Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu062706.1 Olea europaea HOM05D003263 ORTHO05D004801 1.0e-171 606.7 309 100.0
Oeu030292.1 Olea europaea HOM05D003263 ORTHO05D004801 5.4e-149 531.2 309 85.8
MSTRG.3699 Avicennia marina HOM05D003263 ORTHO05D004801 7.3e-138 494.2 307 80.5
MSTRG.15657 Avicennia marina HOM05D003263 ORTHO05D004801 3.4e-135 485.3 307 78.2
SalBow5G3125 Salvia bowleyana HOM05D003263 ORTHO05D004801 5.4e-133 478.0 307 77.9
Dinv19049 Davidia involucrata HOM05D003263 ORTHO05D004801 2.1e-132 476.1 305 78.0
Peaxi162Scf00464g00325 Petunia axillaris HOM05D003263 ORTHO05D004801 6.0e-132 474.6 307 76.5
Cc07_g13220 Coffea canephora HOM05D003263 ORTHO05D004801 1.3e-131 473.4 309 76.4
Nitab4.5_0011135g0010 Nicotiana tabacum HOM05D003263 ORTHO05D004801 1.3e-131 473.4 307 76.2
Ciclev10019002m.g Citrus clementina HOM05D003263 ORTHO05D004801 3.0e-131 472.2 307 76.2
Haze_14285 Corylus avellana HOM05D003263 ORTHO05D004801 5.1e-131 471.5 309 75.7
Solyc11g011470.2 Solanum lycopersicum HOM05D003263 ORTHO05D004801 6.6e-131 471.1 305 75.7
Cfa007786 Carpinus fangiana HOM05D003263 ORTHO05D004801 8.6e-131 470.7 309 75.4
CAN.G222.62 Capsicum annuum HOM05D003263 ORTHO05D004801 1.1e-130 470.3 305 76.1
Actinidia35722 Actinidia chinensis HOM05D003263 ORTHO05D004801 1.5e-130 469.9 309 75.1
Sopen11g006260 Solanum pennellii HOM05D003263 ORTHO05D004801 1.9e-130 469.5 305 75.4
TAR629G0765 Trochodendron aralioides HOM05D003263 ORTHO05D004801 2.5e-130 469.2 309 76.1
SGA_v2.0_scaffold2G00947 Striga asiatica HOM05D003263 ORTHO05D004801 4.3e-130 468.4 308 75.3
Prupe.3G165400 Prunus persica HOM05D003263 ORTHO05D004801 1.2e-129 466.8 307 76.2
unitig_748.g8633 Utricularia gibba HOM05D003263 ORTHO05D004801 2.1e-129 466.1 306 74.5
MD09G1268900 Malus domestica HOM05D003263 ORTHO05D004801 3.6e-129 465.3 307 75.6
Potri.017G136133 Populus trichocarpa HOM05D003263 ORTHO05D004801 3.6e-129 465.3 309 73.8
PGSC0003DMG400013309 Solanum tuberosum HOM05D003263 ORTHO05D004801 3.6e-129 465.3 305 75.1
Potri.004G082800 Populus trichocarpa HOM05D003263 ORTHO05D004801 6.2e-129 464.5 309 73.8
CSS0018871 Camellia sinensis var. sinensis HOM05D003263 ORTHO05D004801 1.1e-128 463.8 309 75.1
CsaV3_3G017880 Cucumis sativus L. HOM05D003263 ORTHO05D004801 1.1e-128 463.8 309 74.8
ClCG05G010610 Citrullus lanatus HOM05D003263 ORTHO05D004801 1.4e-128 463.4 309 74.8
Sed0016313 Sechium edule HOM05D003263 ORTHO05D004801 1.8e-128 463.0 309 74.1
Migut.K00926 Erythranthe guttata HOM05D003263 ORTHO05D004801 2.4e-128 462.6 308 75.3
