Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu063091.1 Olea europaea HOM05D007404 ORTHO05D009281 3.2e-167 591.7 298 100.0
MSTRG.19336 Avicennia marina HOM05D007404 ORTHO05D009281 2.0e-60 236.9 255 52.9
Cc06_g07050 Coffea canephora HOM05D007404 ORTHO05D009281 1.1e-55 221.1 248 50.8
Dinv25087 Davidia involucrata HOM05D007404 ORTHO05D009281 2.2e-51 206.8 251 46.6
Actinidia03848 Actinidia chinensis HOM05D007404 ORTHO05D009281 8.0e-49 198.4 249 48.2
Hma1.2p1_0304F.1_g119261 Hydrangea macrophylla HOM05D007404 ORTHO05D009281 4.0e-48 196.1 223 48.9
Solyc11g045270.3 Solanum lycopersicum HOM05D007404 ORTHO05D009281 8.8e-48 194.9 254 46.1
Peaxi162Scf00211g00002 Petunia axillaris HOM05D007404 ORTHO05D009281 7.5e-47 191.8 245 45.7
Sopen11g020730 Solanum pennellii HOM05D007404 ORTHO05D009281 4.8e-46 189.1 249 44.6
PGSC0003DMG400022875 Solanum tuberosum HOM05D007404 ORTHO05D009281 1.1e-45 188.0 261 43.7
Nitab4.5_0012268g0010 Nicotiana tabacum HOM05D007404 ORTHO05D009281 1.8e-45 187.2 231 46.3
vmacro06064 Vaccinium macrocarpon HOM05D007404 ORTHO05D009281 2.7e-44 183.3 226 47.3
Nitab4.5_0000117g0060 Nicotiana tabacum HOM05D007404 ORTHO05D009281 4.5e-44 182.6 246 43.9
CAN.G13.10 Capsicum annuum HOM05D007404 ORTHO05D009281 6.5e-43 178.7 254 43.3
Lj1C1059T6 Lonicera japonica HOM05D007404 ORTHO05D009281 2.1e-41 173.7 249 45.0
Migut.J00747 Erythranthe guttata HOM05D007404 ORTHO05D009281 2.7e-41 173.3 228 44.3
Rhsim03G0257900 Rhododendron simsii HOM05D007404 ORTHO05D009281 3.6e-41 172.9 249 43.8
DCAR_013466 Daucus carota HOM05D007404 ORTHO05D009281 1.4e-40 171.0 248 42.7
Manes.08G038100 Manihot esculenta HOM05D007404 ORTHO05D009281 1.4e-40 171.0 253 41.5
Ciclev10012555m.g Citrus clementina HOM05D007404 ORTHO05D009281 5.2e-40 169.1 254 42.1
Sabra06G0152600 Salix brachista HOM05D007404 ORTHO05D009281 9.8e-39 164.9 248 41.5
TWI74G0134 Tripterygium wilfordii HOM05D007404 ORTHO05D009281 2.2e-38 163.7 256 41.8
Atru.chr8.1254 Acer truncatum HOM05D007404 ORTHO05D009281 2.8e-38 163.3 233 42.5
SGA_v2.0_scaffold112G31676 Striga asiatica HOM05D007404 ORTHO05D009281 2.8e-38 163.3 213 46.5
Eucgr.A02534 Eucalyptus grandis HOM05D007404 ORTHO05D009281 1.1e-37 161.4 260 39.6
Actinidia03958 Actinidia chinensis HOM05D007404 ORTHO05D009281 1.4e-37 161.0 199 47.7
CiPaw.10G021900 Carya illinoinensis HOM05D007404 ORTHO05D009281 1.4e-37 161.0 239 41.4
Potri.006G198500 Populus trichocarpa HOM05D007404 ORTHO05D009281 7.7e-36 155.2 258 40.7
Thecc.05G182600 Theobroma cacao HOM05D007404 ORTHO05D009281 1.0e-35 154.8 268 42.9
VMungo1383G2609 Vigna mungo HOM05D007404 ORTHO05D009281 1.3e-35 154.5 261 39.8
Cfa020098 Carpinus fangiana HOM05D007404 ORTHO05D009281 2.3e-35 153.7 261 40.6
Gorai.002G232900 Gossypium raimondii HOM05D007404 ORTHO05D009281 2.9e-35 153.3 223 43.9
