Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu062661.1 Olea europaea HOM05D005481 ORTHO05D006779 4.9e-49 197.6 107 100.0
Dinv20536 Davidia involucrata HOM05D005481 ORTHO05D006779 7.1e-40 167.2 102 86.3
Actinidia20106 Actinidia chinensis HOM05D005481 ORTHO05D006779 2.1e-39 165.6 102 84.3
Hma1.2p1_0095F.1_g047500 Hydrangea macrophylla HOM05D005481 ORTHO05D006779 2.1e-39 165.6 102 85.3
TAR622G0189 Trochodendron aralioides HOM05D005481 ORTHO05D006779 2.1e-39 165.6 102 85.3
Atru.chr11.1002 Acer truncatum HOM05D005481 ORTHO05D006779 1.0e-38 163.3 103 85.4
Manes.15G138800 Manihot esculenta HOM05D005481 ORTHO05D006779 1.3e-38 162.9 102 84.3
Actinidia37496 Actinidia chinensis HOM05D005481 ORTHO05D006779 1.7e-38 162.5 102 82.4
Migut.E00569 Erythranthe guttata HOM05D005481 ORTHO05D006779 1.7e-38 162.5 102 83.3
Potri.008G139900 Populus trichocarpa HOM05D005481 ORTHO05D006779 1.7e-38 162.5 102 83.3
Rhsim09G0085400 Rhododendron simsii HOM05D005481 ORTHO05D006779 1.7e-38 162.5 102 80.4
PSO063G6983 Papaver somniferum HOM05D005481 ORTHO05D006779 2.3e-38 162.2 102 84.3
PSO782G1235 Papaver somniferum HOM05D005481 ORTHO05D006779 2.3e-38 162.2 102 84.3
Aqoxy3G04008 Aquilegia oxysepala HOM05D005481 ORTHO05D006779 5.1e-38 161.0 102 83.3
MSTRG.13650 Avicennia marina HOM05D005481 ORTHO05D006779 8.6e-38 160.2 102 83.3
Duzib251G0084 Durio zibethinus HOM05D005481 ORTHO05D006779 8.6e-38 160.2 103 81.6
Sabra08G0106000 Salix brachista HOM05D005481 ORTHO05D006779 1.1e-37 159.8 102 81.4
SalBow2G3020 Salvia bowleyana HOM05D005481 ORTHO05D006779 1.1e-37 159.8 102 82.4
Cc11_g05700 Coffea canephora HOM05D005481 ORTHO05D006779 1.5e-37 159.5 102 84.3
CSS0010274 Camellia sinensis var. sinensis HOM05D005481 ORTHO05D006779 2.5e-37 158.7 103 82.5
CSS0011982 Camellia sinensis var. sinensis HOM05D005481 ORTHO05D006779 2.5e-37 158.7 103 83.5
Nitab4.5_0000926g0040 Nicotiana tabacum HOM05D005481 ORTHO05D006779 4.3e-37 157.9 103 84.5
GSVIVG01011593001 Vitis vinifera HOM05D005481 ORTHO05D006779 4.3e-37 157.9 102 82.4
Duzib268G0472 Durio zibethinus HOM05D005481 ORTHO05D006779 5.6e-37 157.5 105 81.0
Gohir.A12G153800 Gossypium hirsutum HOM05D005481 ORTHO05D006779 7.3e-37 157.1 103 82.5
Gorai.008G169700 Gossypium raimondii HOM05D005481 ORTHO05D006779 7.3e-37 157.1 103 82.5
Nitab4.5_0007504g0030 Nicotiana tabacum HOM05D005481 ORTHO05D006779 1.2e-36 156.4 103 83.5
CAN.G966.8 Capsicum annuum HOM05D005481 ORTHO05D006779 1.6e-36 156.0 103 83.5
Gohir.D12G156900 Gossypium hirsutum HOM05D005481 ORTHO05D006779 2.1e-36 155.6 103 81.6
