Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu062544.1 Olea europaea HOM05D005652 ORTHO05D007300 1.3e-38 162.5 81 100.0
Oeu026729.1 Olea europaea HOM05D005652 ORTHO05D007300 1.6e-23 112.5 69 87.0
QL09p036189 Quercus lobata HOM05D005652 ORTHO05D007300 1.5e-21 105.9 69 79.7
Atru.chr13.1343 Acer truncatum HOM05D005652 ORTHO05D007300 2.8e-20 101.7 62 87.1
arahy.Tifrunner.gnm1.ann1.AJPJ4J Arachis hypogaea HOM05D005652 ORTHO05D007300 2.8e-20 101.7 62 87.1
MSTRG.1473 Avicennia marina HOM05D005652 ORTHO05D007300 2.8e-20 101.7 62 87.1
MSTRG.22423 Avicennia marina HOM05D005652 ORTHO05D007300 2.8e-20 101.7 62 87.1
CSS0012578 Camellia sinensis var. sinensis HOM05D005652 ORTHO05D007300 2.8e-20 101.7 62 87.1
CANSAT54G2625 Cannabis sativa HOM05D005652 ORTHO05D007300 2.8e-20 101.7 62 87.1
CAN.G1483.5 Capsicum annuum HOM05D005652 ORTHO05D007300 2.8e-20 101.7 62 87.1
CiPaw.05G226800 Carya illinoinensis HOM05D005652 ORTHO05D007300 2.8e-20 101.7 62 87.1
CDE06G1598 Ceratophyllum demersum HOM05D005652 ORTHO05D007300 2.8e-20 101.7 62 87.1
CDE08G1473 Ceratophyllum demersum HOM05D005652 ORTHO05D007300 2.8e-20 101.7 62 87.1
Ca_19025_v3 Cicer arietinum L. HOM05D005652 ORTHO05D007300 2.8e-20 101.7 62 87.1
Ca_26775_v3 Cicer arietinum L. HOM05D005652 ORTHO05D007300 2.8e-20 101.7 62 87.1
ClCG03G009400 Citrullus lanatus HOM05D005652 ORTHO05D007300 2.8e-20 101.7 62 87.1
Ciclev10002945m.g Citrus clementina HOM05D005652 ORTHO05D007300 2.8e-20 101.7 62 87.1
Cc06_g19090 Coffea canephora HOM05D005652 ORTHO05D007300 2.8e-20 101.7 62 87.1
Haze_00495 Corylus avellana HOM05D000102 ORTHO05D003793 2.8e-20 101.7 62 87.1
MELO3C003038.2 Cucumis melo HOM05D005652 ORTHO05D007300 2.8e-20 101.7 62 87.1
CsaV3_5G023210 Cucumis sativus L. HOM05D005652 ORTHO05D007300 2.8e-20 101.7 62 87.1
Dinv27358 Davidia involucrata HOM05D005652 ORTHO05D007300 2.8e-20 101.7 62 87.1
Duzib041G0199 Durio zibethinus HOM05D005652 ORTHO05D007300 2.8e-20 101.7 62 87.1
Duzib093G1773 Durio zibethinus HOM05D005652 ORTHO05D007300 2.8e-20 101.7 62 87.1
Eucgr.F03755 Eucalyptus grandis HOM05D005652 ORTHO05D007300 2.8e-20 101.7 62 87.1
FvH4_2g26390 Fragaria vesca HOM05D005652 ORTHO05D007300 2.8e-20 101.7 62 87.1
FAN20G1151 Fragaria x ananassa HOM05D005652 ORTHO05D007300 2.8e-20 101.7 62 87.1
FAN24G1202 Fragaria x ananassa HOM05D000102 ORTHO05D003793 2.8e-20 101.7 62 87.1
FAN27G1241 Fragaria x ananassa HOM05D005652 ORTHO05D007300 2.8e-20 101.7 62 87.1
Glyma.04G252400 Glycine max HOM05D005652 ORTHO05D007300 2.8e-20 101.7 62 87.1
Glyma.06G110100 Glycine max HOM05D005652 ORTHO05D007300 2.8e-20 101.7 62 87.1
Glyma.14G163800 Glycine max HOM05D005652 ORTHO05D007300 2.8e-20 101.7 62 87.1
Gohir.A02G074200 Gossypium hirsutum HOM05D005652 ORTHO05D007300 2.8e-20 101.7 62 87.1
Gohir.A06G041900 Gossypium hirsutum HOM05D005652 ORTHO05D007300 2.8e-20 101.7 62 87.1