Prupe.7G088400 Prunus persica HOM05D007404 ORTHO05D009281 2.9e-35 153.3 233 45.5
CiPaw.09G024800 Carya illinoinensis HOM05D007404 ORTHO05D009281 5.0e-35 152.5 235 41.3
Duzib093G1799 Durio zibethinus HOM05D007404 ORTHO05D009281 6.6e-35 152.1 270 40.4
Haze_20093 Corylus avellana HOM05D007404 ORTHO05D009281 2.5e-34 150.2 261 39.5
MD14G1045900 Malus domestica HOM05D007404 ORTHO05D009281 2.5e-34 150.2 239 44.8
Medtr7g107080 Medicago truncatula HOM05D007404 ORTHO05D009281 4.3e-34 149.4 234 39.7
QL07p025963 Quercus lobata HOM05D007404 ORTHO05D009281 4.3e-34 149.4 232 41.4
Cpa.g.sc222.4 Carica papaya HOM05D007404 ORTHO05D009281 9.5e-34 148.3 271 39.9
Lalb_Chr25g0287801 Lupinus albus HOM05D007404 ORTHO05D009281 3.6e-33 146.4 235 38.7
Phvul.001G199200 Phaseolus vulgaris HOM05D007404 ORTHO05D009281 3.6e-33 146.4 262 38.9
TPR.G14403 Trifolium pratense HOM05D007404 ORTHO05D009281 3.6e-33 146.4 260 38.1
RcHm_v2.0_Chr3g0477561 Rosa chinensis HOM05D007404 ORTHO05D009281 4.7e-33 146.0 222 39.6
COL.COLO4_29466 Corchorus olitorius HOM05D007404 ORTHO05D009281 1.0e-32 144.8 266 39.5
Glyma.03G205600 Glycine max HOM05D007404 ORTHO05D009281 1.0e-32 144.8 237 40.5
Ca_09089_v3 Cicer arietinum L. HOM05D007404 ORTHO05D009281 1.4e-32 144.4 230 38.7
Glyma.19G203100 Glycine max HOM05D007404 ORTHO05D009281 1.4e-32 144.4 267 36.7
Gohir.A01G199200 Gossypium hirsutum HOM05D007404 ORTHO05D009281 1.4e-32 144.4 222 42.8
Aqoxy1G00574 Aquilegia oxysepala HOM05D007404 ORTHO05D009281 6.8e-32 142.1 232 40.5
Lj1g0004547 Lotus japonicus HOM05D007404 ORTHO05D009281 8.9e-32 141.7 260 39.2
CsaV3_6G041180 Cucumis sativus L. HOM05D007404 ORTHO05D009281 1.2e-31 141.4 252 36.9
FAN05G3976 Fragaria x ananassa HOM05D007404 ORTHO05D009281 1.2e-31 141.4 225 39.6
Nn2g14440 Nelumbo nucifera HOM05D007404 ORTHO05D009281 1.2e-31 141.4 281 39.9
FvH4_6g21130 Fragaria vesca HOM05D007404 ORTHO05D009281 1.5e-31 141.0 229 39.3
MELO3C024593.2 Cucumis melo HOM05D007404 ORTHO05D009281 2.6e-31 140.2 252 35.7
Psat3g026720 Pisum sativum HOM05D007404 ORTHO05D009281 3.4e-31 139.8 229 37.6
ClCG01G015070 Citrullus lanatus HOM05D007404 ORTHO05D009281 4.4e-31 139.4 253 37.9
Nn2g14441 Nelumbo nucifera HOM05D007404 ORTHO05D009281 5.7e-31 139.0 280 38.9
FAN14G5090 Fragaria x ananassa HOM05D007404 ORTHO05D009281 7.5e-31 138.7 229 38.9
PGR004G0377 Punica granatum HOM05D007404 ORTHO05D009281 9.8e-31 138.3 227 40.5
Gohir.D01G189300 Gossypium hirsutum HOM05D007404 ORTHO05D009281 1.3e-30 137.9 221 40.7
arahy.Tifrunner.gnm1.ann1.T424Z8 Arachis hypogaea HOM05D007404 ORTHO05D009281 1.7e-30 137.5 257 36.2
FAN09G0350 Fragaria x ananassa HOM05D007404 ORTHO05D009281 2.2e-30 137.1 225 38.7
Sed0004973 Sechium edule HOM05D007404 ORTHO05D009281 2.9e-30 136.7 247 37.2
CANSAT64G1742 Cannabis sativa HOM05D007404 ORTHO05D009281 8.3e-30 135.2 245 37.6
