Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu062762.2 Olea europaea HOM05D006363 ORTHO05D007920 3.6e-109 398.3 206 100.0
Peaxi162Scf00915g00018 Petunia axillaris HOM05D006363 ORTHO05D007920 1.2e-80 303.5 206 75.2
Nitab4.5_0001508g0030 Nicotiana tabacum HOM05D006363 ORTHO05D007920 1.9e-78 296.2 206 75.2
Rhsim09G0197500 Rhododendron simsii HOM05D006363 ORTHO05D007920 2.5e-78 295.8 198 76.3
Dinv28459 Davidia involucrata HOM05D006363 ORTHO05D007920 4.3e-78 295.0 206 72.8
vmacro09843 Vaccinium macrocarpon HOM05D006363 ORTHO05D007920 5.7e-78 294.7 198 77.8
Nitab4.5_0000716g0210 Nicotiana tabacum HOM05D006363 ORTHO05D007920 1.1e-76 290.4 206 73.8
PGSC0003DMG400014325 Solanum tuberosum HOM05D006363 ORTHO05D007920 5.3e-76 288.1 206 74.3
Sopen03g004810 Solanum pennellii HOM05D006363 ORTHO05D007920 6.9e-76 287.7 207 74.4
Migut.F01133 Erythranthe guttata HOM05D006363 ORTHO05D007920 9.0e-76 287.3 205 70.7
Solyc03g025990.1 Solanum lycopersicum HOM05D006363 ORTHO05D007920 9.0e-76 287.3 207 74.9
Cc03_g13850 Coffea canephora HOM05D006363 ORTHO05D007920 1.2e-75 287.0 200 74.5
Duzib205G1779 Durio zibethinus HOM05D006363 ORTHO05D007920 5.9e-75 284.6 201 71.1
Ciclev10007013m.g Citrus clementina HOM05D006363 ORTHO05D007920 7.6e-75 284.3 207 71.0
AUR62021214 Chenopodium quinoa HOM05D006363 ORTHO05D007920 3.8e-74 282.0 206 70.4
MSTRG.8448 Avicennia marina HOM05D006363 ORTHO05D007920 6.5e-74 281.2 207 70.5
AUR62016007 Chenopodium quinoa HOM05D006363 ORTHO05D007920 1.1e-73 280.4 195 72.3
CSS0002932 Camellia sinensis var. sinensis HOM05D006363 ORTHO05D007920 2.5e-73 279.3 206 70.9
CSS0028509 Camellia sinensis var. sinensis HOM05D006363 ORTHO05D007920 2.5e-73 279.3 206 70.9
Nn6g34197 Nelumbo nucifera HOM05D006363 ORTHO05D007920 2.5e-73 279.3 203 72.4
EL10Ac3g05667 Beta vulgaris HOM05D006363 ORTHO05D007920 4.2e-73 278.5 195 71.8
COL.COLO4_14288 Corchorus olitorius HOM05D006363 ORTHO05D007920 3.6e-72 275.4 199 69.8
TWI39G0139 Tripterygium wilfordii HOM05D006363 ORTHO05D007920 3.6e-72 275.4 201 69.7
Psat6g200600 Pisum sativum HOM05D006363 ORTHO05D007920 4.6e-72 275.0 199 69.8
Gohir.A12G258900 Gossypium hirsutum HOM05D006363 ORTHO05D007920 1.0e-71 273.9 201 69.2
Thecc.03G174500 Theobroma cacao HOM05D006363 ORTHO05D007920 1.0e-71 273.9 201 69.7
Gorai.008G278600 Gossypium raimondii HOM05D006363 ORTHO05D007920 1.3e-71 273.5 201 68.7
THA.LOC104811988 Tarenaya hassleriana HOM05D006363 ORTHO05D007920 2.3e-71 272.7 207 69.1
Aqoxy7G00395 Aquilegia oxysepala HOM05D006363 ORTHO05D007920 3.0e-71 272.3 210 69.5
Gohir.D12G260100 Gossypium hirsutum HOM05D006363 ORTHO05D007920 3.0e-71 272.3 201 68.2