FvH4_4g26130 Fragaria vesca HOM05D005481 ORTHO05D006779 2.8e-36 155.2 103 80.6
FAN12G2411 Fragaria x ananassa HOM05D005481 ORTHO05D006779 2.8e-36 155.2 103 80.6
FAN12G2899 Fragaria x ananassa HOM05D005481 ORTHO05D006779 2.8e-36 155.2 103 80.6
QL03p039175 Quercus lobata HOM05D005481 ORTHO05D006779 2.8e-36 155.2 100 82.0
Solyc04g008340.2 Solanum lycopersicum HOM05D005481 ORTHO05D006779 2.8e-36 155.2 103 82.5
FAN07G1071 Fragaria x ananassa HOM05D005481 ORTHO05D006779 3.6e-36 154.8 103 79.6
FAN17G1043 Fragaria x ananassa HOM05D005481 ORTHO05D006779 3.6e-36 154.8 103 79.6
RcHm_v2.0_Chr4g0433701 Rosa chinensis HOM05D005481 ORTHO05D006779 3.6e-36 154.8 103 79.6
AT1G68100 Arabidopsis thaliana HOM05D005481 ORTHO05D006779 4.7e-36 154.5 103 78.6
Ciclev10018249m.g Citrus clementina HOM05D005481 ORTHO05D006779 4.7e-36 154.5 103 81.6
Lalb_Chr07g0187931 Lupinus albus HOM05D005481 ORTHO05D006779 4.7e-36 154.5 103 79.6
Peaxi162Scf00337g00010 Petunia axillaris HOM05D005481 ORTHO05D006779 4.7e-36 154.5 103 83.5
AUR62033487 Chenopodium quinoa HOM05D005481 ORTHO05D006779 6.2e-36 154.1 103 83.5
DCAR_002653 Daucus carota HOM05D005481 ORTHO05D006779 6.2e-36 154.1 102 82.4
CANSAT78G1557 Cannabis sativa HOM05D005481 ORTHO05D006779 8.1e-36 153.7 103 80.6
Sopen04g003490 Solanum pennellii HOM05D005481 ORTHO05D006779 8.1e-36 153.7 103 81.6
arahy.Tifrunner.gnm1.ann1.31BYXQ Arachis hypogaea HOM05D005481 ORTHO05D006779 1.1e-35 153.3 103 78.6
EL10Ac8g18625 Beta vulgaris HOM05D005481 ORTHO05D006779 1.4e-35 152.9 103 81.6
CDE05G2094 Ceratophyllum demersum HOM05D005481 ORTHO05D006779 1.4e-35 152.9 102 79.4
Thecc.02G303600 Theobroma cacao HOM05D005481 ORTHO05D006779 1.4e-35 152.9 103 81.6
Cfa022222 Carpinus fangiana HOM05D005481 ORTHO05D006779 1.8e-35 152.5 103 82.5
AL2G26810 Arabidopsis lyrata HOM05D005481 ORTHO05D006779 2.4e-35 152.1 103 77.7
BcaC08g45998 Brassica carinata HOM05D005481 ORTHO05D006779 2.4e-35 152.1 103 80.6
Glyma.08G092700 Glycine max HOM05D005481 ORTHO05D006779 2.4e-35 152.1 103 79.6
CiPaw.05G158800 Carya illinoinensis HOM05D005481 ORTHO05D006779 3.1e-35 151.8 103 78.6
Lj4g0017847 Lotus japonicus HOM05D005481 ORTHO05D006779 4.0e-35 151.4 103 78.6
Glyma.05G137400 Glycine max HOM05D005481 ORTHO05D006779 5.2e-35 151.0 103 78.6
BcaB03g15400 Brassica carinata HOM05D005481 ORTHO05D006779 6.9e-35 150.6 103 80.6
Carub.0002s1458 Capsella rubella HOM05D005481 ORTHO05D006779 6.9e-35 150.6 103 78.6
Prupe.1G338200 Prunus persica HOM05D005481 ORTHO05D006779 6.9e-35 150.6 103 77.7
