Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu062744.1 Olea europaea HOM05D008129 ORTHO05D010232 2.5e-77 292.0 141 100.0
Oeu029783.1 Olea europaea HOM05D008129 ORTHO05D010232 1.6e-39 166.4 139 63.3
Dinv38993 Davidia involucrata HOM05D008129 ORTHO05D010232 4.8e-20 101.7 88 55.7
Hma1.2p1_0514F.1_g169980 Hydrangea macrophylla HOM05D008129 ORTHO05D010232 2.6e-18 95.9 91 54.9
Rhsim07G0093300 Rhododendron simsii HOM05D008129 ORTHO05D010232 1.7e-17 93.2 92 53.3
Cc08_g14170 Coffea canephora HOM05D008129 ORTHO05D010232 2.9e-17 92.4 88 54.5
Lj2P194T38 Lonicera japonica HOM05D008129 ORTHO05D010232 3.8e-17 92.0 83 51.8
TAR629G0329 Trochodendron aralioides HOM05D008129 ORTHO05D010232 1.4e-16 90.1 100 48.0
Migut.E01284 Erythranthe guttata HOM05D008129 ORTHO05D010232 9.4e-16 87.4 82 56.1
CSS0008314 Camellia sinensis var. sinensis HOM05D008129 ORTHO05D010232 1.6e-15 86.7 86 52.3
SGA_v2.0_scaffold144G35967 Striga asiatica HOM05D008129 ORTHO05D010232 2.1e-15 86.3 88 54.5
CSS0045994 Camellia sinensis var. sinensis HOM05D008129 ORTHO05D010232 6.1e-15 84.7 87 54.0
Dinv37674 Davidia involucrata HOM05D008129 ORTHO05D010232 3.9e-14 82.0 57 71.9
ECA246G2221 Erigeron canadensis HOM05D008129 ORTHO05D010232 6.7e-14 81.3 93 48.4
PGSC0003DMG400003052 Solanum tuberosum HOM05D008129 ORTHO05D010232 1.1e-13 80.5 83 51.8
Lalb_Chr09g0333221 Lupinus albus HOM05D008129 ORTHO05D010232 5.7e-13 78.2 92 44.6
Thecc.03G273100 Theobroma cacao HOM05D008129 ORTHO05D010232 5.7e-13 78.2 83 53.0
SGA_v2.0_scaffold385G50459 Striga asiatica HOM05D008129 ORTHO05D010232 7.4e-13 77.8 44 77.3
COL.COLO4_05253 Corchorus olitorius HOM05D008129 ORTHO05D010232 9.7e-13 77.4 79 53.2
Nitab4.5_0003924g0090 Nicotiana tabacum HOM05D008129 ORTHO05D010232 9.7e-13 77.4 83 50.6
MD00G1110200 Malus domestica HOM05D008129 ORTHO05D010232 2.8e-12 75.9 93 50.5
Medtr8g096860 Medicago truncatula HOM05D008129 ORTHO05D010232 2.8e-12 75.9 80 50.0
AUR62010633 Chenopodium quinoa HOM05D008129 ORTHO05D010232 3.7e-12 75.5 93 46.2
Gohir.D03G153100 Gossypium hirsutum HOM05D008129 ORTHO05D010232 3.7e-12 75.5 83 49.4
CiPaw.12G097000 Carya illinoinensis HOM05D008129 ORTHO05D010232 6.3e-12 74.7 90 46.7
FvH4_5g01760 Fragaria vesca HOM05D008129 ORTHO05D010232 8.2e-12 74.3 87 50.6
FAN08G0538 Fragaria x ananassa HOM05D008129 ORTHO05D010232 8.2e-12 74.3 87 50.6
FAN18G4443 Fragaria x ananassa HOM05D008129 ORTHO05D010232 8.2e-12 74.3 87 50.6
Nn6g34205 Nelumbo nucifera HOM05D008129 ORTHO05D010232 8.2e-12 74.3 113 41.6
Haze_08930 Corylus avellana HOM05D008129 ORTHO05D010232 1.1e-11 73.9 84 47.6
FAN04G1130 Fragaria x ananassa HOM05D008129 ORTHO05D010232 1.1e-11 73.9 87 50.6
RcHm_v2.0_Chr7g0198961 Rosa chinensis HOM05D008129 ORTHO05D010232 1.1e-11 73.9 86 48.8
Cfa012120 Carpinus fangiana HOM05D008129 ORTHO05D010232 1.4e-11 73.6 85 48.2
FAN13G1875 Fragaria x ananassa HOM05D008129 ORTHO05D010232 1.4e-11 73.6 87 49.4
Ciclev10022388m.g Citrus clementina HOM05D008129 ORTHO05D010232 1.8e-11 73.2 79 53.2
TPR.G12796 Trifolium pratense HOM05D000268 ORTHO05D000261 2.4e-11 72.8 80 45.0
vmacro00355 Vaccinium macrocarpon HOM05D001075 ORTHO05D001779 3.1e-11 72.4 86 47.7
Gorai.003G160700 Gossypium raimondii HOM05D008129 ORTHO05D010232 7.0e-11 71.2 54 64.8
