Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu062545.1 Olea europaea HOM05D001557 ORTHO05D001299 9.6e-46 186.4 91 100.0
Oeu052793.1 Olea europaea HOM05D001557 ORTHO05D001299 3.8e-26 121.3 94 66.0
Oeu052795.1 Olea europaea HOM05D001557 ORTHO05D001299 4.2e-25 117.9 94 64.9
Migut.M00883 Erythranthe guttata HOM05D001557 ORTHO05D001299 2.2e-21 105.5 94 56.4
Rhsim13G0117100 Rhododendron simsii HOM05D000055 ORTHO05D001299 1.2e-19 99.8 89 59.6
Aqoxy1G01661 Aquilegia oxysepala HOM05D001557 ORTHO05D001299 2.0e-19 99.0 94 57.4
MBI18_g11224_MAGBIO Magnolia biondii HOM05D001557 ORTHO05D001299 2.0e-19 99.0 94 56.4
Cc00_g02000 Coffea canephora HOM05D001557 ORTHO05D001299 3.4e-19 98.2 82 63.4
MSTRG.14787 Avicennia marina HOM05D001557 ORTHO05D001299 7.6e-19 97.1 83 60.2
Lalb_Chr08g0233421 Lupinus albus HOM05D001557 ORTHO05D001299 1.7e-18 95.9 94 53.2
Peaxi162Scf00465g00085 Petunia axillaris HOM05D001557 ORTHO05D001299 2.2e-18 95.5 94 56.4
SGA_v2.0_scaffold1G00203 Striga asiatica HOM05D001557 ORTHO05D001299 2.5e-17 92.0 94 47.9
Nitab4.5_0004752g0020 Nicotiana tabacum HOM05D001557 ORTHO05D001299 5.5e-17 90.9 92 54.3
CAN.G532.97 Capsicum annuum HOM05D001557 ORTHO05D001299 1.6e-16 89.4 82 56.1
Migut.H01349 Erythranthe guttata HOM05D001557 ORTHO05D001299 1.6e-16 89.4 83 60.2
Lj6g0003434 Lotus japonicus HOM05D001557 ORTHO05D001299 2.1e-16 89.0 82 59.8
Potri.011G081400 Populus trichocarpa HOM05D001557 ORTHO05D001299 6.1e-16 87.4 82 57.3
CSS0028734 Camellia sinensis var. sinensis HOM05D001557 ORTHO05D001299 1.0e-15 86.7 76 60.5
Nn3g20347 Nelumbo nucifera HOM05D001557 ORTHO05D001299 1.0e-15 86.7 83 56.6
Eucgr.E02434 Eucalyptus grandis HOM05D001557 ORTHO05D001299 1.4e-15 86.3 83 55.4
Nitab4.5_0001930g0010 Nicotiana tabacum HOM05D001557 ORTHO05D001299 1.4e-15 86.3 76 57.9
PGSC0003DMG400031337 Solanum tuberosum HOM05D001557 ORTHO05D001299 2.3e-15 85.5 73 60.3
PSO675G6798 Papaver somniferum HOM05D001557 ORTHO05D001299 3.0e-15 85.1 83 55.4
PSO541G4529 Papaver somniferum HOM05D001557 ORTHO05D001299 3.9e-15 84.7 83 54.2
Prupe.4G085200 Prunus persica HOM05D001557 ORTHO05D001299 3.9e-15 84.7 79 59.5
DCAR_027896 Daucus carota HOM05D001557 ORTHO05D001299 6.7e-15 84.0 76 59.2
Medtr2g049780 Medicago truncatula HOM05D001557 ORTHO05D001299 6.7e-15 84.0 83 54.2
CiPaw.09G120100 Carya illinoinensis HOM05D001557 ORTHO05D001299 8.8e-15 83.6 76 60.5
Cpa.g.sc139.30 Carica papaya HOM05D001557 ORTHO05D001299 1.1e-14 83.2 81 54.3