Gohir.D06G042900 Gossypium hirsutum HOM05D005652 ORTHO05D007300 2.8e-20 101.7 62 87.1
Gorai.005G091100 Gossypium raimondii HOM05D005652 ORTHO05D007300 2.8e-20 101.7 62 87.1
Gorai.010G048100 Gossypium raimondii HOM05D005652 ORTHO05D007300 2.8e-20 101.7 62 87.1
Hma1.2p1_0009F.1_g006210 Hydrangea macrophylla HOM05D005652 ORTHO05D007300 2.8e-20 101.7 62 87.1
Lj1g0016776 Lotus japonicus HOM05D005652 ORTHO05D007300 2.8e-20 101.7 62 87.1
Lalb_Chr08g0241571 Lupinus albus HOM05D005652 ORTHO05D007300 2.8e-20 101.7 62 87.1
Lalb_Chr23g0270881 Lupinus albus HOM05D005652 ORTHO05D007300 2.8e-20 101.7 62 87.1
MD08G1169400 Malus domestica HOM05D005652 ORTHO05D007300 2.8e-20 101.7 62 87.1
MD15G1356000 Malus domestica HOM05D005652 ORTHO05D007300 2.8e-20 101.7 62 87.1
Manes.18G074500 Manihot esculenta HOM05D005652 ORTHO05D007300 2.8e-20 101.7 62 87.1
Medtr5g059210 Medicago truncatula HOM05D005652 ORTHO05D007300 2.8e-20 101.7 62 87.1
Nn5g28127 Nelumbo nucifera HOM05D005652 ORTHO05D007300 2.8e-20 101.7 62 87.1
Nitab4.5_0000030g0080 Nicotiana tabacum HOM05D005652 ORTHO05D007300 2.8e-20 101.7 62 87.1
Nitab4.5_0000943g0120 Nicotiana tabacum HOM05D005652 ORTHO05D007300 2.8e-20 101.7 62 87.1
Nitab4.5_0014082g0020 Nicotiana tabacum HOM05D005652 ORTHO05D007300 2.8e-20 101.7 62 87.1
Oeu050889.1 Olea europaea HOM05D005652 ORTHO05D007300 2.8e-20 101.7 62 87.1
Peaxi162Scf00408g00839 Petunia axillaris HOM05D005652 ORTHO05D007300 2.8e-20 101.7 62 87.1
Peaxi162Scf00876g00433 Petunia axillaris HOM05D005652 ORTHO05D007300 2.8e-20 101.7 62 87.1
Phvul.009G121900 Phaseolus vulgaris HOM05D005652 ORTHO05D007300 2.8e-20 101.7 62 87.1
Psat2g096080 Pisum sativum HOM05D005652 ORTHO05D007300 2.8e-20 101.7 62 87.1
Potri.002G087200 Populus trichocarpa HOM05D005652 ORTHO05D007300 2.8e-20 101.7 62 87.1
Potri.005G173800 Populus trichocarpa HOM05D005652 ORTHO05D007300 2.8e-20 101.7 62 87.1
PGR042G1865 Punica granatum HOM05D005652 ORTHO05D007300 2.8e-20 101.7 62 87.1
RcHm_v2.0_Chr6g0294951 Rosa chinensis HOM05D005652 ORTHO05D007300 2.8e-20 101.7 62 87.1
Sabra02G0068700 Salix brachista HOM05D005652 ORTHO05D007300 2.8e-20 101.7 62 87.1
SalBow7G3105 Salvia bowleyana HOM05D005652 ORTHO05D007300 2.8e-20 101.7 62 87.1
Sed0000902 Sechium edule HOM05D005652 ORTHO05D007300 2.8e-20 101.7 62 87.1
Solyc08g075780.4 Solanum lycopersicum HOM05D005652 ORTHO05D007300 2.8e-20 101.7 62 87.1
Solyc12g096120.2 Solanum lycopersicum HOM05D005652 ORTHO05D007300 2.8e-20 101.7 62 87.1
Sopen12g032000 Solanum pennellii HOM05D005652 ORTHO05D007300 2.8e-20 101.7 62 87.1
PGSC0003DMG400029291 Solanum tuberosum HOM05D005652 ORTHO05D007300 2.8e-20 101.7 62 87.1
PGSC0003DMG400030853 Solanum tuberosum HOM05D005652 ORTHO05D007300 2.8e-20 101.7 62 87.1
SGA_v2.0_scaffold24G10489 Striga asiatica HOM05D005652 ORTHO05D007300 2.8e-20 101.7 62 87.1
