Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu062844.1 Olea europaea HOM05D000388 ORTHO05D009843 4.2e-50 201.1 101 100.0
Migut.D01348 Erythranthe guttata HOM05D000388 ORTHO05D009843 1.8e-40 169.1 99 85.9
Migut.J01359 Erythranthe guttata HOM05D000388 ORTHO05D009843 1.8e-40 169.1 99 85.9
HanXRQChr00c0272g0573001 Helianthus annuus HOM05D000388 ORTHO05D009843 3.3e-39 164.9 99 84.8
HanXRQChr00c0439g0574751 Helianthus annuus HOM05D000388 ORTHO05D009843 3.3e-39 164.9 99 84.8
HanXRQChr02g0041691 Helianthus annuus HOM05D000388 ORTHO05D009843 3.3e-39 164.9 99 84.8
HanXRQChr04g0099341 Helianthus annuus HOM05D000388 ORTHO05D009843 3.3e-39 164.9 99 84.8
HanXRQChr05g0151391 Helianthus annuus HOM05D000388 ORTHO05D009843 3.3e-39 164.9 99 84.8
HanXRQChr07g0201051 Helianthus annuus HOM05D000388 ORTHO05D009843 3.3e-39 164.9 99 84.8
HanXRQChr08g0210251 Helianthus annuus HOM05D000388 ORTHO05D009843 3.3e-39 164.9 99 84.8
HanXRQChr10g0282451 Helianthus annuus HOM05D000388 ORTHO05D009843 3.3e-39 164.9 99 84.8
HanXRQChr11g0326691 Helianthus annuus HOM05D000388 ORTHO05D009843 3.3e-39 164.9 99 84.8
HanXRQCPg0579911 Helianthus annuus HOM05D000388 ORTHO05D009843 3.3e-39 164.9 99 84.8
Hma1.2p1_0051F.1_g029490 Hydrangea macrophylla HOM05D000388 ORTHO05D009843 4.3e-39 164.5 99 84.8
RcHm_v2.0_CPg0502271 Rosa chinensis HOM05D000388 ORTHO05D009843 7.4e-39 163.7 99 82.8
Nn020s41509 Nelumbo nucifera HOM05D000388 ORTHO05D009843 2.8e-38 161.8 99 83.8
Nn055s41931 Nelumbo nucifera HOM05D000388 ORTHO05D009843 2.8e-38 161.8 99 83.8
Nn082s42681 Nelumbo nucifera HOM05D000388 ORTHO05D009843 2.8e-38 161.8 99 83.8
Nn287s46145 Nelumbo nucifera HOM05D000388 ORTHO05D009843 2.8e-38 161.8 99 83.8
RcHm_v2.0_Chr3g0491801 Rosa chinensis HOM05D000388 ORTHO05D009843 2.8e-38 161.8 99 80.8
CAN.G142.10 Capsicum annuum HOM05D000388 ORTHO05D009843 3.7e-38 161.4 99 83.8
CAN.G500.81 Capsicum annuum HOM05D000388 ORTHO05D009843 3.7e-38 161.4 99 83.8
CAN.G653.5 Capsicum annuum HOM05D000388 ORTHO05D009843 3.7e-38 161.4 99 83.8
Potri.013G142336 Populus trichocarpa HOM05D000388 ORTHO05D009843 4.8e-38 161.0 99 82.8
BcaC04g20699 Brassica carinata HOM05D000388 ORTHO05D009843 6.3e-38 160.6 99 80.8
Solyc00g500055.1 Solanum lycopersicum HOM05D000388 ORTHO05D009843 8.2e-38 160.2 99 82.8
Solyc00g500137.1 Solanum lycopersicum HOM05D000388 ORTHO05D009843 8.2e-38 160.2 99 82.8
Solyc00g500207.1 Solanum lycopersicum HOM05D000388 ORTHO05D009843 8.2e-38 160.2 99 82.8
Gohir.D08G129080 Gossypium hirsutum HOM05D000388 ORTHO05D009843 1.1e-37 159.8 99 81.8
Lalb_Chr23g0270511 Lupinus albus HOM05D000388 ORTHO05D009843 1.4e-37 159.5 99 81.8
PSO548G0009 Papaver somniferum HOM05D000388 ORTHO05D009843 1.4e-37 159.5 99 81.8
