Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu062869.1 Olea europaea HOM05D004473 ORTHO05D005652 4.4e-33 144.1 73 100.0
SalBow1G8010 Salvia bowleyana HOM05D004473 ORTHO05D005652 3.7e-16 87.8 58 75.9
PGSC0003DMG400041047 Solanum tuberosum HOM05D004473 ORTHO05D005652 1.1e-15 86.3 59 74.6
Nitab4.5_0011099g0050 Nicotiana tabacum HOM05D004473 ORTHO05D005652 3.2e-15 84.7 59 72.9
Solyc00g500048.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 5.4e-15 84.0 59 72.9
Solyc00g500131.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 5.4e-15 84.0 59 72.9
Solyc00g500201.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 5.4e-15 84.0 59 72.9
Solyc00g500295.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 5.4e-15 84.0 59 72.9
Solyc00g500330.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 5.4e-15 84.0 59 72.9
Sopen01g008040 Solanum pennellii HOM05D004473 ORTHO05D005652 5.4e-15 84.0 59 72.9
CAN.G1738.12 Capsicum annuum HOM05D004473 ORTHO05D005652 1.6e-14 82.4 59 72.9
CAN.G85.6 Capsicum annuum HOM05D004473 ORTHO05D005652 1.6e-14 82.4 59 72.9
CAN.G939.10 Capsicum annuum HOM05D004473 ORTHO05D005652 1.6e-14 82.4 59 72.9
Hma1.2p1_4210F.1_g338470 Hydrangea macrophylla HOM05D004473 ORTHO05D005652 1.0e-13 79.7 58 72.4
LjContig00489g0020099 Lotus japonicus HOM05D004473 ORTHO05D005652 2.9e-13 78.2 59 67.8
Lalb_Chr07g0191541 Lupinus albus HOM05D004473 ORTHO05D005652 6.6e-13 77.0 62 64.5
Sed0017792 Sechium edule HOM05D004473 ORTHO05D005652 6.6e-13 77.0 59 64.4
Sed0024057 Sechium edule HOM05D004473 ORTHO05D005652 6.6e-13 77.0 59 64.4
Lsat_1_v5_gn_7_76981 Lactuca sativa HOM05D004473 ORTHO05D005652 8.6e-13 76.6 59 66.1
RcHm_v2.0_CPg0502521 Rosa chinensis HOM05D004473 ORTHO05D005652 8.6e-13 76.6 59 59.3
TWI34G1450 Tripterygium wilfordii HOM05D004473 ORTHO05D005652 1.1e-12 76.3 54 68.5
DCAR_032465 Daucus carota HOM05D004473 ORTHO05D005652 1.5e-12 75.9 58 65.5
HanXRQChr00c0125g0571751 Helianthus annuus HOM05D004473 ORTHO05D005652 1.5e-12 75.9 57 64.9
Atru.chr6.757 Acer truncatum HOM05D004473 ORTHO05D005652 1.9e-12 75.5 57 63.2
Potri.013G138201 Populus trichocarpa HOM05D004473 ORTHO05D005652 1.9e-12 75.5 59 62.7
CAN.G100.39 Capsicum annuum HOM05D004473 ORTHO05D005652 3.3e-12 74.7 56 71.4
HanXRQChr11g0326581 Helianthus annuus HOM05D004473 ORTHO05D005652 3.3e-12 74.7 66 56.1
Lj2P1238T61 Lonicera japonica HOM05D004473 ORTHO05D005652 3.3e-12 74.7 59 62.7
Lj2P1239T154 Lonicera japonica HOM05D004473 ORTHO05D005652 3.3e-12 74.7 59 62.7
HanXRQChr00c0126g0571831 Helianthus annuus HOM05D004473 ORTHO05D005652 5.6e-12 73.9 57 63.2
HanXRQChr00c0368g0574161 Helianthus annuus HOM05D004473 ORTHO05D005652 5.6e-12 73.9 57 63.2
HanXRQChr16g0503951 Helianthus annuus HOM05D004473 ORTHO05D005652 5.6e-12 73.9 57 63.2
HanXRQCPg0579741 Helianthus annuus HOM05D004473 ORTHO05D005652 5.6e-12 73.9 57 63.2
C06p21390 Brassica napus HOM05D004473 ORTHO05D005652 8.0e-11 70.1 59 57.6
BolC2t10578H Brassica oleracea HOM05D004473 ORTHO05D005652 8.0e-11 70.1 59 57.6
BolSC37t60777H Brassica oleracea HOM05D004473 ORTHO05D005652 8.0e-11 70.1 59 57.6
