Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu062787.1 Olea europaea HOM05D002165 ORTHO05D001531 5.0e-41 170.6 84 100.0
Oeu062790.1 Olea europaea HOM05D002165 ORTHO05D001531 4.7e-31 137.5 86 86.0
Oeu062782.1 Olea europaea HOM05D002165 ORTHO05D001531 7.5e-29 130.2 82 78.0
Oeu061905.1 Olea europaea HOM05D002165 ORTHO05D001531 1.4e-22 109.4 81 67.9
Migut.N00975 Erythranthe guttata HOM05D002165 ORTHO05D001531 2.4e-19 98.6 84 59.5
Oeu000103.1 Olea europaea HOM05D008018 ORTHO05D001531 3.5e-18 94.7 80 63.8
Cc02_g35880 Coffea canephora HOM05D002165 ORTHO05D001531 1.5e-16 89.4 84 58.3
Migut.B00883 Erythranthe guttata HOM05D002165 ORTHO05D001531 5.6e-16 87.4 85 56.5
Actinidia17737 Actinidia chinensis HOM05D002165 ORTHO05D001531 5.2e-14 80.9 80 55.0
Dinv30952 Davidia involucrata HOM05D002165 ORTHO05D001531 1.7e-12 75.9 59 69.5
Nitab4.5_0005662g0010 Nicotiana tabacum HOM05D002165 ORTHO05D001531 2.2e-12 75.5 69 52.2
DCAR_001884 Daucus carota HOM05D002165 ORTHO05D001531 4.9e-12 74.3 82 50.0
Nitab4.5_0002516g0010 Nicotiana tabacum HOM05D002165 ORTHO05D001531 4.9e-12 74.3 69 52.2
Nitab4.5_0000800g0060 Nicotiana tabacum HOM05D002165 ORTHO05D001531 1.1e-11 73.2 70 58.6
Nitab4.5_0003573g0030 Nicotiana tabacum HOM05D002165 ORTHO05D001531 1.1e-11 73.2 70 58.6
Nitab4.5_0003573g0040 Nicotiana tabacum HOM05D002165 ORTHO05D001531 1.1e-11 73.2 70 58.6
ECA240G0021 Erigeron canadensis HOM05D002165 ORTHO05D001531 2.4e-11 72.0 79 51.9
Lsat_1_v5_gn_9_85041 Lactuca sativa HOM05D002165 ORTHO05D001531 2.4e-11 72.0 84 48.8
Nitab4.5_0003573g0050 Nicotiana tabacum HOM05D002165 ORTHO05D001531 3.2e-11 71.6 71 57.7
Dinv24517 Davidia involucrata HOM05D002165 ORTHO05D001531 5.4e-11 70.9 60 65.0
Solyc01g101260.2 Solanum lycopersicum HOM05D002165 ORTHO05D001531 5.4e-11 70.9 78 50.0
Sopen01g044710 Solanum pennellii HOM05D002165 ORTHO05D001531 5.4e-11 70.9 78 50.0
ClCG00G002170 Citrullus lanatus HOM05D002165 ORTHO05D001531 9.2e-11 70.1 72 54.2
ClCG08G002310 Citrullus lanatus HOM05D002165 ORTHO05D001531 9.2e-11 70.1 72 54.2
ClCG08G002360 Citrullus lanatus HOM05D002165 ORTHO05D001531 9.2e-11 70.1 72 54.2
Peaxi162Scf00194g00002 Petunia axillaris HOM05D002165 ORTHO05D001531 1.2e-10 69.7 76 48.7
Rhsim11G0104900 Rhododendron simsii HOM05D002165 ORTHO05D001531 1.2e-10 69.7 86 50.0
CAN.G1248.15 Capsicum annuum HOM05D002165 ORTHO05D001531 3.5e-10 68.2 69 52.2
