Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu063034.1 Olea europaea HOM05D036775 ORTHO05D002394 8.7e-114 413.7 214 100.0
Oeu015766.1 Olea europaea HOM05D036775 ORTHO05D002394 7.4e-73 277.7 273 62.3
Oeu015761.1 Olea europaea HOM05D036775 ORTHO05D002394 9.4e-60 234.2 150 84.7
Migut.J00926 Erythranthe guttata HOM05D002359 ORTHO05D002394 7.3e-20 101.7 87 63.2
SalBow6G4243 Salvia bowleyana HOM05D002359 ORTHO05D002394 5.8e-17 92.0 151 45.0
Dinv42393 Davidia involucrata HOM05D002359 ORTHO05D002394 2.9e-16 89.7 64 71.9
Cc06_g12170 Coffea canephora HOM05D002359 ORTHO05D002394 4.9e-16 89.0 88 56.8
Actinidia39660 Actinidia chinensis HOM05D002359 ORTHO05D002394 6.4e-16 88.6 87 59.8
PGSC0003DMG400013007 Solanum tuberosum HOM05D002359 ORTHO05D002394 1.9e-15 87.0 87 57.5
Nitab4.5_0000073g0150 Nicotiana tabacum HOM05D002359 ORTHO05D002394 3.2e-15 86.3 147 44.9
Actinidia30221 Actinidia chinensis HOM05D002359 ORTHO05D002394 5.4e-15 85.5 87 57.5
Dinv25559 Davidia involucrata HOM05D002359 ORTHO05D002394 2.1e-14 83.6 63 69.8
Rhsim03G0227600 Rhododendron simsii HOM05D002359 ORTHO05D002394 2.7e-14 83.2 80 58.8
Peaxi162Scf00127g01910 Petunia axillaris HOM05D002359 ORTHO05D002394 7.8e-14 81.6 87 55.2
SGA_v2.0_scaffold385G50446 Striga asiatica HOM05D002359 ORTHO05D002394 1.3e-13 80.9 87 52.9
SGA_v2.0_scaffold21G09488 Striga asiatica HOM05D002359 ORTHO05D002394 1.7e-13 80.5 87 54.0
vmacro17200 Vaccinium macrocarpon HOM05D001119 ORTHO05D000862 2.3e-13 80.1 87 56.3
Nitab4.5_0002562g0010 Nicotiana tabacum HOM05D001119 ORTHO05D000862 3.0e-13 79.7 74 58.1
TAR636G1796 Trochodendron aralioides HOM05D002359 ORTHO05D002394 3.0e-13 79.7 88 59.1
Sopen07g021290 Solanum pennellii HOM05D002359 ORTHO05D002394 3.9e-13 79.3 87 54.0
Rhsim05G0007600 Rhododendron simsii HOM05D001119 ORTHO05D000862 5.1e-13 79.0 87 58.6
vmacro06341 Vaccinium macrocarpon HOM05D002359 ORTHO05D002394 5.1e-13 79.0 72 58.3
vmacro17202 Vaccinium macrocarpon HOM05D002359 ORTHO05D002394 5.1e-13 79.0 87 55.2
Nn8g38647 Nelumbo nucifera HOM05D002359 ORTHO05D002394 1.1e-12 77.8 70 62.9
Hma1.2p1_0179F.1_g079530 Hydrangea macrophylla HOM05D002359 ORTHO05D002394 1.5e-12 77.4 62 64.5
Oeu063420.2 Olea europaea HOM05D002359 ORTHO05D002394 2.5e-12 76.6 86 55.8
Solyc07g041830.4 Solanum lycopersicum HOM05D002359 ORTHO05D002394 2.5e-12 76.6 87 52.9
PGSC0003DMG400005597 Solanum tuberosum HOM05D002359 ORTHO05D002394 2.5e-12 76.6 85 54.1
Haze_26012 Corylus avellana HOM05D002359 ORTHO05D002394 4.3e-12 75.9 88 54.5
TPR.G3512 Trifolium pratense HOM05D002359 ORTHO05D002394 5.6e-12 75.5 86 52.3
Nitab4.5_0000024g0200 Nicotiana tabacum HOM05D002359 ORTHO05D002394 1.2e-11 74.3 85 52.9
Haze_18306 Corylus avellana HOM05D002359 ORTHO05D002394 1.6e-11 73.9 87 52.9
QL02p017163 Quercus lobata HOM05D002359 ORTHO05D002394 2.1e-11 73.6 88 51.1
Cfa017864 Carpinus fangiana HOM05D002359 ORTHO05D002394 3.6e-11 72.8 91 54.9
Nitab4.5_0026719g0010 Nicotiana tabacum HOM05D002359 ORTHO05D002394 3.6e-11 72.8 111 45.0
TAR383G0971 Trochodendron aralioides HOM05D002359 ORTHO05D002394 3.6e-11 72.8 85 55.3