THA.LOC104821909 Tarenaya hassleriana HOM05D005481 ORTHO05D006779 9.0e-35 150.2 103 77.7
TWI77G0967 Tripterygium wilfordii HOM05D005481 ORTHO05D006779 1.2e-34 149.8 103 77.7
ClCG11G000990 Citrullus lanatus HOM05D005481 ORTHO05D006779 1.5e-34 149.4 103 79.6
COL.COLO4_27578 Corchorus olitorius HOM05D005481 ORTHO05D006779 1.5e-34 149.4 103 80.6
Phvul.002G184200 Phaseolus vulgaris HOM05D005481 ORTHO05D006779 1.5e-34 149.4 103 79.6
Eucgr.G02069 Eucalyptus grandis HOM05D005481 ORTHO05D006779 2.0e-34 149.1 103 79.6
Thhalv10018501m.g Eutrema salsugineum HOM05D005481 ORTHO05D006779 2.0e-34 149.1 103 77.7
Ca_18192_v3 Cicer arietinum L. HOM05D005481 ORTHO05D006779 2.6e-34 148.7 103 75.7
Sp5g23100 Schrenkiella parvula HOM05D005481 ORTHO05D006779 2.6e-34 148.7 103 78.6
VMungo0251G3144 Vigna mungo HOM05D005481 ORTHO05D000001 2.6e-34 148.7 103 76.7
CDE05G3246 Ceratophyllum demersum HOM05D005481 ORTHO05D006779 3.4e-34 148.3 103 78.6
HanXRQChr17g0566271 Helianthus annuus HOM05D005481 ORTHO05D006779 3.4e-34 148.3 102 77.5
C06p37930 Brassica napus HOM05D005481 ORTHO05D006779 4.4e-34 147.9 103 78.6
MELO3C020059.2 Cucumis melo HOM05D005481 ORTHO05D006779 4.4e-34 147.9 103 79.6
TPR.G11925 Trifolium pratense HOM05D005481 ORTHO05D006779 4.4e-34 147.9 103 74.8
ATR0598G125 Amborella trichopoda HOM05D005481 ORTHO05D006779 5.8e-34 147.5 102 77.5
BcaC08g46237 Brassica carinata HOM05D005481 ORTHO05D006779 5.8e-34 147.5 104 76.0
C06p41930 Brassica napus HOM05D005481 ORTHO05D006779 5.8e-34 147.5 104 76.0
TWI74G0731 Tripterygium wilfordii HOM05D005481 ORTHO05D006779 5.8e-34 147.5 103 76.7
FAN22G2365 Fragaria x ananassa HOM05D005481 ORTHO05D006779 7.6e-34 147.1 109 74.3
MD13G1015600 Malus domestica HOM05D005481 ORTHO05D006779 7.6e-34 147.1 103 76.7
MD16G1013100 Malus domestica HOM05D005481 ORTHO05D006779 9.9e-34 146.7 103 76.7
BcaB03g15132 Brassica carinata HOM05D005481 ORTHO05D006779 1.3e-33 146.4 103 75.7
A07p34580 Brassica napus HOM05D005481 ORTHO05D006779 1.7e-33 146.0 104 75.0
CsaV3_5G012960 Cucumis sativus L. HOM05D005481 ORTHO05D006779 2.9e-33 145.2 103 78.6
Os08g0467400 Oryza sativa ssp. japonica HOM05D005481 ORTHO05D006779 2.9e-33 145.2 102 74.5
Sed0010601 Sechium edule HOM05D005481 ORTHO05D006779 4.9e-33 144.4 103 78.6
A07p32160 Brassica napus HOM05D005481 ORTHO05D006779 6.4e-33 144.1 117 71.8
BraA07t30846Z Brassica rapa HOM05D005481 ORTHO05D006779 6.4e-33 144.1 117 71.8
HPP92_005759 Vanilla planifolia HOM05D005481 ORTHO05D006779 1.9e-32 142.5 101 76.2
unitig_22.g5612 Utricularia gibba HOM05D005481 ORTHO05D006779 2.4e-32 142.1 102 75.5