ECA240G1387 Erigeron canadensis HOM05D002165 ORTHO05D001531 3.5e-10 68.2 79 50.6
DCAR_001886 Daucus carota HOM05D002165 ORTHO05D001531 4.6e-10 67.8 76 48.7
Dinv30951 Davidia involucrata HOM05D002165 ORTHO05D001531 4.6e-10 67.8 69 60.9
CSS0004014 Camellia sinensis var. sinensis HOM05D002165 ORTHO05D001531 6.0e-10 67.4 68 57.4
Eucgr.H01326 Eucalyptus grandis HOM05D002165 ORTHO05D001531 6.0e-10 67.4 69 55.1
Eucgr.H01327 Eucalyptus grandis HOM05D002165 ORTHO05D001531 6.0e-10 67.4 69 55.1
Eucgr.H01329 Eucalyptus grandis HOM05D002165 ORTHO05D001531 6.0e-10 67.4 69 55.1
Prupe.6G304300 Prunus persica HOM05D002165 ORTHO05D001531 6.0e-10 67.4 69 55.1
DCAR_002291 Daucus carota HOM05D002165 ORTHO05D001531 7.8e-10 67.0 76 47.4
FAN02G1676 Fragaria x ananassa HOM05D002165 ORTHO05D001531 7.8e-10 67.0 69 50.7
FAN09G0584 Fragaria x ananassa HOM05D002165 ORTHO05D001531 7.8e-10 67.0 69 50.7
Lsat_1_v5_gn_9_84961 Lactuca sativa HOM05D002165 ORTHO05D001531 7.8e-10 67.0 84 46.4
DCAR_001885 Daucus carota HOM05D002165 ORTHO05D001531 1.3e-09 66.2 76 47.4
FAN05G4164 Fragaria x ananassa HOM05D002165 ORTHO05D001531 1.3e-09 66.2 69 55.1
Cpa.g.sc48.225 Carica papaya HOM05D002165 ORTHO05D001531 1.7e-09 65.9 67 53.7
MELO3C025017.2 Cucumis melo HOM05D002165 ORTHO05D001531 1.7e-09 65.9 72 55.6
ECA236G1383 Erigeron canadensis HOM05D002165 ORTHO05D001531 1.7e-09 65.9 78 50.0
Eucgr.H01324 Eucalyptus grandis HOM05D002165 ORTHO05D001531 1.7e-09 65.9 69 55.1
CsaV3_6G002670 Cucumis sativus L. HOM05D002165 ORTHO05D001531 2.3e-09 65.5 72 52.8
ECA236G2737 Erigeron canadensis HOM05D002165 ORTHO05D001531 2.3e-09 65.5 82 42.7
Eucgr.H01321 Eucalyptus grandis HOM05D002165 ORTHO05D001531 3.0e-09 65.1 69 52.2
Eucgr.H01325 Eucalyptus grandis HOM05D002165 ORTHO05D001531 3.0e-09 65.1 69 53.6
Eucgr.H01333 Eucalyptus grandis HOM05D002165 ORTHO05D001531 3.9e-09 64.7 69 52.2
CSS0044388 Camellia sinensis var. sinensis HOM05D002165 ORTHO05D001531 5.1e-09 64.3 70 57.1
Eucgr.H01330 Eucalyptus grandis HOM05D002165 ORTHO05D001531 5.1e-09 64.3 69 53.6
RcHm_v2.0_Chr1g0321401 Rosa chinensis HOM05D002165 ORTHO05D001531 5.1e-09 64.3 84 45.2
Eucgr.H01328 Eucalyptus grandis HOM05D002165 ORTHO05D001531 6.6e-09 63.9 69 53.6
Eucgr.H01332 Eucalyptus grandis HOM05D002165 ORTHO05D001531 6.6e-09 63.9 69 52.2
TAR633G1086 Trochodendron aralioides HOM05D002165 ORTHO05D001531 6.6e-09 63.9 69 50.7