ClCG03G006520 Citrullus lanatus HOM05D001557 ORTHO05D001299 1.1e-14 83.2 76 55.3
CsaV3_1G036850 Cucumis sativus L. HOM05D001557 ORTHO05D001299 1.1e-14 83.2 76 55.3
Solyc02g021430.1 Solanum lycopersicum HOM05D001557 ORTHO05D001299 1.1e-14 83.2 76 56.6
Psat1g020760 Pisum sativum HOM05D001557 ORTHO05D001299 1.5e-14 82.8 83 53.0
MELO3C002768.2 Cucumis melo HOM05D001557 ORTHO05D001299 1.9e-14 82.4 76 55.3
Manes.15G124800 Manihot esculenta HOM05D001557 ORTHO05D001299 1.9e-14 82.4 73 60.3
PGR035G0001 Punica granatum HOM05D001557 ORTHO05D001299 1.9e-14 82.4 82 52.4
TAR627G0134 Trochodendron aralioides HOM05D002115 ORTHO05D002263 2.5e-14 82.0 76 59.2
Thecc.06G144900 Theobroma cacao HOM05D001557 ORTHO05D001299 3.3e-14 81.6 76 55.3
MD05G1280200 Malus domestica HOM05D001752 ORTHO05D003933 4.3e-14 81.3 82 56.1
Sed0018709 Sechium edule HOM05D001557 ORTHO05D001299 4.3e-14 81.3 75 56.0
Sopen02g005910 Solanum pennellii HOM05D001557 ORTHO05D001299 4.3e-14 81.3 76 55.3
Glyma.15G197200 Glycine max HOM05D001557 ORTHO05D001299 5.7e-14 80.9 82 52.4
Atru.chr10.1122 Acer truncatum HOM05D001557 ORTHO05D001299 9.7e-14 80.1 76 57.9
Hma1.2p1_0594F.1_g185980 Hydrangea macrophylla HOM05D001557 ORTHO05D001299 9.7e-14 80.1 73 60.3
CDE02G1714 Ceratophyllum demersum HOM05D001557 ORTHO05D001299 1.3e-13 79.7 76 55.3
Ciclev10016031m.g Citrus clementina HOM05D001557 ORTHO05D001299 2.2e-13 79.0 80 55.0
Duzib235G0753 Durio zibethinus HOM05D001557 ORTHO05D001299 4.8e-13 77.8 76 52.6
Glyma.09G089600 Glycine max HOM05D001557 ORTHO05D001299 4.8e-13 77.8 76 55.3
Sabra11G0065000 Salix brachista HOM05D001557 ORTHO05D001299 4.8e-13 77.8 73 57.5
QL05p055184 Quercus lobata HOM05D001557 ORTHO05D001299 6.3e-13 77.4 81 55.6
Ca_02599_v3 Cicer arietinum L. HOM05D001557 ORTHO05D001299 8.2e-13 77.0 83 53.0
Gohir.A10G043700 Gossypium hirsutum HOM05D001557 ORTHO05D001299 1.1e-12 76.6 76 53.9
MD10G1258500 Malus domestica HOM05D001752 ORTHO05D003933 1.4e-12 76.3 76 53.9
TPR.G21108 Trifolium pratense HOM05D001557 ORTHO05D001299 1.8e-12 75.9 83 49.4
EL10Ac8g19633 Beta vulgaris HOM05D001557 ORTHO05D001299 2.4e-12 75.5 79 51.9
Gohir.D10G045000 Gossypium hirsutum HOM05D001752 ORTHO05D003933 3.1e-12 75.1 76 52.6
Gorai.011G047900 Gossypium raimondii HOM05D001752 ORTHO05D003933 3.1e-12 75.1 76 52.6
VMungo1309G2939 Vigna mungo HOM05D001557 ORTHO05D001299 4.1e-12 74.7 76 52.6
Cfa008532 Carpinus fangiana HOM05D001557 ORTHO05D001299 9.1e-12 73.6 74 56.8