Ca_13116_v3 Cicer arietinum L. HOM05D002359 ORTHO05D002394 1.1e-10 71.2 53 60.4
MBI19_g43891_MAGBIO Magnolia biondii HOM05D002359 ORTHO05D002394 1.4e-10 70.9 95 48.4
Lj4A912T26 Lonicera japonica HOM05D002359 ORTHO05D002394 1.8e-10 70.5 87 50.6
Prupe.1G403400 Prunus persica HOM05D002359 ORTHO05D002394 1.8e-10 70.5 66 59.1
Medtr1g015650 Medicago truncatula HOM05D002359 ORTHO05D002394 2.4e-10 70.1 53 60.4
Peaxi162Scf00554g00919 Petunia axillaris HOM05D002359 ORTHO05D002394 3.1e-10 69.7 85 51.8
TAR626G1645 Trochodendron aralioides HOM05D002359 ORTHO05D002394 3.1e-10 69.7 115 45.2
Solyc05g025900.3 Solanum lycopersicum HOM05D002359 ORTHO05D002394 4.0e-10 69.3 86 53.5
Cfa002989 Carpinus fangiana HOM05D002359 ORTHO05D002394 6.9e-10 68.6 69 55.1
TPR.G13173 Trifolium pratense HOM05D002359 ORTHO05D002394 6.9e-10 68.6 63 54.0
QL11p000753 Quercus lobata HOM05D002359 ORTHO05D002394 8.9e-10 68.2 76 50.0
Sed0023350 Sechium edule HOM05D002359 ORTHO05D002394 8.9e-10 68.2 77 50.6
Lj5g0016863 Lotus japonicus HOM05D002359 ORTHO05D002394 1.2e-09 67.8 53 60.4
MD08G1072700 Malus domestica HOM05D002359 ORTHO05D002394 1.2e-09 67.8 67 58.2
Sopen05g021410 Solanum pennellii HOM05D002359 ORTHO05D002394 1.2e-09 67.8 86 52.3
Psat6g021760 Pisum sativum HOM05D002359 ORTHO05D002394 1.5e-09 67.4 63 54.0
Sabra06G0169700 Salix brachista HOM05D002359 ORTHO05D002394 1.5e-09 67.4 89 52.8
ClCG05G015790 Citrullus lanatus HOM05D002359 ORTHO05D002394 2.6e-09 66.6 66 50.0
Duzib168G0434 Durio zibethinus HOM05D002359 ORTHO05D002394 2.6e-09 66.6 87 47.1
Hma1.2p1_0169F.1_g074530 Hydrangea macrophylla HOM05D002359 ORTHO05D002394 3.4e-09 66.2 77 50.6
Medtr3g105210 Medicago truncatula HOM05D002359 ORTHO05D002394 3.4e-09 66.2 74 48.6
Ciclev10024347m.g Citrus clementina HOM05D002359 ORTHO05D002394 5.8e-09 65.5 86 48.8
CsaV3_4G036090 Cucumis sativus L. HOM05D002359 ORTHO05D002394 5.8e-09 65.5 66 48.5
MELO3C016917.2 Cucumis melo HOM05D002359 ORTHO05D002394 7.6e-09 65.1 63 49.2
Manes.16G086200 Manihot esculenta HOM05D002359 ORTHO05D002394 9.9e-09 64.7 66 54.5
SalBow4G0745 Salvia bowleyana HOM05D002359 ORTHO05D002394 1.3e-08 64.3 86 48.8
arahy.Tifrunner.gnm1.ann1.S73L53 Arachis hypogaea HOM05D002359 ORTHO05D002394 1.7e-08 63.9 54 59.3
MBI13_g12064_MAGBIO Magnolia biondii HOM05D002359 ORTHO05D002394 1.7e-08 63.9 78 52.6
Sed0009145 Sechium edule HOM05D002359 ORTHO05D002394 1.7e-08 63.9 66 50.0
arahy.Tifrunner.gnm1.ann1.8GXM4F Arachis hypogaea HOM05D002359 ORTHO05D002394 2.2e-08 63.5 90 50.0
Glyma.14G098200 Glycine max HOM05D002359 ORTHO05D002394 2.9e-08 63.2 67 53.7
Manes.16G095300 Manihot esculenta HOM05D002359 ORTHO05D002394 2.9e-08 63.2 77 46.8
arahy.Tifrunner.gnm1.ann1.V7S84L Arachis hypogaea HOM05D002359 ORTHO05D002394 3.8e-08 62.8 54 57.4
MD15G1049100 Malus domestica HOM05D002359 ORTHO05D002394 3.8e-08 62.8 76 53.9
Manes.03G053700 Manihot esculenta HOM05D002359 ORTHO05D002394 3.8e-08 62.8 79 48.1
Potri.018G048100 Populus trichocarpa HOM05D002359 ORTHO05D002394 3.8e-08 62.8 58 58.6
RcHm_v2.0_Chr6g0311951 Rosa chinensis HOM05D002359 ORTHO05D002394 3.8e-08 62.8 90 50.0