FvH4_6g08530 Fragaria vesca HOM05D002165 ORTHO05D001531 8.7e-09 63.5 69 53.6
FAN14G5435 Fragaria x ananassa HOM05D002165 ORTHO05D001531 8.7e-09 63.5 69 53.6
Lsat_1_v5_gn_7_63540 Lactuca sativa HOM05D002165 ORTHO05D001531 8.7e-09 63.5 82 46.3
Lsat_1_v5_gn_7_63620 Lactuca sativa HOM05D002165 ORTHO05D001531 8.7e-09 63.5 79 48.1
ECA240G3242 Erigeron canadensis HOM05D002165 ORTHO05D001531 1.5e-08 62.8 82 45.1
Eucgr.L03552 Eucalyptus grandis HOM05D002165 ORTHO05D001531 1.5e-08 62.8 71 54.9
MD04G1186400 Malus domestica HOM05D002165 ORTHO05D001531 1.9e-08 62.4 69 53.6
DCAR_002292 Daucus carota HOM05D002165 ORTHO05D001531 3.3e-08 61.6 78 46.2
Lsat_1_v5_gn_7_63880 Lactuca sativa HOM05D002165 ORTHO05D001531 3.3e-08 61.6 79 44.3
Prupe.6G304200 Prunus persica HOM05D002165 ORTHO05D001531 3.3e-08 61.6 69 53.6
Atru.chr12.1534 Acer truncatum HOM05D002165 ORTHO05D001531 4.3e-08 61.2 73 52.1
Atru.chr12.1536 Acer truncatum HOM05D002165 ORTHO05D001531 4.3e-08 61.2 73 52.1
ECA240G3359 Erigeron canadensis HOM05D002165 ORTHO05D001531 4.3e-08 61.2 79 48.1
Sed0026735 Sechium edule HOM05D002165 ORTHO05D001531 4.3e-08 61.2 69 47.8
CSS0027376 Camellia sinensis var. sinensis HOM05D002165 ORTHO05D001531 5.6e-08 60.8 73 50.7
RcHm_v2.0_Chr3g0458591 Rosa chinensis HOM05D002165 ORTHO05D001531 5.6e-08 60.8 84 44.0
TAR362G0276 Trochodendron aralioides HOM05D002165 ORTHO05D001531 5.6e-08 60.8 74 44.6
DCAR_001887 Daucus carota HOM05D002165 ORTHO05D001531 7.3e-08 60.5 78 46.2
Eucgr.H01323 Eucalyptus grandis HOM05D002165 ORTHO05D001531 7.3e-08 60.5 69 44.9
Eucgr.H01331 Eucalyptus grandis HOM05D002165 ORTHO05D001531 7.3e-08 60.5 71 49.3
MELO3C025020.2 Cucumis melo HOM05D002165 ORTHO05D001531 9.6e-08 60.1 76 52.6
Lsat_1_v5_gn_9_85080 Lactuca sativa HOM05D002165 ORTHO05D001531 9.6e-08 60.1 76 47.4
Glyma.10G143000 Glycine max HOM05D008018 ORTHO05D001531 1.6e-07 59.3 71 47.9
Lj1g0006603 Lotus japonicus HOM05D008018 ORTHO05D001531 2.1e-07 58.9 71 50.7
THA.LOC104818754 Tarenaya hassleriana HOM05D002165 ORTHO05D001531 2.1e-07 58.9 69 46.4
Glyma.03G228000 Glycine max HOM05D008018 ORTHO05D001531 2.8e-07 58.5 73 47.9
Phvul.007G205300 Phaseolus vulgaris HOM05D008018 ORTHO05D001531 2.8e-07 58.5 71 50.7
Lalb_Chr21g0310041 Lupinus albus HOM05D008018 ORTHO05D001531 3.6e-07 58.2 69 47.8
Ciclev10013220m.g Citrus clementina HOM05D002165 ORTHO05D001531 4.7e-07 57.8 90 42.2
Actinidia22854 Actinidia chinensis HOM05D049884 ORTHO05D055390 6.2e-07 57.4 62 51.6