Lsat_1_v5_gn_7_27520 Lactuca sativa HOM05D001557 ORTHO05D001299 9.1e-12 73.6 76 53.9
AUR62002686 Chenopodium quinoa HOM05D001557 ORTHO05D001299 1.2e-11 73.2 76 51.3
Haze_11109 Corylus avellana HOM05D001557 ORTHO05D001299 1.5e-11 72.8 74 56.8
Phvul.009G213100 Phaseolus vulgaris HOM05D001557 ORTHO05D001299 2.6e-11 72.0 76 48.7
CANSAT35G0632 Cannabis sativa HOM05D001557 ORTHO05D001299 3.4e-11 71.6 76 52.6
RcHm_v2.0_Chr5g0014781 Rosa chinensis HOM05D001557 ORTHO05D001299 3.4e-11 71.6 76 52.6
AUR62030143 Chenopodium quinoa HOM05D001557 ORTHO05D001299 4.5e-11 71.2 76 50.0
FvH4_3g05090 Fragaria vesca HOM05D001557 ORTHO05D001299 4.5e-11 71.2 76 52.6
FAN11G2782 Fragaria x ananassa HOM05D001557 ORTHO05D001299 4.5e-11 71.2 76 52.6
FAN16G0497 Fragaria x ananassa HOM05D001557 ORTHO05D001299 4.5e-11 71.2 76 52.6
FAN21G3828 Fragaria x ananassa HOM05D002115 ORTHO05D002263 4.5e-11 71.2 76 52.6
HanXRQChr15g0482001 Helianthus annuus HOM05D001557 ORTHO05D001299 5.9e-11 70.9 76 55.3
Lalb_Chr11g0073211 Lupinus albus HOM05D001557 ORTHO05D001299 1.3e-10 69.7 71 52.1
PGR083G1691 Punica granatum HOM05D001557 ORTHO05D001299 2.2e-10 68.9 73 47.9
unitig_26.g8992 Utricularia gibba HOM05D001557 ORTHO05D001299 2.2e-10 68.9 76 46.1
BcaB02g09521 Brassica carinata HOM05D001557 ORTHO05D001299 2.9e-10 68.6 73 49.3
A05p11030 Brassica napus HOM05D001752 ORTHO05D003933 5.0e-10 67.8 74 47.3
TWI73G0282 Tripterygium wilfordii HOM05D001557 ORTHO05D001299 5.0e-10 67.8 71 53.5
BcaC02g11539 Brassica carinata HOM05D001752 ORTHO05D003933 6.5e-10 67.4 74 47.3
C04p14150 Brassica napus HOM05D001752 ORTHO05D003933 6.5e-10 67.4 74 47.3
BolC4t23004H Brassica oleracea HOM05D001557 ORTHO05D001299 6.5e-10 67.4 74 47.3
BraA05t20048Z Brassica rapa HOM05D001752 ORTHO05D003933 8.5e-10 67.0 74 47.3
Os03g0785200 Oryza sativa ssp. japonica HOM05D001557 ORTHO05D001299 1.1e-09 66.6 81 40.7
Carub.0004s1630 Capsella rubella HOM05D001557 ORTHO05D001299 1.4e-09 66.2 76 47.4
CDE08G0018 Ceratophyllum demersum HOM05D001557 ORTHO05D001299 1.4e-09 66.2 94 37.2
THA.LOC104812680 Tarenaya hassleriana HOM05D001557 ORTHO05D001299 1.4e-09 66.2 73 49.3
CARHR128720 Cardamine hirsuta HOM05D001557 ORTHO05D001299 1.9e-09 65.9 79 46.8
Aa31LG10G6730 Aethionema arabicum HOM05D001557 ORTHO05D001299 2.5e-09 65.5 73 47.9
FAN16G0528 Fragaria x ananassa HOM05D001557 ORTHO05D001299 2.5e-09 65.5 76 50.0
