Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu063144.1 Olea europaea HOM05D004415 ORTHO05D005198 2.5e-101 372.1 183 100.0
Oeu063146.1 Olea europaea HOM05D004415 ORTHO05D005198 5.2e-59 231.5 181 71.8
SalBow8G0313 Salvia bowleyana HOM05D004415 ORTHO05D005198 2.4e-51 206.1 181 62.4
SalBow8G4844 Salvia bowleyana HOM05D004415 ORTHO05D005198 2.4e-51 206.1 181 62.4
Migut.M01938 Erythranthe guttata HOM05D004415 ORTHO05D005198 3.2e-48 195.7 182 61.0
MSTRG.16315 Avicennia marina HOM05D004415 ORTHO05D005198 7.1e-48 194.5 182 59.9
Dinv03287 Davidia involucrata HOM05D004415 ORTHO05D005198 3.5e-47 192.2 181 59.1
SGA_v2.0_scaffold298G47634 Striga asiatica HOM05D004415 ORTHO05D005198 6.0e-47 191.4 182 58.8
Thecc.06G005600 Theobroma cacao HOM05D004415 ORTHO05D005198 1.9e-45 186.4 181 58.0
vmacro03476 Vaccinium macrocarpon HOM05D004415 ORTHO05D005198 4.3e-45 185.3 181 58.6
unitig_37.g12064 Utricularia gibba HOM05D004415 ORTHO05D005198 7.3e-45 184.5 182 58.2
Duzib235G0717 Durio zibethinus HOM05D004415 ORTHO05D005198 9.6e-45 184.1 182 58.2
QL05p063115 Quercus lobata HOM05D004415 ORTHO05D005198 2.1e-44 183.0 191 55.5
Solyc02g069640.3 Solanum lycopersicum HOM05D004415 ORTHO05D005198 2.1e-44 183.0 182 57.1
MSTRG.7566 Avicennia marina HOM05D004415 ORTHO05D005198 2.8e-44 182.6 181 58.0
Potri.001G440600 Populus trichocarpa HOM05D004415 ORTHO05D005198 2.8e-44 182.6 182 57.1
Sopen02g018770 Solanum pennellii HOM05D004415 ORTHO05D005198 2.8e-44 182.6 182 56.6
PGSC0003DMG400021134 Solanum tuberosum HOM05D004415 ORTHO05D005198 2.8e-44 182.6 182 56.6
Potri.011G155200 Populus trichocarpa HOM05D004415 ORTHO05D005198 3.6e-44 182.2 182 57.1
Sabra16G0298000 Salix brachista HOM05D004415 ORTHO05D005198 3.6e-44 182.2 182 56.6
Hma1.2p1_0008F-2.1_g005810 Hydrangea macrophylla HOM05D004415 ORTHO05D005198 8.1e-44 181.0 183 56.3
Lj1A1155G52 Lonicera japonica HOM05D004415 ORTHO05D005198 8.1e-44 181.0 181 56.9
Nitab4.5_0007613g0030 Nicotiana tabacum HOM05D004415 ORTHO05D005198 8.1e-44 181.0 185 57.3
Nitab4.5_0010415g0030 Nicotiana tabacum HOM05D004415 ORTHO05D005198 8.1e-44 181.0 185 57.3
Cc09_g04060 Coffea canephora HOM05D004415 ORTHO05D005198 1.1e-43 180.6 181 56.9
Peaxi162Scf00195g00616 Petunia axillaris HOM05D004415 ORTHO05D005198 1.4e-43 180.3 182 56.6
Sabra16G0300000 Salix brachista HOM05D004415 ORTHO05D005198 1.4e-43 180.3 182 56.0
Ciclev10016110m.g Citrus clementina HOM05D004415 ORTHO05D005198 3.1e-43 179.1 182 57.1
CSS0048897 Camellia sinensis var. sinensis HOM05D004415 ORTHO05D005198 4.0e-43 178.7 182 54.9
Glyma.15G191200 Glycine max HOM05D004415 ORTHO05D005198 5.2e-43 178.3 182 53.8
Actinidia29247 Actinidia chinensis HOM05D004415 ORTHO05D005198 9.0e-43 177.6 181 55.8
Rhsim13G0126400 Rhododendron simsii HOM05D004415 ORTHO05D005198 9.0e-43 177.6 181 55.8
CSS0002194 Camellia sinensis var. sinensis HOM05D004415 ORTHO05D005198 1.2e-42 177.2 182 54.9
CSS0010489 Camellia sinensis var. sinensis HOM05D004415 ORTHO05D005198 1.2e-42 177.2 182 54.9
CAN.G954.7 Capsicum annuum HOM05D004415 ORTHO05D005198 1.2e-42 177.2 182 56.0