Sed0009296 Sechium edule HOM05D000388 ORTHO05D009843 1.4e-37 159.5 99 80.8
Sed0020360 Sechium edule HOM05D000388 ORTHO05D009843 1.4e-37 159.5 99 80.8
CARHR281990 Cardamine hirsuta HOM05D000388 ORTHO05D009843 1.8e-37 159.1 99 79.8
AL2G20790 Arabidopsis lyrata HOM05D000388 ORTHO05D009843 5.3e-37 157.5 99 79.8
ATCG00330 Arabidopsis thaliana HOM05D000388 ORTHO05D009843 5.3e-37 157.5 99 79.8
PGR111G0009 Punica granatum HOM05D000388 ORTHO05D009843 1.5e-36 156.0 99 79.8
BNapus_Darmor_BZH_scaffold_253p00110 Brassica napus HOM05D000388 ORTHO05D009843 2.6e-36 155.2 99 78.8
BNapus_Darmor_BZH_scaffold_287p00030 Brassica napus HOM05D000388 ORTHO05D000473 2.6e-36 155.2 99 78.8
C09p40130 Brassica napus HOM05D000388 ORTHO05D009843 2.6e-36 155.2 99 78.8
BolC7t41727H Brassica oleracea HOM05D000388 ORTHO05D000473 2.6e-36 155.2 99 78.8
BolSC29t60455H Brassica oleracea HOM05D000388 ORTHO05D000473 2.6e-36 155.2 99 78.8
BolSC45t60943H Brassica oleracea HOM05D000388 ORTHO05D000473 2.6e-36 155.2 99 78.8
BolSC46t60990H Brassica oleracea HOM05D000388 ORTHO05D000473 2.6e-36 155.2 99 78.8
BraSC140t45581Z Brassica rapa HOM05D000388 ORTHO05D000473 2.6e-36 155.2 99 78.8
BraSC151t45706Z Brassica rapa HOM05D000388 ORTHO05D009843 2.6e-36 155.2 99 78.8
BraSC179t45796Z Brassica rapa HOM05D000388 ORTHO05D000473 2.6e-36 155.2 99 78.8
LjContig00318g0006350 Lotus japonicus HOM05D000388 ORTHO05D009843 3.4e-36 154.8 99 78.8
Oeu017222.1 Olea europaea HOM05D000388 ORTHO05D009843 5.9e-36 154.1 99 77.8
Gohir.A03G019500 Gossypium hirsutum HOM05D000388 ORTHO05D009843 1.0e-35 153.3 99 79.8
DCAR_032482 Daucus carota HOM05D000388 ORTHO05D009843 1.7e-35 152.5 99 78.8
Thhalv10011029m.g Eutrema salsugineum HOM05D000388 ORTHO05D009843 2.2e-35 152.1 99 78.8
AL2G21360 Arabidopsis lyrata HOM05D000388 ORTHO05D009843 8.4e-35 150.2 99 76.8
Gohir.A05G086166 Gossypium hirsutum HOM05D000388 ORTHO05D009843 2.5e-34 148.7 99 77.8
Gohir.D09G055500 Gossypium hirsutum HOM05D000388 ORTHO05D009843 2.5e-34 148.7 99 75.8
A06p23300 Brassica napus HOM05D000388 ORTHO05D000473 7.2e-34 147.1 93 78.5
CAN.G679.7 Capsicum annuum HOM05D000388 ORTHO05D009843 9.3e-34 146.7 99 77.8
TWI15G0535 Tripterygium wilfordii HOM05D000388 ORTHO05D009843 9.3e-34 146.7 99 76.8
BolC9t56909H Brassica oleracea HOM05D000388 ORTHO05D009843 1.2e-33 146.4 93 78.5
CiPaw.10G111400 Carya illinoinensis HOM05D000388 ORTHO05D009843 1.2e-33 146.4 86 83.7
Gohir.A01G140300 Gossypium hirsutum HOM05D000388 ORTHO05D009843 4.6e-33 144.4 99 74.7
arahy.Tifrunner.gnm1.ann1.6B1C4L Arachis hypogaea HOM05D000388 ORTHO05D009843 6.1e-33 144.1 98 75.5
Medtr3g035610 Medicago truncatula HOM05D000388 ORTHO05D009843 3.0e-32 141.7 99 74.7