Lj8C25T12 Lonicera japonica HOM05D006363 ORTHO05D007920 3.0e-71 272.3 199 71.4
Lsat_1_v5_gn_2_133820 Lactuca sativa HOM05D006363 ORTHO05D007920 3.9e-71 271.9 207 68.1
Medtr1g100753 Medicago truncatula HOM05D006363 ORTHO05D007920 3.9e-71 271.9 199 68.8
Prupe.2G292400 Prunus persica HOM05D006363 ORTHO05D007920 8.7e-71 270.8 207 69.1
Phvul.007G068100 Phaseolus vulgaris HOM05D006363 ORTHO05D007920 1.1e-70 270.4 196 70.4
Carub.0008s1228 Capsella rubella HOM05D006363 ORTHO05D007920 1.5e-70 270.0 208 67.8
Atru.chr1.482 Acer truncatum HOM05D006363 ORTHO05D007920 1.9e-70 269.6 200 71.5
HanXRQChr14g0462221 Helianthus annuus HOM05D006363 ORTHO05D007920 1.9e-70 269.6 206 68.0
Thhalv10015742m.g Eutrema salsugineum HOM05D006363 ORTHO05D007920 2.5e-70 269.2 207 67.6
Glyma.10G237500 Glycine max HOM05D006363 ORTHO05D007920 4.3e-70 268.5 207 66.2
AL8G26570 Arabidopsis lyrata HOM05D006363 ORTHO05D007920 5.7e-70 268.1 202 69.8
MD01G1199000 Malus domestica HOM05D006363 ORTHO05D007920 5.7e-70 268.1 198 69.7
TPR.G14326 Trifolium pratense HOM05D006363 ORTHO05D007920 5.7e-70 268.1 210 66.2
ECA238G0548 Erigeron canadensis HOM05D006363 ORTHO05D007920 1.3e-69 266.9 200 68.5
CARHR265110 Cardamine hirsuta HOM05D006363 ORTHO05D007920 1.6e-69 266.5 206 68.4
Sp6g14440 Schrenkiella parvula HOM05D006363 ORTHO05D007920 1.6e-69 266.5 207 66.2
Cfa008303 Carpinus fangiana HOM05D006363 ORTHO05D007920 2.2e-69 266.2 200 67.0
Ca_10782_v3 Cicer arietinum L. HOM05D006363 ORTHO05D007920 3.7e-69 265.4 200 68.0
Sabra15G0151200 Salix brachista HOM05D006363 ORTHO05D007920 3.7e-69 265.4 200 67.0
Aa31LG3G8570 Aethionema arabicum HOM05D006363 ORTHO05D007920 4.8e-69 265.0 199 70.9
FAN03G1027 Fragaria x ananassa HOM05D006363 ORTHO05D007920 4.8e-69 265.0 208 66.3
QL09p014582 Quercus lobata HOM05D006363 ORTHO05D007920 4.8e-69 265.0 201 67.2
VMungo0720G1872 Vigna mungo HOM05D006363 ORTHO05D007920 4.8e-69 265.0 196 68.9
FvH4_7g29240 Fragaria vesca HOM05D006363 ORTHO05D007920 6.3e-69 264.6 208 66.3
FAN06G3284 Fragaria x ananassa HOM05D006363 ORTHO05D007920 6.3e-69 264.6 208 66.3
FAN06G3928 Fragaria x ananassa HOM05D006363 ORTHO05D007920 6.3e-69 264.6 208 66.3
FAN10G0438 Fragaria x ananassa HOM05D006363 ORTHO05D007920 8.2e-69 264.2 208 66.3
Glyma.20G157100 Glycine max HOM05D006363 ORTHO05D007920 8.2e-69 264.2 196 68.9
BcaC01g06171 Brassica carinata HOM05D006363 ORTHO05D007920 1.1e-68 263.8 207 66.7
BraA03t10870Z Brassica rapa HOM05D006363 ORTHO05D007920 2.4e-68 262.7 207 66.7
Haze_13734 Corylus avellana HOM05D006363 ORTHO05D007920 2.4e-68 262.7 201 66.2