Nn7g37839 Nelumbo nucifera HOM05D004415 ORTHO05D005198 1.5e-42 176.8 182 53.3
Phvul.009G218500 Phaseolus vulgaris HOM05D004415 ORTHO05D005198 1.5e-42 176.8 183 54.6
GSVIVG01037942001 Vitis vinifera HOM05D004415 ORTHO05D005198 1.5e-42 176.8 182 54.9
Lalb_Chr11g0073471 Lupinus albus HOM05D004415 ORTHO05D005198 2.0e-42 176.4 182 55.5
Glyma.09G083100 Glycine max HOM05D004415 ORTHO05D005198 4.4e-42 175.3 181 54.7
TWI38G1449 Tripterygium wilfordii HOM05D004415 ORTHO05D005198 7.6e-42 174.5 182 54.4
CiPaw.09G149000 Carya illinoinensis HOM05D004415 ORTHO05D005198 1.3e-41 173.7 181 53.6
Haze_05963 Corylus avellana HOM05D004415 ORTHO05D005198 1.3e-41 173.7 182 54.9
Gohir.A06G202400 Gossypium hirsutum HOM05D004415 ORTHO05D005198 1.7e-41 173.3 182 55.5
Gorai.010G247000 Gossypium raimondii HOM05D004415 ORTHO05D005198 1.7e-41 173.3 182 55.5
Atru.chr10.660 Acer truncatum HOM05D004415 ORTHO05D005198 2.2e-41 172.9 181 54.1
Cfa000755 Carpinus fangiana HOM05D004415 ORTHO05D005198 2.2e-41 172.9 182 54.9
Lj6g0004921 Lotus japonicus HOM05D004415 ORTHO05D005198 2.2e-41 172.9 181 53.0
TAR627G0414 Trochodendron aralioides HOM05D004415 ORTHO05D005198 2.2e-41 172.9 183 51.9
TAR627G0753 Trochodendron aralioides HOM05D004415 ORTHO05D005198 2.2e-41 172.9 183 51.9
TAR627G1150 Trochodendron aralioides HOM05D004415 ORTHO05D005198 2.2e-41 172.9 183 51.9
MELO3C021810.2 Cucumis melo HOM05D004415 ORTHO05D005198 3.8e-41 172.2 182 56.0
Duzib043G0003 Durio zibethinus HOM05D004415 ORTHO05D005198 3.8e-41 172.2 181 55.8
FAN21G2450 Fragaria x ananassa HOM05D004415 ORTHO05D005198 4.9e-41 171.8 182 53.8
Manes.16G062800 Manihot esculenta HOM05D004415 ORTHO05D005198 4.9e-41 171.8 181 53.6
CsaV3_1G037760 Cucumis sativus L. HOM05D004415 ORTHO05D005198 6.4e-41 171.4 182 56.0
FvH4_3g11520 Fragaria vesca HOM05D004415 ORTHO05D005198 6.4e-41 171.4 182 53.3
FAN16G2189 Fragaria x ananassa HOM05D004415 ORTHO05D005198 6.4e-41 171.4 182 53.3
Lalb_Chr08g0233111 Lupinus albus HOM05D004415 ORTHO05D005198 8.4e-41 171.0 182 52.2
PGR083G0443 Punica granatum HOM05D004415 ORTHO05D005198 8.4e-41 171.0 183 53.0
Aqoxy4G00050 Aquilegia oxysepala HOM05D004415 ORTHO05D005198 1.1e-40 170.6 181 53.0
PSO675G6508 Papaver somniferum HOM05D004415 ORTHO05D005198 1.4e-40 170.2 183 55.7
RcHm_v2.0_Chr5g0018471 Rosa chinensis HOM05D004415 ORTHO05D005198 1.9e-40 169.9 182 52.7
CANSAT35G0835 Cannabis sativa HOM05D004415 ORTHO05D005198 2.4e-40 169.5 183 53.6
COL.COLO4_22898 Corchorus olitorius HOM05D004415 ORTHO05D005198 2.4e-40 169.5 183 55.7
PSO541G2694 Papaver somniferum HOM05D004415 ORTHO05D005198 2.4e-40 169.5 183 54.1
VMungo1309G0873 Vigna mungo HOM05D004415 ORTHO05D005198 3.2e-40 169.1 181 53.0
FAN25G0769 Fragaria x ananassa HOM05D004415 ORTHO05D005198 4.2e-40 168.7 181 51.4
CARHR227240 Cardamine hirsuta HOM05D004415 ORTHO05D005198 5.4e-40 168.3 181 53.6
ClCG01G008890 Citrullus lanatus HOM05D004415 ORTHO05D005198 5.4e-40 168.3 182 54.4
AT4G20410 Arabidopsis thaliana HOM05D004415 ORTHO05D005198 7.1e-40 167.9 181 52.5