TAR629G1277 Trochodendron aralioides HOM05D000388 ORTHO05D009843 6.7e-32 140.6 86 82.6
LjContig00489g0027265 Lotus japonicus HOM05D000388 ORTHO05D009843 8.7e-32 140.2 91 76.9
Nitab4.5_0025922g0010 Nicotiana tabacum HOM05D000388 ORTHO05D009843 8.7e-32 140.2 86 82.6
Sed0021792 Sechium edule HOM05D000388 ORTHO05D009843 1.1e-31 139.8 99 73.7
Gohir.A01G164720 Gossypium hirsutum HOM05D000388 ORTHO05D009843 1.9e-31 139.0 97 75.3
Nitab4.5_0007186g0040 Nicotiana tabacum HOM05D000388 ORTHO05D009843 1.9e-31 139.0 99 71.7
EL10Ac1g02280 Beta vulgaris HOM05D000388 ORTHO05D009843 4.3e-31 137.9 99 75.8
CSS0013534 Camellia sinensis var. sinensis HOM05D000388 ORTHO05D009843 3.4e-28 128.3 79 82.3
Eucgr.C02020 Eucalyptus grandis HOM05D000388 ORTHO05D009843 3.4e-28 128.3 91 73.6
SEGI_01256 Sequoiadendron giganteum HOM05D000388 ORTHO05D009843 5.0e-27 124.4 99 64.6
Peaxi162Scf00575g00006 Petunia axillaris HOM05D000388 ORTHO05D009843 4.2e-26 121.3 70 82.9
Peaxi162Scf00455g00046 Petunia axillaris HOM05D000388 ORTHO05D009843 1.6e-25 119.4 76 78.9
BolSC44t60854H Brassica oleracea HOM05D000388 ORTHO05D009843 4.6e-25 117.9 93 63.4
CAN.G386.18 Capsicum annuum HOM05D000388 ORTHO05D000473 1.1e-23 113.2 98 61.2
arahy.Tifrunner.gnm1.ann1.FC7Y3W Arachis hypogaea HOM05D000388 ORTHO05D009843 7.4e-23 110.5 72 75.0
Hund28396 Selenicereus undatus HOM05D000388 ORTHO05D009843 1.8e-21 105.9 72 75.0
Gohir.A07G155821 Gossypium hirsutum HOM05D000388 ORTHO05D009843 2.4e-21 105.5 72 75.0
EL10As15g24141 Beta vulgaris HOM05D000388 ORTHO05D009843 4.5e-20 101.3 89 64.0
Nitab4.5_0002607g0050 Nicotiana tabacum HOM05D000388 ORTHO05D009843 1.7e-19 99.4 61 82.0
SMO086G0040 Selaginella moellendorffii HOM05D000388 ORTHO05D009843 3.8e-19 98.2 97 51.5
HanXRQChr16g0506261 Helianthus annuus HOM05D000388 ORTHO05D009843 4.2e-18 94.7 56 85.7
HanXRQChr00c0345g0573851 Helianthus annuus HOM05D000388 ORTHO05D009843 7.2e-18 94.0 54 83.3
Phvul.010G068900 Phaseolus vulgaris HOM05D000388 ORTHO05D009843 3.7e-14 81.6 48 81.2
CsaV3_6G032160 Cucumis sativus L. HOM05D000388 ORTHO05D009843 3.5e-12 75.1 87 56.3
Medtr5g063380 Medicago truncatula HOM05D000388 ORTHO05D009843 3.5e-12 75.1 48 77.1
Hund29903 Selenicereus undatus HOM05D000388 ORTHO05D009843 3.5e-12 75.1 51 80.4
EL10As28g24250 Beta vulgaris HOM05D000388 ORTHO05D000473 1.3e-11 73.2 54 68.5
Medtr8g079770 Medicago truncatula HOM05D000388 ORTHO05D009843 1.5e-10 69.7 51 70.6
arahy.Tifrunner.gnm1.ann1.90KAHV Arachis hypogaea HOM05D000388 ORTHO05D009843 4.0e-08 61.6 97 45.4
arahy.Tifrunner.gnm1.ann1.A3NG1I Arachis hypogaea HOM05D000388 ORTHO05D009843 4.0e-08 61.6 57 63.2
Sopen10g013070 Solanum pennellii HOM05D000388 ORTHO05D009843 6.7e-08 60.8 33 84.8


User provided reference genes

Program Settings