BolSC45t60885H Brassica oleracea HOM05D004473 ORTHO05D005652 8.0e-11 70.1 59 57.6
BolSC45t60929H Brassica oleracea HOM05D004473 ORTHO05D005652 8.0e-11 70.1 59 57.6
BolSC46t60978H Brassica oleracea HOM05D004473 ORTHO05D005652 8.0e-11 70.1 59 57.6
BraSC143t45676Z Brassica rapa HOM05D004473 ORTHO05D005652 8.0e-11 70.1 59 57.6
Thhalv10001851m.g Eutrema salsugineum HOM05D004473 ORTHO05D005652 1.0e-10 69.7 59 59.3
Thhalv10012215m.g Eutrema salsugineum HOM05D004473 ORTHO05D005652 1.0e-10 69.7 59 59.3
PSO548G0076 Papaver somniferum HOM05D004473 ORTHO05D005652 1.4e-10 69.3 59 64.4
BcaC05g28805 Brassica carinata HOM05D004473 ORTHO05D005652 2.3e-10 68.6 59 55.9
Hund28272 Selenicereus undatus HOM05D004473 ORTHO05D005652 2.3e-10 68.6 59 59.3
Hund29000 Selenicereus undatus HOM05D004473 ORTHO05D005652 2.3e-10 68.6 59 59.3
Hund29405 Selenicereus undatus HOM05D004473 ORTHO05D005652 2.3e-10 68.6 59 59.3
Hund29659 Selenicereus undatus HOM05D004473 ORTHO05D005652 2.3e-10 68.6 59 59.3
Hund30056 Selenicereus undatus HOM05D004473 ORTHO05D005652 2.3e-10 68.6 59 59.3
Hund30352 Selenicereus undatus HOM05D004473 ORTHO05D005652 2.3e-10 68.6 59 59.3
ATCG00040 Arabidopsis thaliana HOM05D004473 ORTHO05D005652 3.1e-10 68.2 59 57.6
arahy.Tifrunner.gnm1.ann1.3DS1LI Arachis hypogaea HOM05D004473 ORTHO05D005652 4.0e-10 67.8 57 61.4
arahy.Tifrunner.gnm1.ann1.SGP77C Arachis hypogaea HOM05D004473 ORTHO05D005652 4.0e-10 67.8 57 61.4
EL10As2g23210 Beta vulgaris HOM05D004473 ORTHO05D005652 5.2e-10 67.4 55 60.0
Hund29926 Selenicereus undatus HOM05D004473 ORTHO05D005652 5.2e-10 67.4 59 57.6
ScUNg0001290 Simmondsia chinensis HOM05D004473 ORTHO05D005652 5.2e-10 67.4 70 48.6
Thhalv10028154m.g Eutrema salsugineum HOM05D004473 ORTHO05D005652 6.8e-10 67.0 59 55.9
LjContig00318g0021272 Lotus japonicus HOM05D004473 ORTHO05D005652 6.8e-10 67.0 60 61.7
Nn020s41490 Nelumbo nucifera HOM05D004473 ORTHO05D005652 6.8e-10 67.0 56 62.5
Hund29400 Selenicereus undatus HOM05D004473 ORTHO05D005652 6.8e-10 67.0 59 57.6
Medtr3g035685 Medicago truncatula HOM05D004473 ORTHO05D005652 1.2e-09 66.2 60 58.3
Medtr4g051280 Medicago truncatula HOM05D004473 ORTHO05D005652 1.2e-09 66.2 60 58.3
Hund11181 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.2e-09 66.2 61 54.1
Hund10282 Selenicereus undatus HOM05D004473 ORTHO05D005652 2.0e-09 65.5 56 58.9
Eucgr.D00924 Eucalyptus grandis HOM05D004473 ORTHO05D005652 3.4e-09 64.7 59 55.9
Migut.D01408 Erythranthe guttata HOM05D004473 ORTHO05D005652 4.4e-09 64.3 59 55.9
Hund10684 Selenicereus undatus HOM05D004473 ORTHO05D005652 4.4e-09 64.3 59 54.2
GSVIVG01022885001 Vitis vinifera HOM05D004473 ORTHO05D005652 5.8e-09 63.9 72 43.1
Medtr7g021760 Medicago truncatula HOM05D004473 ORTHO05D005652 9.8e-09 63.2 60 56.7
PGR111G0117 Punica granatum HOM05D004473 ORTHO05D005652 9.8e-09 63.2 53 66.0
Medtr0002s0390 Medicago truncatula HOM05D004473 ORTHO05D005652 9.2e-07 56.6 57 52.6
Gorai.001G044100 Gossypium raimondii HOM05D004473 ORTHO05D005652 2.0e-06 55.5 53 56.6
Hund27810 Selenicereus undatus HOM05D004473 ORTHO05D005652 2.0e-06 55.5 50 56.0


User provided reference genes

Program Settings