TWI74G0116 Tripterygium wilfordii HOM05D003263 ORTHO05D004801 4.0e-128 461.8 309 74.8
MD17G1267300 Malus domestica HOM05D003263 ORTHO05D004801 6.8e-128 461.1 307 74.6
TWI77G0544 Tripterygium wilfordii HOM05D003263 ORTHO05D004801 6.8e-128 461.1 309 74.8
Atru.chr1.2038 Acer truncatum HOM05D003263 ORTHO05D004801 8.9e-128 460.7 309 74.4
Gohir.A07G176600 Gossypium hirsutum HOM05D003263 ORTHO05D004801 8.9e-128 460.7 309 74.4
QL02p059434 Quercus lobata HOM05D003263 ORTHO05D004801 8.9e-128 460.7 308 73.4
CiPaw.03G074100 Carya illinoinensis HOM05D003263 ORTHO05D004801 2.0e-127 459.5 309 74.4
Rhsim08G0019700 Rhododendron simsii HOM05D003263 ORTHO05D004801 2.6e-127 459.1 307 74.9
Gorai.001G204300 Gossypium raimondii HOM05D003263 ORTHO05D004801 5.8e-127 458.0 309 74.4
Duzib138G0925 Durio zibethinus HOM05D003263 ORTHO05D004801 7.6e-127 457.6 309 73.8
Gohir.D07G183900 Gossypium hirsutum HOM05D003263 ORTHO05D004801 1.7e-126 456.4 309 73.8
Eucgr.J01621 Eucalyptus grandis HOM05D003263 ORTHO05D004801 2.2e-126 456.1 309 72.2
COL.COLO4_13315 Corchorus olitorius HOM05D003263 ORTHO05D004801 2.9e-126 455.7 309 72.8
Thecc.04G063600 Theobroma cacao HOM05D003263 ORTHO05D004801 2.9e-126 455.7 309 73.8
MELO3C020331.2 Cucumis melo HOM05D003263 ORTHO05D004801 3.8e-126 455.3 309 73.5
Sed0005557 Sechium edule HOM05D003263 ORTHO05D004801 3.8e-126 455.3 309 73.5
Lj6g0025109 Lotus japonicus HOM05D003263 ORTHO05D004801 6.4e-126 454.5 309 72.2
Cpa.g.sc116.77 Carica papaya HOM05D003263 ORTHO05D004801 1.1e-125 453.8 309 72.2
Glyma.18G041700 Glycine max HOM05D003263 ORTHO05D004801 1.1e-125 453.8 305 72.8
PGR042G3530 Punica granatum HOM05D003263 ORTHO05D004801 1.4e-125 453.4 307 72.6
Duzib133G1400 Durio zibethinus HOM05D003263 ORTHO05D004801 1.9e-125 453.0 310 72.9
Manes.01G120700 Manihot esculenta HOM05D003263 ORTHO05D004801 3.2e-125 452.2 309 72.5
Os03g0713400 Oryza sativa ssp. japonica HOM05D003263 ORTHO05D004801 3.2e-125 452.2 309 71.2
CANSAT56G4352 Cannabis sativa HOM05D003263 ORTHO05D004801 5.4e-125 451.4 307 73.6
VMungo1383G2082 Vigna mungo HOM05D003263 ORTHO05D004801 5.4e-125 451.4 309 71.5
HanXRQChr07g0191741 Helianthus annuus HOM05D003263 ORTHO05D004801 7.1e-125 451.1 306 73.9
Phvul.001G229000 Phaseolus vulgaris HOM05D003263 ORTHO05D004801 7.1e-125 451.1 309 71.8
Glyma.11G214800 Glycine max HOM05D003263 ORTHO05D004801 9.3e-125 450.7 307 72.3
Aqoxy3G04075 Aquilegia oxysepala HOM05D003263 ORTHO05D004801 1.6e-124 449.9 308 74.0
PSO017G4553 Papaver somniferum HOM05D003263 ORTHO05D004801 2.1e-124 449.5 309 71.8