Manes.07G111200 Manihot esculenta HOM05D006363 ORTHO05D007920 2.4e-68 262.7 200 67.5
Potri.015G140600 Populus trichocarpa HOM05D006363 ORTHO05D007920 2.4e-68 262.7 199 65.8
BcaB01g04190 Brassica carinata HOM05D006363 ORTHO05D007920 4.1e-68 261.9 207 65.7
BolC3t14244H Brassica oleracea HOM05D006363 ORTHO05D007920 5.3e-68 261.5 207 65.7
CANSAT21G2254 Cannabis sativa HOM05D006363 ORTHO05D007920 5.3e-68 261.5 202 66.8
RcHm_v2.0_Chr1g0376991 Rosa chinensis HOM05D006363 ORTHO05D007920 5.3e-68 261.5 206 64.6
C03p18470 Brassica napus HOM05D006363 ORTHO05D007920 6.9e-68 261.2 207 66.2
AT5G52190 Arabidopsis thaliana HOM05D006363 ORTHO05D007920 9.1e-68 260.8 209 66.0
PGR042G3170 Punica granatum HOM05D006363 ORTHO05D007920 9.1e-68 260.8 200 66.5
GSVIVG01010552001 Vitis vinifera HOM05D006363 ORTHO05D007920 1.2e-67 260.4 201 67.2
CANSAT21G0627 Cannabis sativa HOM05D006363 ORTHO05D007920 1.5e-67 260.0 202 67.3
Eucgr.A02801 Eucalyptus grandis HOM05D006363 ORTHO05D007920 1.5e-67 260.0 207 63.8
CiPaw.03G104700 Carya illinoinensis HOM05D006363 ORTHO05D007920 2.0e-67 259.6 199 66.8
CAN.G947.11 Capsicum annuum HOM05D006363 ORTHO05D007920 2.6e-67 259.2 196 71.4
Ah.13g075440 Amaranthus hybridus HOM05D006363 ORTHO05D007920 5.9e-67 258.1 192 68.2
PSO478G1739 Papaver somniferum HOM05D006363 ORTHO05D007920 5.9e-67 258.1 225 63.6
PSO782G5704 Papaver somniferum HOM05D006363 ORTHO05D007920 5.9e-67 258.1 227 62.6
Cpa.g.sc107.33 Carica papaya HOM05D006363 ORTHO05D007920 7.7e-67 257.7 201 65.2
MD07G1266800 Malus domestica HOM05D006363 ORTHO05D007920 2.9e-66 255.8 199 66.3
FAN03G1282 Fragaria x ananassa HOM05D006363 ORTHO05D007920 3.8e-66 255.4 208 65.4
DCAR_018188 Daucus carota HOM05D006363 ORTHO05D007920 5.0e-66 255.0 206 64.6
TAR375G0304 Trochodendron aralioides HOM05D006363 ORTHO05D007920 1.1e-65 253.8 185 71.4
MELO3C006895.2 Cucumis melo HOM05D006363 ORTHO05D007920 1.4e-65 253.4 200 64.0
unitig_60.g25545 Utricularia gibba HOM05D006363 ORTHO05D007920 1.4e-65 253.4 195 68.7
CsaV3_3G016980 Cucumis sativus L. HOM05D006363 ORTHO05D007920 1.2e-64 250.4 200 63.5
LjContig00238g0019616 Lotus japonicus HOM05D006363 ORTHO05D007920 1.6e-64 250.0 209 62.7
Sed0019375 Sechium edule HOM05D006363 ORTHO05D007920 1.4e-63 246.9 200 65.0
Lalb_Chr02g0140961 Lupinus albus HOM05D006363 ORTHO05D007920 3.9e-63 245.4 196 64.3
MBI04_g04731_MAGBIO Magnolia biondii HOM05D006363 ORTHO05D007920 2.8e-61 239.2 203 61.6
Zm00001eb428810 Zea mays HOM05D006363 ORTHO05D007920 1.7e-58 229.9 203 61.1
CDE04G1845 Ceratophyllum demersum HOM05D006363 ORTHO05D007920 3.6e-56 222.2 188 63.8