ECA238G2201 Erigeron canadensis HOM05D007404 ORTHO05D009281 5.4e-29 132.5 214 40.7
Lsat_1_v5_gn_2_102100 Lactuca sativa HOM05D007404 ORTHO05D009281 7.0e-29 132.1 223 41.7
FAN02G0840 Fragaria x ananassa HOM05D007404 ORTHO05D009281 9.2e-29 131.7 225 38.2
Dinv11908 Davidia involucrata HOM05D007404 ORTHO05D009281 1.6e-28 131.0 199 42.7
TAR623G1670 Trochodendron aralioides HOM05D007404 ORTHO05D009281 4.6e-28 129.4 249 40.6
Ah.02g113930 Amaranthus hybridus HOM05D007404 ORTHO05D009281 1.0e-27 128.3 241 37.3
EL10Ac5g11794 Beta vulgaris HOM05D007404 ORTHO05D009281 1.3e-27 127.9 241 38.2
unitig_26.g9157 Utricularia gibba HOM05D000495 ORTHO05D009281 1.3e-27 127.9 238 36.1
AUR62038411 Chenopodium quinoa HOM05D007404 ORTHO05D009281 1.7e-27 127.5 239 36.8
AUR62036300 Chenopodium quinoa HOM05D007404 ORTHO05D009281 2.3e-27 127.1 235 35.7
Sc07g0007250 Simmondsia chinensis HOM05D007404 ORTHO05D009281 9.5e-26 121.7 253 36.4
Hund10780 Selenicereus undatus HOM05D007404 ORTHO05D009281 1.2e-25 121.3 273 34.1
Zm00001eb170760 Zea mays HOM05D007404 ORTHO05D009281 8.9e-24 115.2 232 37.1
THA.LOC104826786 Tarenaya hassleriana HOM05D007404 ORTHO05D009281 9.8e-23 111.7 261 36.0
MBI14_g28309_MAGBIO Magnolia biondii HOM05D007404 ORTHO05D009281 3.7e-22 109.8 288 33.7
HanXRQChr14g0453181 Helianthus annuus HOM05D007404 ORTHO05D009281 8.3e-22 108.6 74 70.3
Aa31LG3G5700 Aethionema arabicum HOM05D007404 ORTHO05D009281 1.9e-21 107.5 93 57.0
Sp3g10090 Schrenkiella parvula HOM05D007404 ORTHO05D009281 2.7e-20 103.6 132 42.4
Carub.0003s1121 Capsella rubella HOM05D007404 ORTHO05D009281 4.6e-20 102.8 126 42.9
SEGI_39351 Sequoiadendron giganteum HOM05D007404 ORTHO05D009281 4.6e-20 102.8 103 52.4
AT3G11890 Arabidopsis thaliana HOM05D007404 ORTHO05D009281 1.7e-19 100.9 83 56.6
BcaB06g25568 Brassica carinata HOM05D007404 ORTHO05D009281 5.0e-19 99.4 83 55.4
BcaC05g29316 Brassica carinata HOM05D007404 ORTHO05D009281 5.0e-19 99.4 83 55.4
A05p37490 Brassica napus HOM05D007404 ORTHO05D009281 5.0e-19 99.4 83 55.4
C05p56050 Brassica napus HOM05D007404 ORTHO05D009281 5.0e-19 99.4 83 55.4
BolC5t34272H Brassica oleracea HOM05D007404 ORTHO05D009281 5.0e-19 99.4 83 55.4
BraA05t22547Z Brassica rapa HOM05D007404 ORTHO05D009281 5.0e-19 99.4 83 55.4
Thhalv10020684m.g Eutrema salsugineum HOM05D007404 ORTHO05D009281 6.6e-19 99.0 83 55.4
ATR0686G215 Amborella trichopoda HOM05D007404 ORTHO05D009281 4.3e-18 96.3 322 29.2
CARHR086420 Cardamine hirsuta HOM05D007404 ORTHO05D009281 5.6e-18 95.9 150 38.7
HPP92_023288 Vanilla planifolia HOM05D007404 ORTHO05D009281 1.6e-17 94.4 87 54.0
Os08g0378800 Oryza sativa ssp. japonica HOM05D007404 ORTHO05D009281 4.7e-17 92.8 86 51.2
CDE09G0274 Ceratophyllum demersum HOM05D007404 ORTHO05D009281 1.4e-13 81.3 248 32.7
Mapoly0022s0106 Marchantia polymorpha HOM05D007404 ORTHO05D009281 4.6e-12 76.3 110 32.7