Zm00001eb055050 Zea mays HOM05D003263 ORTHO05D004801 2.1e-124 449.5 309 71.2
Zm00001eb216210 Zea mays HOM05D003263 ORTHO05D004801 2.1e-124 449.5 309 70.9
arahy.Tifrunner.gnm1.ann1.AUXW6G Arachis hypogaea HOM05D003263 ORTHO05D004801 2.7e-124 449.1 307 71.3
arahy.Tifrunner.gnm1.ann1.ZZ0CH2 Arachis hypogaea HOM05D003263 ORTHO05D004801 2.7e-124 449.1 301 72.4
FAN23G0774 Fragaria x ananassa HOM05D003263 ORTHO05D004801 2.7e-124 449.1 305 73.1
Medtr3g065130 Medicago truncatula HOM05D003263 ORTHO05D004801 2.7e-124 449.1 307 72.3
PSO478G1645 Papaver somniferum HOM05D003263 ORTHO05D004801 2.7e-124 449.1 309 71.5
RcHm_v2.0_Chr3g0491991 Rosa chinensis HOM05D003263 ORTHO05D004801 2.7e-124 449.1 307 72.3
ECA238G3173 Erigeron canadensis HOM05D003263 ORTHO05D004801 4.6e-124 448.4 306 72.5
FvH4_1g30070 Fragaria vesca HOM05D003263 ORTHO05D004801 4.6e-124 448.4 307 72.6
FAN26G0816 Fragaria x ananassa HOM05D003263 ORTHO05D004801 4.6e-124 448.4 307 72.3
Manes.02G078500 Manihot esculenta HOM05D003263 ORTHO05D004801 6.0e-124 448.0 309 71.8
Psat5g119880 Pisum sativum HOM05D003263 ORTHO05D004801 6.0e-124 448.0 307 71.7
MBI19_g09384_MAGBIO Magnolia biondii HOM05D003263 ORTHO05D004801 7.8e-124 447.6 307 72.3
DCAR_014159 Daucus carota HOM05D003263 ORTHO05D004801 1.0e-123 447.2 309 71.2
FAN19G0316 Fragaria x ananassa HOM05D003263 ORTHO05D004801 1.0e-123 447.2 307 72.3
CDE05G1041 Ceratophyllum demersum HOM05D003263 ORTHO05D004801 5.1e-123 444.9 309 70.6
AUR62037782 Chenopodium quinoa HOM05D003263 ORTHO05D004801 5.1e-123 444.9 309 71.8
Lalb_Chr18g0053541 Lupinus albus HOM05D003263 ORTHO05D004801 8.7e-123 444.1 309 70.6
Ah.10g032480 Amaranthus hybridus HOM05D003263 ORTHO05D004801 2.5e-122 442.6 309 71.2
AUR62042225 Chenopodium quinoa HOM05D003263 ORTHO05D004801 3.3e-122 442.2 309 71.5
Sc14g0006900 Simmondsia chinensis HOM05D003263 ORTHO05D004801 5.6e-122 441.4 307 71.0
Ca_17086_v3 Cicer arietinum L. HOM05D003263 ORTHO05D004801 7.3e-122 441.0 307 70.4
Hund13092 Selenicereus undatus HOM05D003263 ORTHO05D004801 7.3e-122 441.0 307 70.4
TPR.G23206 Trifolium pratense HOM05D003263 ORTHO05D004801 7.3e-122 441.0 307 71.3
Ah.10g032470 Amaranthus hybridus HOM05D003263 ORTHO05D004801 2.1e-121 439.5 303 71.6
EL10Ac2g03207 Beta vulgaris HOM05D003263 ORTHO05D004801 2.1e-121 439.5 309 71.2
HanXRQChr14g0444641 Helianthus annuus HOM05D003263 ORTHO05D004801 2.1e-121 439.5 306 71.6
Lalb_Chr15g0085021 Lupinus albus HOM05D003263 ORTHO05D004801 3.1e-120 435.6 309 69.3