Os04g0568600 Oryza sativa ssp. japonica HOM05D006363 ORTHO05D007920 1.8e-55 219.9 194 60.3
HPP92_021110 Vanilla planifolia HOM05D006363 ORTHO05D007920 1.3e-53 213.8 177 63.8
ATR0757G111 Amborella trichopoda HOM05D006363 ORTHO05D007920 5.9e-51 204.9 202 55.0
A03p15800 Brassica napus HOM05D006363 ORTHO05D007920 1.7e-50 203.4 145 71.0
Sc25g0000440 Simmondsia chinensis HOM05D006363 ORTHO05D007920 1.4e-47 193.7 164 65.2
SalBow2G2214 Salvia bowleyana HOM05D006363 ORTHO05D007920 2.3e-47 193.0 149 69.1
FAN01G1422 Fragaria x ananassa HOM05D006363 ORTHO05D007920 8.8e-47 191.0 208 52.9
SEGI_31787 Sequoiadendron giganteum HOM05D006363 ORTHO05D007920 3.1e-44 182.6 204 50.5
Pp3c6_24270 Physcomitrium patens HOM05D006363 ORTHO05D007920 3.5e-43 179.1 213 49.3
SMO367G0077 Selaginella moellendorffii HOM05D006363 ORTHO05D007920 8.8e-39 164.5 172 54.7
A08p37210 Brassica napus HOM05D006363 ORTHO05D007920 1.1e-33 147.5 122 63.1
BcaC01g06168 Brassica carinata HOM05D006363 ORTHO05D007920 5.6e-25 118.6 100 64.0
BcaC06g36545 Brassica carinata HOM05D006363 ORTHO05D007920 4.7e-24 115.5 86 68.6
Mapoly0047s0087 Marchantia polymorpha HOM05D006363 ORTHO05D007920 2.3e-23 113.2 172 44.2
Pp3c17_12800 Physcomitrium patens HOM05D006363 ORTHO05D007920 2.4e-20 103.2 172 41.3
BolC5t32613H Brassica oleracea HOM05D006363 ORTHO05D007920 2.8e-16 89.7 106 51.9
C05p38730 Brassica napus HOM05D006363 ORTHO05D007920 1.1e-15 87.8 106 50.9
TPR.G33086 Trifolium pratense HOM05D006363 ORTHO05D007920 1.4e-15 87.4 62 69.4
TAR633G0106 Trochodendron aralioides HOM05D006363 ORTHO05D007920 1.4e-15 87.4 81 59.3
TAR291G0005 Trochodendron aralioides HOM05D006363 ORTHO05D007920 1.8e-15 87.0 70 62.9
TAR375G0495 Trochodendron aralioides HOM05D006363 ORTHO05D007920 1.8e-15 87.0 70 62.9
TAR624G1193 Trochodendron aralioides HOM05D006363 ORTHO05D007920 1.8e-15 87.0 70 62.9
TAR633G1276 Trochodendron aralioides HOM05D006363 ORTHO05D007920 1.2e-14 84.3 70 61.4
TAR629G0450 Trochodendron aralioides HOM05D006363 ORTHO05D007920 1.5e-14 84.0 70 61.4
TAR383G0849 Trochodendron aralioides HOM05D003653 ORTHO05D004249 2.6e-14 83.2 70 60.0
TAR614G0003 Trochodendron aralioides HOM05D006363 ORTHO05D007920 2.6e-14 83.2 70 60.0
BcaC01g06167 Brassica carinata HOM05D006363 ORTHO05D007920 2.2e-13 80.1 51 68.6
Actinidia03116 Actinidia chinensis HOM05D006363 ORTHO05D007920 6.4e-13 78.6 107 46.7
BcaC05g27871 Brassica carinata HOM05D006363 ORTHO05D007920 1.6e-08 63.9 105 45.7
Nitab4.5_0006622g0070 Nicotiana tabacum HOM05D006363 ORTHO05D007920 7.5e-06 55.1 43 67.4


User provided reference genes

Program Settings