arahy.Tifrunner.gnm1.ann1.ZSFV9B Arachis hypogaea HOM05D004415 ORTHO05D005198 7.1e-40 167.9 182 53.3
Lsat_1_v5_gn_7_31101 Lactuca sativa HOM05D004415 ORTHO05D005198 7.1e-40 167.9 181 51.4
AL7G33480 Arabidopsis lyrata HOM05D004415 ORTHO05D005198 9.3e-40 167.5 181 53.0
Thhalv10025893m.g Eutrema salsugineum HOM05D004415 ORTHO05D005198 1.2e-39 167.2 181 53.6
Carub.0007s2075 Capsella rubella HOM05D004415 ORTHO05D005198 1.6e-39 166.8 181 52.5
Ca_02386_v3 Cicer arietinum L. HOM05D004415 ORTHO05D005198 1.6e-39 166.8 182 53.3
ECA236G1935 Erigeron canadensis HOM05D004415 ORTHO05D005198 1.6e-39 166.8 183 50.8
Sed0009944 Sechium edule HOM05D004415 ORTHO05D005198 2.1e-39 166.4 182 53.8
CDE03G0179 Ceratophyllum demersum HOM05D004415 ORTHO05D005198 2.7e-39 166.0 182 52.2
Lalb_Chr07g0185681 Lupinus albus HOM05D004415 ORTHO05D005198 2.7e-39 166.0 182 50.5
Medtr2g047110 Medicago truncatula HOM05D004415 ORTHO05D005198 2.7e-39 166.0 182 53.3
A01p12100 Brassica napus HOM05D004415 ORTHO05D005198 3.5e-39 165.6 181 53.0
BraA01t01153Z Brassica rapa HOM05D004415 ORTHO05D005198 3.5e-39 165.6 181 53.0
Sp7g18770 Schrenkiella parvula HOM05D004415 ORTHO05D005198 3.5e-39 165.6 181 52.5
Psat1g018760 Pisum sativum HOM05D004415 ORTHO05D005198 4.6e-39 165.2 182 53.3
Sed0021762 Sechium edule HOM05D004415 ORTHO05D005198 4.6e-39 165.2 183 53.0
Medtr8g089250 Medicago truncatula HOM05D004415 ORTHO05D005198 6.0e-39 164.9 182 51.6
C01p14410 Brassica napus HOM05D004415 ORTHO05D005198 1.0e-38 164.1 181 52.5
BolC1t01398H Brassica oleracea HOM05D004415 ORTHO05D005198 1.0e-38 164.1 181 52.5
ATR1098G142 Amborella trichopoda HOM05D004415 ORTHO05D005198 3.0e-38 162.5 181 50.3
Gorai.009G116300 Gossypium raimondii HOM05D004415 ORTHO05D005198 3.0e-38 162.5 180 52.2
HanXRQChr04g0119541 Helianthus annuus HOM05D004415 ORTHO05D005198 3.9e-38 162.2 181 50.3
Ca_17811_v3 Cicer arietinum L. HOM05D004415 ORTHO05D005198 5.1e-38 161.8 184 50.5
arahy.Tifrunner.gnm1.ann1.UW0JAL Arachis hypogaea HOM05D004415 ORTHO05D005198 6.6e-38 161.4 182 52.2
THA.LOC104812930 Tarenaya hassleriana HOM05D004415 ORTHO05D005198 8.7e-38 161.0 181 49.7
TPR.G6264 Trifolium pratense HOM05D004415 ORTHO05D005198 8.7e-38 161.0 184 50.0
Cpa.g.sc173.46 Carica papaya HOM05D004415 ORTHO05D005198 1.5e-37 160.2 181 53.0
Sc17g0004090 Simmondsia chinensis HOM05D004415 ORTHO05D005198 1.5e-37 160.2 182 52.2
Sabra11G0144600 Salix brachista HOM05D004415 ORTHO05D005198 1.9e-37 159.8 180 52.2
CDE06G2804 Ceratophyllum demersum HOM05D004415 ORTHO05D005198 3.3e-37 159.1 182 50.0
MD00G1097300 Malus domestica HOM05D004415 ORTHO05D005198 4.3e-37 158.7 182 49.5
HPP92_013188 Vanilla planifolia HOM05D004415 ORTHO05D005198 7.3e-37 157.9 181 50.3
arahy.Tifrunner.gnm1.ann1.5MZ6ZS Arachis hypogaea HOM05D004415 ORTHO05D005198 2.1e-36 156.4 182 49.5
Aa31LG6G2800 Aethionema arabicum HOM05D004415 ORTHO05D005198 4.8e-36 155.2 181 50.8
TPR.G22904 Trifolium pratense HOM05D004415 ORTHO05D005198 4.8e-36 155.2 177 50.8
Ah.01g002800 Amaranthus hybridus HOM05D004415 ORTHO05D005198 8.1e-36 154.5 180 50.0
