 216.9 162 64.2
Zm00001eb072080 Zea mays HOM05D004415 ORTHO05D005198 5.9e-52 208.8 143 69.2
arahy.Tifrunner.gnm1.ann1.W2C20P Arachis hypogaea HOM05D004415 ORTHO05D005198 8.5e-51 204.9 149 69.1
TAR627G0753 Trochodendron aralioides HOM05D004415 ORTHO05D005198 1.4e-48 197.6 135 70.4
arahy.Tifrunner.gnm1.ann1.NJ63RV Arachis hypogaea HOM05D004415 ORTHO05D005198 2.1e-41 173.7 138 65.9
MCO11G422 Micromonas commoda HOM05D004415 ORTHO05D005198 1.0e-40 171.4 266 36.1
PRCOL_00005341 Prasinoderma coloniale HOM05D004415 ORTHO05D005198 6.3e-38 162.2 308 36.0
VMungo0464G1344 Vigna mungo HOM05D004415 ORTHO05D005198 2.9e-35 153.3 105 72.4
arahy.Tifrunner.gnm1.ann1.YAAB6X Arachis hypogaea HOM05D004415 ORTHO05D005198 2.6e-31 140.2 132 60.6
Zm00001eb266710 Zea mays HOM05D004415 ORTHO05D005198 2.8e-30 136.7 105 63.8
SEGI_22365 Sequoiadendron giganteum HOM05D004415 ORTHO05D005198 3.7e-30 136.3 106 66.0
Cre08.g385700 Chlamydomonas reinhardtii HOM05D004415 ORTHO05D005198 3.6e-25 119.8 267 31.5
Cc09_g04070 Coffea canephora HOM05D004415 ORTHO05D005198 2.0e-23 114.0 65 87.7
arahy.Tifrunner.gnm1.ann1.479FYN Arachis hypogaea HOM05D004415 ORTHO05D005198 6.3e-22 109.0 116 56.0
FvH4_3g11480 Fragaria vesca HOM05D004415 ORTHO05D005198 4.5e-20 102.8 81 67.9
SGA_v2.0_scaffold298G47629 Striga asiatica HOM05D004415 ORTHO05D005198 5.9e-20 102.4 128 50.0
arahy.Tifrunner.gnm1.ann1.LII2ER Arachis hypogaea HOM05D004415 ORTHO05D005198 6.8e-16 89.0 114 48.2
arahy.Tifrunner.gnm1.ann1.8SCZ96 Arachis hypogaea HOM05D004415 ORTHO05D005198 1.3e-14 84.7 115 46.1
BcaB03g15995 Brassica carinata HOM05D004415 ORTHO05D005198 6.3e-14 82.4 91 52.7
VMungo0331G0484 Vigna mungo HOM05D003730 ORTHO05D005198 8.0e-09 65.5 45 71.1
HanXRQChr04g0119531 Helianthus annuus HOM05D004415 ORTHO05D005198 1.0e-08 65.1 52 67.3
GSVIVG01005645001 Vitis vinifera HOM05D004415 ORTHO05D005198 1.3e-06 58.2 53 56.6
GSVIVG01032305001 Vitis vinifera HOM05D004415 ORTHO05D005198 1.3e-06 58.2 53 56.6
GSVIVG01003362001 Vitis vinifera HOM05D004415 ORTHO05D005198 1.7e-06 57.8 53 56.6
SGA_v2.0_scaffold298G47630 Striga asiatica HOM05D004415 ORTHO05D005198 8.3e-06 55.5 71 45.1


User provided reference genes

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