unitig_578.g16407 Utricularia gibba HOM05D002359 ORTHO05D002394 3.8e-08 62.8 91 42.9
CiPaw.04G143200 Carya illinoinensis HOM05D002359 ORTHO05D002394 6.4e-08 62.0 86 46.5
PSO724G0250 Papaver somniferum HOM05D002359 ORTHO05D002394 6.4e-08 62.0 88 48.9
Psat5g030080 Pisum sativum HOM05D002359 ORTHO05D002394 6.4e-08 62.0 83 42.2
arahy.Tifrunner.gnm1.ann1.QE00FV Arachis hypogaea HOM05D002359 ORTHO05D002394 8.4e-08 61.6 90 48.9
Lalb_Chr14g0366431 Lupinus albus HOM05D002359 ORTHO05D002394 8.4e-08 61.6 150 34.0
Potri.006G219800 Populus trichocarpa HOM05D002359 ORTHO05D002394 8.4e-08 61.6 63 55.6
TAR624G0910 Trochodendron aralioides HOM05D002359 ORTHO05D002394 8.4e-08 61.6 63 57.1
MBI19_g10230_MAGBIO Magnolia biondii HOM05D002359 ORTHO05D002394 1.1e-07 61.2 79 49.4
MD15G1217500 Malus domestica HOM05D002359 ORTHO05D002394 1.4e-07 60.8 89 48.3
PSO135G0093 Papaver somniferum HOM05D002359 ORTHO05D002394 1.4e-07 60.8 88 47.7
CiPaw.03G206500 Carya illinoinensis HOM05D002359 ORTHO05D002394 1.9e-07 60.5 88 47.7
Lj1g0009724 Lotus japonicus HOM05D002359 ORTHO05D002394 1.9e-07 60.5 80 47.5
GSVIVG01015083001 Vitis vinifera HOM05D002359 ORTHO05D002394 1.9e-07 60.5 47 55.3
Sabra18G0046100 Salix brachista HOM05D002359 ORTHO05D002394 3.2e-07 59.7 73 50.7
MSTRG.11633 Avicennia marina HOM05D002359 ORTHO05D002394 4.2e-07 59.3 123 36.6
unitig_8.g4685 Utricularia gibba HOM05D002359 ORTHO05D002394 5.4e-07 58.9 88 42.0
Ciclev10008999m.g Citrus clementina HOM05D002359 ORTHO05D002394 7.1e-07 58.5 58 51.7
Duzib150G0040 Durio zibethinus HOM05D002359 ORTHO05D002394 7.1e-07 58.5 85 48.2
Lalb_Chr08g0244771 Lupinus albus HOM05D002359 ORTHO05D002394 9.3e-07 58.2 96 45.8
Duzib168G0700 Durio zibethinus HOM05D002359 ORTHO05D002394 1.2e-06 57.8 39 66.7
Cpa.g.sc126.12 Carica papaya HOM05D002359 ORTHO05D002394 1.6e-06 57.4 130 33.1
Glyma.06G056600 Glycine max HOM05D002359 ORTHO05D002394 1.6e-06 57.4 87 43.7
Thecc.09G064500 Theobroma cacao HOM05D002359 ORTHO05D002394 1.6e-06 57.4 39 66.7
Glyma.17G226500 Glycine max HOM05D002359 ORTHO05D002394 2.1e-06 57.0 54 53.7
MSTRG.1709 Avicennia marina HOM05D002359 ORTHO05D002394 2.7e-06 56.6 84 47.6
Ciclev10009592m.g Citrus clementina HOM05D002359 ORTHO05D002394 2.7e-06 56.6 57 52.6
Gohir.D06G079400 Gossypium hirsutum HOM05D002359 ORTHO05D002394 3.5e-06 56.2 39 61.5
Gorai.010G092500 Gossypium raimondii HOM05D002359 ORTHO05D002394 3.5e-06 56.2 39 61.5
TWI32G0832 Tripterygium wilfordii HOM05D002359 ORTHO05D002394 3.5e-06 56.2 74 47.3
Duzib187G0542 Durio zibethinus HOM05D002359 ORTHO05D002394 4.6e-06 55.8 91 41.8
Duzib187G0643 Durio zibethinus HOM05D002359 ORTHO05D002394 4.6e-06 55.8 85 44.7
Gohir.A06G079800 Gossypium hirsutum HOM05D002359 ORTHO05D002394 4.6e-06 55.8 39 61.5
VMungo0647G0789 Vigna mungo HOM05D002359 ORTHO05D002394 4.6e-06 55.8 145 37.9
CDE06G0466 Ceratophyllum demersum HOM05D002359 ORTHO05D002394 6.0e-06 55.5 78 50.0
Ca_15830_v3 Cicer arietinum L. HOM05D002359 ORTHO05D002394 6.0e-06 55.5 126 31.7


User provided reference genes

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