arahy.Tifrunner.gnm1.ann1.RMBA11 Arachis hypogaea HOM05D008018 ORTHO05D001531 6.2e-07 57.4 71 52.1
Glyma.20G091900 Glycine max HOM05D008018 ORTHO05D001531 6.2e-07 57.4 70 55.7
CARHR186860 Cardamine hirsuta HOM05D002165 ORTHO05D001531 8.1e-07 57.0 70 44.3
Manes.03G213400 Manihot esculenta HOM05D002165 ORTHO05D001531 8.1e-07 57.0 69 47.8
Medtr0187s0030 Medicago truncatula HOM05D008018 ORTHO05D001531 8.1e-07 57.0 70 48.6
Medtr0187s0060 Medicago truncatula HOM05D008018 ORTHO05D001531 8.1e-07 57.0 70 48.6
Aqoxy5G02840 Aquilegia oxysepala HOM05D002165 ORTHO05D001531 1.1e-06 56.6 68 48.5
MELO3C015240.2 Cucumis melo HOM05D002165 ORTHO05D001531 1.1e-06 56.6 78 48.7
Sed0022046 Sechium edule HOM05D002165 ORTHO05D001531 1.1e-06 56.6 73 50.7
Sc16g0009410 Simmondsia chinensis HOM05D002165 ORTHO05D001531 1.1e-06 56.6 83 43.4
PGSC0003DMG400018282 Solanum tuberosum HOM05D002165 ORTHO05D001531 1.1e-06 56.6 61 52.5
GSVIVG01017704001 Vitis vinifera HOM05D002165 ORTHO05D001531 1.1e-06 56.6 71 52.1
arahy.Tifrunner.gnm1.ann1.1WI4WZ Arachis hypogaea HOM05D008018 ORTHO05D001531 1.4e-06 56.2 71 50.7
arahy.Tifrunner.gnm1.ann1.R57IYC Arachis hypogaea HOM05D008018 ORTHO05D001531 1.4e-06 56.2 72 54.2
Ciclev10013222m.g Citrus clementina HOM05D002165 ORTHO05D001531 1.4e-06 56.2 72 51.4
Lalb_Chr02g0147521 Lupinus albus HOM05D008018 ORTHO05D001531 1.4e-06 56.2 70 47.1
Psat6g154000 Pisum sativum HOM05D008018 ORTHO05D001531 1.4e-06 56.2 72 50.0
Prupe.4G278700 Prunus persica HOM05D002165 ORTHO05D001531 1.4e-06 56.2 89 44.9
GSVIVG01017705001 Vitis vinifera HOM05D002165 ORTHO05D001531 1.4e-06 56.2 71 52.1
GSVIVG01017706001 Vitis vinifera HOM05D002165 ORTHO05D001531 1.4e-06 56.2 71 52.1
Ca_10205_v3 Cicer arietinum L. HOM05D008018 ORTHO05D001531 1.8e-06 55.8 70 45.7
ECA240G0866 Erigeron canadensis HOM05D002165 ORTHO05D001531 1.8e-06 55.8 84 41.7
Eucgr.H01334 Eucalyptus grandis HOM05D002165 ORTHO05D001531 1.8e-06 55.8 69 49.3
Gohir.A02G059800 Gossypium hirsutum HOM05D002165 ORTHO05D001531 1.8e-06 55.8 68 45.6
Gohir.D02G065400 Gossypium hirsutum HOM05D002165 ORTHO05D001531 1.8e-06 55.8 68 45.6
Gorai.005G074100 Gossypium raimondii HOM05D002165 ORTHO05D001531 1.8e-06 55.8 68 45.6
Sed0002745 Sechium edule HOM05D002165 ORTHO05D001531 1.8e-06 55.8 72 47.2
Psat2g102520 Pisum sativum HOM05D008018 ORTHO05D001531 2.4e-06 55.5 71 52.1