VMungo1383G0264 Vigna mungo HOM05D002304 ORTHO05D002363 3.1e-08 63.5 133 30.1
Phvul.008G018900 Phaseolus vulgaris HOM05D002304 ORTHO05D002363 5.8e-07 59.3 118 29.7
CANSAT01G2027 Cannabis sativa HOM05D002304 ORTHO05D002363 7.6e-07 58.9 60 48.3
AagrBONN_evm.TU.Sc2ySwM_340.357 Anthoceros agrestis HOM05D007404 ORTHO05D009281 1.3e-06 58.2 117 30.8
Ciclev10031840m.g Citrus clementina HOM05D002304 ORTHO05D002363 1.3e-06 58.2 110 32.7
Manes.09G186400 Manihot esculenta HOM05D002304 ORTHO05D002363 1.3e-06 58.2 65 44.6
CBR_g31169 Chara braunii HOM05D002304 ORTHO05D002363 1.7e-06 57.8 61 41.0
Eucgr.G01957 Eucalyptus grandis HOM05D002304 ORTHO05D002363 1.7e-06 57.8 64 46.9
Phvul.008G018600 Phaseolus vulgaris HOM05D002304 ORTHO05D002363 1.7e-06 57.8 63 41.3
Sabra01G0045200 Salix brachista HOM05D002304 ORTHO05D002363 1.7e-06 57.8 110 33.6
Hund25504 Selenicereus undatus HOM05D002304 ORTHO05D002363 1.7e-06 57.8 67 46.3
vmacro16079 Vaccinium macrocarpon HOM05D002304 ORTHO05D002363 1.7e-06 57.8 57 50.9
Cc04_g08240 Coffea canephora HOM05D002304 ORTHO05D002363 2.2e-06 57.4 57 49.1
QL03p049930 Quercus lobata HOM05D002304 ORTHO05D002363 2.2e-06 57.4 65 41.5
Rhsim12G0098700 Rhododendron simsii HOM05D002304 ORTHO05D002363 2.9e-06 57.0 57 49.1
CSS0042081 Camellia sinensis var. sinensis HOM05D002304 ORTHO05D002363 3.8e-06 56.6 60 46.7
AUR62028858 Chenopodium quinoa HOM05D002304 ORTHO05D002363 4.9e-06 56.2 83 39.8
Ca_07089_v3 Cicer arietinum L. HOM05D002304 ORTHO05D002363 4.9e-06 56.2 116 33.6
Hma1.2p1_0459F.1_g157130 Hydrangea macrophylla HOM05D002304 ORTHO05D002363 4.9e-06 56.2 57 49.1
PSO017G5758 Papaver somniferum HOM05D002304 ORTHO05D002363 4.9e-06 56.2 62 43.5
PSO478G2317 Papaver somniferum HOM05D002304 ORTHO05D002363 4.9e-06 56.2 62 43.5
TWI75G1229 Tripterygium wilfordii HOM05D002304 ORTHO05D002363 4.9e-06 56.2 65 43.1
Actinidia34006 Actinidia chinensis HOM05D002304 ORTHO05D002363 6.4e-06 55.8 57 49.1
CiPaw.05G103300 Carya illinoinensis HOM05D002304 ORTHO05D002363 6.4e-06 55.8 65 41.5
THA.LOC104824608 Tarenaya hassleriana HOM05D002304 ORTHO05D002363 6.4e-06 55.8 57 49.1
Ah.03g135680 Amaranthus hybridus HOM05D002304 ORTHO05D002363 8.4e-06 55.5 57 49.1
Aqoxy5G03200 Aquilegia oxysepala HOM05D002304 ORTHO05D002363 8.4e-06 55.5 57 50.9
AUR62005698 Chenopodium quinoa HOM05D002304 ORTHO05D002363 8.4e-06 55.5 83 38.6
Haze_12481 Corylus avellana HOM05D002304 ORTHO05D002363 8.4e-06 55.5 65 40.0
Potri.003G164600 Populus trichocarpa HOM05D002304 ORTHO05D002363 8.4e-06 55.5 57 49.1
PGR119G0501 Punica granatum HOM05D002304 ORTHO05D002363 8.4e-06 55.5 78 41.0
Sabra03G0119800 Salix brachista HOM05D002304 ORTHO05D002363 8.4e-06 55.5 57 49.1


User provided reference genes

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