CSS0044880 Camellia sinensis var. sinensis HOM05D005481 ORTHO05D006779 9.3e-32 140.2 119 70.6
ECA234G1527 Erigeron canadensis HOM05D005481 ORTHO05D006779 1.2e-31 139.8 88 83.0
SGA_v2.0_scaffold65G22147 Striga asiatica HOM05D005481 ORTHO05D006779 1.2e-31 139.8 102 74.5
Aa31LG9G8490 Aethionema arabicum HOM05D005481 ORTHO05D006779 7.8e-31 137.1 103 73.8
Cpa.g.sc326.1 Carica papaya HOM05D005481 ORTHO05D006779 1.7e-30 136.0 87 85.1
BolC6t38892H Brassica oleracea HOM05D005481 ORTHO05D006779 6.6e-30 134.0 103 73.8
MBI19_g01916_MAGBIO Magnolia biondii HOM05D005481 ORTHO05D006779 1.1e-29 133.3 80 83.8
BolC6t39238H Brassica oleracea HOM05D005481 ORTHO05D006779 1.3e-28 129.8 104 69.2
BraA07t31076Z Brassica rapa HOM05D005481 ORTHO05D006779 6.2e-28 127.5 104 68.3
Lsat_1_v5_gn_4_24241 Lactuca sativa HOM05D005481 ORTHO05D006779 6.2e-28 127.5 102 69.6
Haze_10808 Corylus avellana HOM05D005481 ORTHO05D006779 3.4e-26 121.7 77 87.0
Mapoly0096s0003 Marchantia polymorpha HOM05D005481 ORTHO05D006779 2.2e-25 119.0 102 63.7
Mapoly0096s0004 Marchantia polymorpha HOM05D005481 ORTHO05D006779 2.2e-25 119.0 102 63.7
SMO164G0085 Selaginella moellendorffii HOM05D005481 ORTHO05D006779 2.9e-25 118.6 102 61.8
SMO271G0121 Selaginella moellendorffii HOM05D005481 ORTHO05D006779 2.9e-25 118.6 102 61.8
Hund03668 Selenicereus undatus HOM05D005481 ORTHO05D006779 4.9e-25 117.9 103 70.9
AagrBONN_evm.TU.Sc2ySwM_368.3383 Anthoceros agrestis HOM05D005481 ORTHO05D006779 3.2e-24 115.2 102 60.8
AUR62011097 Chenopodium quinoa HOM05D005481 ORTHO05D006779 4.2e-24 114.8 135 56.3
Pp3c12_24640 Physcomitrium patens HOM05D005481 ORTHO05D006779 5.4e-24 114.4 102 59.8
BcaC08g45996 Brassica carinata HOM05D005481 ORTHO05D006779 5.6e-21 104.4 105 65.7
BcaB03g15126 Brassica carinata HOM05D005481 ORTHO05D006779 9.6e-21 103.6 103 62.1
BcaB03g15128 Brassica carinata HOM05D005481 ORTHO05D006779 9.6e-21 103.6 103 62.1
CSS0008657 Camellia sinensis var. sinensis HOM05D005481 ORTHO05D006779 1.3e-14 83.2 64 70.3
CARHR060770 Cardamine hirsuta HOM05D005481 ORTHO05D006779 3.0e-14 82.0 51 80.4
CSS0020286 Camellia sinensis var. sinensis HOM05D005481 ORTHO05D006779 3.9e-14 81.6 96 55.2
CSS0022702 Camellia sinensis var. sinensis HOM05D005481 ORTHO05D006779 7.6e-10 67.4 88 51.1
Sc10g0004950 Simmondsia chinensis HOM05D005481 ORTHO05D006779 2.2e-09 65.9 36 91.7
MCO07G486 Micromonas commoda HOM05D005481 ORTHO05D006779 6.5e-09 64.3 74 45.9


User provided reference genes

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