Gohir.A07G170100 Gossypium hirsutum HOM05D003263 ORTHO05D004801 5.3e-120 434.9 309 70.2
Gorai.001G197100 Gossypium raimondii HOM05D003263 ORTHO05D004801 6.9e-120 434.5 309 69.6
Gohir.D07G176300 Gossypium hirsutum HOM05D003263 ORTHO05D004801 4.4e-119 431.8 309 69.6
SGA_v2.0_scaffold108G30966 Striga asiatica HOM05D003263 ORTHO05D004801 7.6e-119 431.0 280 74.6
A04p10660 Brassica napus HOM05D003263 ORTHO05D004801 1.7e-118 429.9 309 68.3
BcaB06g27086 Brassica carinata HOM05D003263 ORTHO05D004801 3.8e-118 428.7 309 68.0
Migut.H02232 Erythranthe guttata HOM05D003263 ORTHO05D004801 3.8e-118 428.7 311 71.1
C04p44380 Brassica napus HOM05D003263 ORTHO05D004801 4.9e-118 428.3 309 68.0
BcaC02g09578 Brassica carinata HOM05D003263 ORTHO05D004801 1.1e-117 427.2 309 67.6
BolC4t26009H Brassica oleracea HOM05D003263 ORTHO05D004801 1.1e-117 427.2 309 67.6
BraA04t16733Z Brassica rapa HOM05D003263 ORTHO05D004801 1.1e-117 427.2 309 67.6
Aa31LG9G17520 Aethionema arabicum HOM05D003263 ORTHO05D004801 1.9e-117 426.4 309 67.0
CARHR215400 Cardamine hirsuta HOM05D003263 ORTHO05D004801 1.9e-117 426.4 308 66.9
Aa31LG9G17530 Aethionema arabicum HOM05D003263 ORTHO05D004801 5.4e-117 424.9 309 66.7
Carub.0007s3268 Capsella rubella HOM05D003263 ORTHO05D004801 7.1e-117 424.5 309 66.3
AT5G37510 Arabidopsis thaliana HOM05D003263 ORTHO05D004801 9.3e-117 424.1 309 66.7
AL7G46270 Arabidopsis lyrata HOM05D003263 ORTHO05D004801 2.3e-115 419.5 302 67.5
AL1G43210 Arabidopsis lyrata HOM05D003263 ORTHO05D004801 3.0e-115 419.1 309 66.0
THA.LOC104805635 Tarenaya hassleriana HOM05D003263 ORTHO05D004801 3.0e-115 419.1 311 67.5
THA.LOC104822242 Tarenaya hassleriana HOM05D003263 ORTHO05D004801 3.0e-115 419.1 310 66.8
Thhalv10027640m.g Eutrema salsugineum HOM05D003263 ORTHO05D004801 8.7e-115 417.5 309 66.0
HPP92_020298 Vanilla planifolia HOM05D003263 ORTHO05D004801 3.6e-113 412.1 309 66.7
Lsat_1_v5_gn_3_63961 Lactuca sativa HOM05D003263 ORTHO05D004801 8.1e-113 411.0 308 66.6
SHI30113 Sapria himalayana HOM05D003263 ORTHO05D004801 3.1e-112 409.1 302 67.9
SpUn1854_0010 Schrenkiella parvula HOM05D003263 ORTHO05D004801 2.0e-111 406.4 295 66.8
CDE05G1320 Ceratophyllum demersum HOM05D003263 ORTHO05D004801 2.6e-111 406.0 309 66.3
GSVIVG01030914001 Vitis vinifera HOM05D003263 ORTHO05D004801 1.2e-108 397.1 309 67.0
ATR0118G003 Amborella trichopoda HOM05D003263 ORTHO05D004801 1.0e-99 367.5 310 58.7
Nitab4.5_0006562g0010 Nicotiana tabacum HOM05D003263 ORTHO05D004801 1.9e-98 363.2 230 76.5
SMO331G0029 Selaginella moellendorffii HOM05D003263 ORTHO05D004801 2.6e-95 352.8 308 53.9