Sp4g16890 Schrenkiella parvula HOM05D001557 ORTHO05D001299 2.5e-09 65.5 72 48.6
Ah.09g232480 Amaranthus hybridus HOM05D001557 ORTHO05D001299 3.2e-09 65.1 70 50.0
AL270U10030 Arabidopsis lyrata HOM05D001557 ORTHO05D001299 5.5e-09 64.3 73 46.6
AL4G30610 Arabidopsis lyrata HOM05D001557 ORTHO05D001299 5.5e-09 64.3 73 46.6
Sc15g0001480 Simmondsia chinensis HOM05D004184 ORTHO05D004863 5.5e-09 64.3 81 40.7
Thhalv10016991m.g Eutrema salsugineum HOM05D001557 ORTHO05D001299 7.2e-09 63.9 73 47.9
ECA236G4296 Erigeron canadensis HOM05D001557 ORTHO05D001299 1.2e-08 63.2 77 49.4
AT2G34620 Arabidopsis thaliana HOM05D001557 ORTHO05D001299 2.1e-08 62.4 73 46.6
PSO832G2716 Papaver somniferum HOM05D001557 ORTHO05D001299 2.1e-08 62.4 94 36.2
ATR1098G094 Amborella trichopoda HOM05D001557 ORTHO05D001299 3.6e-08 61.6 74 45.9
SEGI_38269 Sequoiadendron giganteum HOM05D001557 ORTHO05D001299 4.7e-08 61.2 75 40.0
PSO013G0284 Papaver somniferum HOM05D001557 ORTHO05D001299 1.0e-07 60.1 94 35.1
Nn4g23205 Nelumbo nucifera HOM05D001557 ORTHO05D001299 1.8e-07 59.3 94 38.3
SEGI_01405 Sequoiadendron giganteum HOM05D001557 ORTHO05D001299 2.3e-07 58.9 75 41.3
PGR119G1320 Punica granatum HOM05D001557 ORTHO05D001299 3.0e-07 58.5 94 36.2
AUR62007047 Chenopodium quinoa HOM05D001557 ORTHO05D001299 5.1e-07 57.8 92 34.8
ATR0730G079 Amborella trichopoda HOM05D001557 ORTHO05D001299 8.8e-07 57.0 58 41.4
AUR62019911 Chenopodium quinoa HOM05D001557 ORTHO05D001299 1.1e-06 56.6 92 34.8
Manes.01G034700 Manihot esculenta HOM05D001557 ORTHO05D001299 1.1e-06 56.6 92 32.6
HPP92_000997 Vanilla planifolia HOM05D001557 ORTHO05D001299 1.1e-06 56.6 73 42.5
unitig_749.g14107 Utricularia gibba HOM05D001557 ORTHO05D001299 1.5e-06 56.2 60 48.3
Sc04g0008000 Simmondsia chinensis HOM05D001557 ORTHO05D001299 2.0e-06 55.8 65 43.1
Cfa008965 Carpinus fangiana HOM05D001557 ORTHO05D001299 2.6e-06 55.5 94 37.2
Lalb_Chr17g0340801 Lupinus albus HOM05D001557 ORTHO05D001299 2.6e-06 55.5 76 35.5
Ah.12g053170 Amaranthus hybridus HOM05D001557 ORTHO05D001299 3.3e-06 55.1 86 37.2
Haze_11996 Corylus avellana HOM05D001557 ORTHO05D001299 4.4e-06 54.7 94 37.2
TAR371G0335 Trochodendron aralioides HOM05D001557 ORTHO05D001299 5.7e-06 54.3 60 43.3
CiPaw.06G086600 Carya illinoinensis HOM05D001557 ORTHO05D001299 7.4e-06 53.9 94 33.0
Rhsim05G0186700 Rhododendron simsii HOM05D001557 ORTHO05D001299 7.4e-06 53.9 60 41.7


User provided reference genes

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