GSVIVG01017707001 Vitis vinifera HOM05D002165 ORTHO05D001531 2.4e-06 55.5 71 50.7
Carub.0006s2437 Capsella rubella HOM05D002165 ORTHO05D001531 3.1e-06 55.1 70 42.9
Ca_10204_v3 Cicer arietinum L. HOM05D008018 ORTHO05D001531 3.1e-06 55.1 70 47.1
Glyma.10G143300 Glycine max HOM05D008018 ORTHO05D001531 3.1e-06 55.1 70 50.0
Lsat_1_v5_gn_7_63581 Lactuca sativa HOM05D002165 ORTHO05D001531 3.1e-06 55.1 78 43.6
Psat3g015160 Pisum sativum HOM05D008018 ORTHO05D001531 3.1e-06 55.1 70 45.7
AL6G38560 Arabidopsis lyrata HOM05D002165 ORTHO05D001531 4.0e-06 54.7 70 42.9
MELO3C004151.2 Cucumis melo HOM05D002165 ORTHO05D001531 4.0e-06 54.7 71 46.5
Phvul.007G205400 Phaseolus vulgaris HOM05D008018 ORTHO05D001531 4.0e-06 54.7 71 47.9
Phvul.007G205600 Phaseolus vulgaris HOM05D008018 ORTHO05D001531 4.0e-06 54.7 71 47.9
Ciclev10006471m.g Citrus clementina HOM05D002165 ORTHO05D001531 5.2e-06 54.3 80 46.2
CsaV3_1G038050 Cucumis sativus L. HOM05D002165 ORTHO05D001531 5.2e-06 54.3 78 46.2
Thhalv10005460m.g Eutrema salsugineum HOM05D002165 ORTHO05D001531 5.2e-06 54.3 67 43.3
Lj5g0006453 Lotus japonicus HOM05D008018 ORTHO05D001531 5.2e-06 54.3 76 48.7
Lj5g0009947 Lotus japonicus HOM05D008018 ORTHO05D001531 5.2e-06 54.3 76 48.7
Phvul.001G221900 Phaseolus vulgaris HOM05D008018 ORTHO05D001531 5.2e-06 54.3 74 48.6
Psat6g153880 Pisum sativum HOM05D008018 ORTHO05D001531 5.2e-06 54.3 70 47.1
PGR083G0845 Punica granatum HOM05D002165 ORTHO05D001531 5.2e-06 54.3 73 49.3
BcaNung03681 Brassica carinata HOM05D002165 ORTHO05D001531 6.9e-06 53.9 69 44.9
C07p41550 Brassica napus HOM05D002165 ORTHO05D001531 6.9e-06 53.9 69 44.9
BolC7t44687H Brassica oleracea HOM05D002165 ORTHO05D001531 6.9e-06 53.9 69 44.9
Dinv24516 Davidia involucrata HOM05D002165 ORTHO05D179278 6.9e-06 53.9 140 35.0
Glyma.10G143200 Glycine max HOM05D008018 ORTHO05D001531 6.9e-06 53.9 69 47.8
Glyma.19G225200 Glycine max HOM05D008018 ORTHO05D001531 6.9e-06 53.9 73 46.6
Gohir.A09G242300 Gossypium hirsutum HOM05D002165 ORTHO05D001531 6.9e-06 53.9 68 44.1
Sed0016802 Sechium edule HOM05D002165 ORTHO05D001531 6.9e-06 53.9 73 45.2
Ca_10206_v3 Cicer arietinum L. HOM05D008018 ORTHO05D001531 9.0e-06 53.5 69 43.5
Psat6g154040 Pisum sativum HOM05D008018 ORTHO05D001531 9.0e-06 53.5 70 47.1
Sed0018337 Sechium edule HOM05D002165 ORTHO05D001531 9.0e-06 53.5 72 45.8


User provided reference genes

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