arahy.Tifrunner.gnm1.ann1.HY7M04 Arachis hypogaea HOM05D000164 ORTHO05D004801 8.4e-94 347.8 243 69.5
Pp3c19_19270 Physcomitrium patens HOM05D003263 ORTHO05D004801 4.3e-90 335.5 306 54.2
Pp3c1_34100 Physcomitrium patens HOM05D003263 ORTHO05D004801 4.3e-90 335.5 306 54.6
Pp3c1_34110 Physcomitrium patens HOM05D003263 ORTHO05D004801 4.3e-90 335.5 306 54.6
AagrBONN_evm.TU.Sc2ySwM_228.2430 Anthoceros agrestis HOM05D003263 ORTHO05D004801 7.4e-90 334.7 310 53.5
Pp3c1_34140 Physcomitrium patens HOM05D003263 ORTHO05D004801 1.6e-89 333.6 306 54.2
vmacro18524 Vaccinium macrocarpon HOM05D003263 ORTHO05D004801 6.3e-89 331.6 225 73.3
Mapoly0153s0030 Marchantia polymorpha HOM05D003263 ORTHO05D004801 1.5e-87 327.0 310 53.2
CSS0049015 Camellia sinensis var. sinensis HOM05D003263 ORTHO05D004801 3.8e-86 322.4 299 60.2
CSS0039899 Camellia sinensis var. sinensis HOM05D003263 ORTHO05D004801 6.1e-84 315.1 298 59.4
Potri.017G136950 Populus trichocarpa HOM05D003263 ORTHO05D004801 1.7e-81 307.0 190 77.9
Dinv28178 Davidia involucrata HOM05D003263 ORTHO05D004801 6.3e-81 305.1 308 55.8
Oeu039332.1 Olea europaea HOM05D003263 ORTHO05D004801 1.4e-80 303.9 172 89.0
Nn4g24447 Nelumbo nucifera HOM05D003263 ORTHO05D004801 2.6e-79 299.7 190 76.8
TAR371G0371 Trochodendron aralioides HOM05D003263 ORTHO05D004801 7.4e-74 281.6 215 67.9
CBR_g6354 Chara braunii HOM05D003263 ORTHO05D004801 9.1e-72 274.6 310 45.2
arahy.Tifrunner.gnm1.ann1.5H82NF Arachis hypogaea HOM05D003263 ORTHO05D004801 5.2e-67 258.8 246 55.7
arahy.Tifrunner.gnm1.ann1.RIP12T Arachis hypogaea HOM05D003263 ORTHO05D004801 5.2e-67 258.8 246 55.7
Cre12.g535950 Chlamydomonas reinhardtii HOM05D003263 ORTHO05D004801 3.8e-62 242.7 312 39.4
MCO08G340 Micromonas commoda HOM05D003263 ORTHO05D004801 2.2e-57 226.9 312 38.8
Sabra17G0054900 Salix brachista HOM05D003263 ORTHO05D004801 1.1e-56 224.6 150 73.3
PRCOL_00000346 Prasinoderma coloniale HOM05D003263 ORTHO05D004801 7.0e-56 221.9 309 41.1
Cfa025667 Carpinus fangiana HOM05D003263 ORTHO05D004801 9.4e-53 211.5 311 38.9
Haze_27240 Corylus avellana HOM05D003263 ORTHO05D004801 1.3e-49 201.1 309 36.9
Thecc.K0008200 Theobroma cacao HOM05D003263 ORTHO05D004801 9.2e-48 194.9 126 75.4
Haze_26802 Corylus avellana HOM05D003263 ORTHO05D004801 5.7e-42 175.6 326 35.3
VMungo0647G1524 Vigna mungo HOM05D003263 ORTHO05D004801 1.4e-32 144.4 102 62.7
CBR_g44347 Chara braunii HOM05D003263 ORTHO05D004801 3.4e-26 123.2 142 44.4


User provided reference genes

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