AUR62017276 Chenopodium quinoa HOM05D008129 ORTHO05D010232 9.1e-11 70.9 88 46.6
Solyc08g080530.1 Solanum lycopersicum HOM05D008129 ORTHO05D010232 9.1e-11 70.9 83 48.2
Gohir.A03G018500 Gossypium hirsutum HOM05D008129 ORTHO05D010232 1.6e-10 70.1 83 49.4
MD04G1064800 Malus domestica HOM05D008129 ORTHO05D010232 1.6e-10 70.1 62 58.1
QL12p017600 Quercus lobata HOM05D008129 ORTHO05D010232 2.0e-10 69.7 84 45.2
QL12p017610 Quercus lobata HOM05D008129 ORTHO05D010232 2.0e-10 69.7 84 45.2
Glyma.11G025800 Glycine max HOM05D008129 ORTHO05D010232 2.6e-10 69.3 100 43.0
Eucgr.D01909 Eucalyptus grandis HOM05D008129 ORTHO05D010232 3.5e-10 68.9 87 44.8
Prupe.5G093100 Prunus persica HOM05D008129 ORTHO05D010232 4.5e-10 68.6 56 58.9
Sabra01G0081800 Salix brachista HOM05D008129 ORTHO05D010232 5.9e-10 68.2 85 45.9
Psat7g036080 Pisum sativum HOM05D008129 ORTHO05D010232 1.7e-09 66.6 80 46.2
Phvul.002G155100 Phaseolus vulgaris HOM05D008129 ORTHO05D010232 2.2e-09 66.2 82 46.3
Manes.01G065300 Manihot esculenta HOM05D008129 ORTHO05D010232 6.5e-09 64.7 51 58.8
EL10Ac5g12748 Beta vulgaris HOM05D008129 ORTHO05D010232 1.1e-08 63.9 61 50.8
Phvul.002G286400 Phaseolus vulgaris HOM05D008129 ORTHO05D010232 1.1e-08 63.9 55 50.9
Potri.001G108300 Populus trichocarpa HOM05D008129 ORTHO05D010232 3.2e-08 62.4 84 42.9
VMungo1215G1765 Vigna mungo HOM05D008129 ORTHO05D010232 3.2e-08 62.4 101 37.6
CiPaw.11G139400 Carya illinoinensis HOM05D008129 ORTHO05D010232 4.2e-08 62.0 83 44.6
COL.COLO4_05254 Corchorus olitorius HOM05D008129 ORTHO05D010232 7.2e-08 61.2 80 42.5
MBI12_g33658_MAGBIO Magnolia biondii HOM05D002113 ORTHO05D002124 1.6e-07 60.1 78 37.2
Oeu058608.1 Olea europaea HOM05D002113 ORTHO05D002124 1.6e-07 60.1 85 44.7
Lj2g0000650 Lotus japonicus HOM05D008129 ORTHO05D010232 3.6e-07 58.9 81 42.0
Eucgr.E00553 Eucalyptus grandis HOM05D008129 ORTHO05D010232 4.7e-07 58.5 50 50.0
MBI12_g42336_MAGBIO Magnolia biondii HOM05D002113 ORTHO05D002124 4.7e-07 58.5 75 40.0
Thecc.03G273000 Theobroma cacao HOM05D008129 ORTHO05D010232 4.7e-07 58.5 71 42.3
CsaV3_5G003170 Cucumis sativus L. HOM05D008129 ORTHO05D010232 6.1e-07 58.2 79 44.3
CAN.G981.9 Capsicum annuum HOM05D008129 ORTHO05D010232 1.8e-06 56.6 75 41.3
Prupe.2G157300 Prunus persica HOM05D002113 ORTHO05D002124 1.8e-06 56.6 51 51.0
PGR031G2634 Punica granatum HOM05D002113 ORTHO05D002124 1.8e-06 56.6 94 35.1
Sed0006885 Sechium edule HOM05D002113 ORTHO05D002124 1.8e-06 56.6 85 40.0
Sopen08g028850 Solanum pennellii HOM05D008129 ORTHO05D010232 1.8e-06 56.6 75 46.7
MELO3C005638.2 Cucumis melo HOM05D008129 ORTHO05D010232 5.2e-06 55.1 79 44.3
Eucgr.E00206 Eucalyptus grandis HOM05D002113 ORTHO05D002124 5.2e-06 55.1 86 36.0
Prupe.2G157400 Prunus persica HOM05D002113 ORTHO05D002124 5.2e-06 55.1 51 49.0
MBI12_g33479_MAGBIO Magnolia biondii HOM05D002113 ORTHO05D002124 6.7e-06 54.7 75 40.0
QL08p050151 Quercus lobata HOM05D002113 ORTHO05D002124 6.7e-06 54.7 52 46.2
Haze_15206 Corylus avellana HOM05D002113 ORTHO05D002124 8.8e-06 54.3 81 38.3
Gorai.003G160800 Gossypium raimondii HOM05D008129 ORTHO05D010232 8.8e-06 54.3 47 53.2
Lj9C578T12 Lonicera japonica HOM05D002113 ORTHO05D002124 8.8e-06 54.3 51 49.0


User provided reference genes

Program Settings