arahy.Tifrunner.gnm1.ann1.W2C20P Arachis hypogaea HOM05D004415 ORTHO05D005198 1.4e-35 153.7 182 48.4
arahy.Tifrunner.gnm1.ann1.Z0R64B Arachis hypogaea HOM05D004415 ORTHO05D005198 1.8e-35 153.3 182 48.9
Prupe.4G102500 Prunus persica HOM05D004415 ORTHO05D005198 1.8e-35 153.3 181 50.8
Os04g0618500 Oryza sativa ssp. japonica HOM05D004415 ORTHO05D005198 2.4e-35 152.9 182 48.4
Hund01093 Selenicereus undatus HOM05D004415 ORTHO05D005198 3.1e-35 152.5 182 50.0
arahy.Tifrunner.gnm1.ann1.6K3MVX Arachis hypogaea HOM05D004415 ORTHO05D005198 4.0e-35 152.1 182 48.4
arahy.Tifrunner.gnm1.ann1.QWIY8B Arachis hypogaea HOM05D004415 ORTHO05D005198 4.0e-35 152.1 182 47.3
AUR62025006 Chenopodium quinoa HOM05D004415 ORTHO05D005198 1.5e-34 150.2 182 48.4
AUR62006530 Chenopodium quinoa HOM05D004415 ORTHO05D005198 2.0e-34 149.8 182 47.8
Gohir.D05G112100 Gossypium hirsutum HOM05D004415 ORTHO05D005198 2.2e-33 146.4 205 45.9
EL10Ac9g22486 Beta vulgaris HOM05D004415 ORTHO05D005198 4.9e-33 145.2 179 48.0
Zm00001eb072080 Zea mays HOM05D004415 ORTHO05D005198 1.3e-30 137.1 160 47.5
Gohir.A05G111501 Gossypium hirsutum HOM05D004415 ORTHO05D005198 3.9e-30 135.6 182 46.7
VMungo0464G1344 Vigna mungo HOM05D004415 ORTHO05D005198 1.6e-28 130.2 156 48.7
AagrBONN_evm.TU.Sc2ySwM_368.1346 Anthoceros agrestis HOM05D004415 ORTHO05D005198 2.0e-26 123.2 178 41.6
CDE03G0221 Ceratophyllum demersum HOM05D004415 ORTHO05D005198 2.0e-26 123.2 147 47.6
Eucgr.D01029 Eucalyptus grandis HOM05D004415 ORTHO05D005198 3.4e-26 122.5 154 47.4
Gohir.D06G219300 Gossypium hirsutum HOM05D004415 ORTHO05D005198 2.9e-25 119.4 134 51.5
AagrBONN_evm.TU.Sc2ySwM_362.579 Anthoceros agrestis HOM05D004415 ORTHO05D005198 5.5e-24 115.2 182 41.2
arahy.Tifrunner.gnm1.ann1.09GK0V Arachis hypogaea HOM05D004415 ORTHO05D005198 5.5e-24 115.2 148 43.9
Pp3c19_23300 Physcomitrium patens HOM05D004415 ORTHO05D005198 7.1e-24 114.8 182 39.6
SEGI_22365 Sequoiadendron giganteum HOM05D004415 ORTHO05D005198 2.1e-23 113.2 157 44.6
Zm00001eb266710 Zea mays HOM05D004415 ORTHO05D005198 2.7e-23 112.8 153 43.8
AagrBONN_evm.TU.Sc2ySwM_368.3355 Anthoceros agrestis HOM05D004415 ORTHO05D005198 6.0e-23 111.7 182 40.1
CBR_g48904 Chara braunii HOM05D004415 ORTHO05D005198 1.8e-22 110.2 184 38.0
Zm00001eb410240 Zea mays HOM05D004415 ORTHO05D005198 3.0e-22 109.4 149 43.6
Mapoly0008s0129 Marchantia polymorpha HOM05D004415 ORTHO05D005198 2.8e-20 102.8 182 37.4
FvH4_3g11480 Fragaria vesca HOM05D004415 ORTHO05D005198 6.2e-20 101.7 78 69.2
CBR_g24190 Chara braunii HOM05D004415 ORTHO05D005198 8.2e-20 101.3 182 38.5
Hma1.2p1_0008F-2.1_g005800 Hydrangea macrophylla HOM05D004415 ORTHO05D005198 1.2e-18 97.4 60 78.3
Zm00001eb431060 Zea mays HOM05D004415 ORTHO05D005198 5.5e-16 88.6 61 68.9
SMO228G0081 Selaginella moellendorffii HOM05D004415 ORTHO05D005198 6.0e-15 85.1 150 34.0
PRCOL_00005341 Prasinoderma coloniale HOM05D004415 ORTHO05D005198 1.6e-12 77.0 190 31.1


User provided reference genes

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