THA.LOC104813142 Tarenaya hassleriana HOM05D005652 ORTHO05D007300 2.8e-20 101.7 62 87.1
THA.LOC104817112 Tarenaya hassleriana HOM05D005652 ORTHO05D007300 2.8e-20 101.7 62 87.1
Thecc.08G119900 Theobroma cacao HOM05D005652 ORTHO05D007300 2.8e-20 101.7 62 87.1
TPR.G8501 Trifolium pratense HOM05D005652 ORTHO05D007300 2.8e-20 101.7 62 87.1
TWI12G1472 Tripterygium wilfordii HOM05D005652 ORTHO05D007300 2.8e-20 101.7 62 87.1
TWI56G0667 Tripterygium wilfordii HOM05D005652 ORTHO05D007300 2.8e-20 101.7 62 87.1
GSVIVG01008919001 Vitis vinifera HOM05D005652 ORTHO05D007300 2.8e-20 101.7 62 87.1
Pp3c6_16720 Physcomitrium patens HOM05D005652 ORTHO05D007300 3.6e-20 101.3 66 81.8
Hund16832 Selenicereus undatus HOM05D005652 ORTHO05D007300 3.6e-20 101.3 62 85.5
Hund27043 Selenicereus undatus HOM05D005652 ORTHO05D007300 3.6e-20 101.3 62 85.5
Aqoxy6G01736 Aquilegia oxysepala HOM05D005652 ORTHO05D007300 6.2e-20 100.5 62 85.5
Nitab4.5_0013867g0020 Nicotiana tabacum HOM05D005652 ORTHO05D007300 6.2e-20 100.5 62 85.5
Oeu050252.1 Olea europaea HOM05D005652 ORTHO05D007300 6.2e-20 100.5 62 85.5
Prupe.1G503300 Prunus persica HOM05D005652 ORTHO05D007300 6.2e-20 100.5 62 85.5
Sc23g0000830 Simmondsia chinensis HOM05D005652 ORTHO05D007300 6.2e-20 100.5 62 85.5
TAR376G0464 Trochodendron aralioides HOM05D005652 ORTHO05D007300 6.2e-20 100.5 62 85.5
ECA238G1260 Erigeron canadensis HOM05D005652 ORTHO05D007300 8.0e-20 100.1 62 85.5
HanXRQChr14g0432351 Helianthus annuus HOM05D005652 ORTHO05D007300 8.0e-20 100.1 62 85.5
MBI09_g06382_MAGBIO Magnolia biondii HOM05D005652 ORTHO05D007300 8.0e-20 100.1 62 85.5
Aa31LG4G7830 Aethionema arabicum HOM05D005652 ORTHO05D007300 1.1e-19 99.8 62 83.9
ATR0041G005 Amborella trichopoda HOM05D005652 ORTHO05D007300 1.1e-19 99.8 62 85.5
AL2G37930 Arabidopsis lyrata HOM05D005652 ORTHO05D007300 1.1e-19 99.8 62 83.9
AT1G77710 Arabidopsis thaliana HOM05D005652 ORTHO05D007300 1.1e-19 99.8 62 83.9
BcaB02g07127 Brassica carinata HOM05D005652 ORTHO05D007300 1.1e-19 99.8 62 83.9
BcaB05g25069 Brassica carinata HOM05D005652 ORTHO05D007300 1.1e-19 99.8 62 83.9
BcaC03g15763 Brassica carinata HOM05D005652 ORTHO05D007300 1.1e-19 99.8 62 83.9
BcaC08g45458 Brassica carinata HOM05D005652 ORTHO05D007300 1.1e-19 99.8 62 83.9
A07p27870 Brassica napus HOM05D005652 ORTHO05D007300 1.1e-19 99.8 62 83.9
C06p30860 Brassica napus HOM05D005652 ORTHO05D007300 1.1e-19 99.8 62 83.9
BolC6t38248H Brassica oleracea HOM05D005652 ORTHO05D007300 1.1e-19 99.8 62 83.9
BraA07t30426Z Brassica rapa HOM05D005652 ORTHO05D007300 1.1e-19 99.8 62 83.9
Carub.0002s2459 Capsella rubella HOM05D005652 ORTHO05D007300 1.1e-19 99.8 62 83.9
CARHR071220 Cardamine hirsuta HOM05D005652 ORTHO05D007300 1.1e-19 99.8 62 83.9
Thhalv10019370m.g Eutrema salsugineum HOM05D005652 ORTHO05D007300 1.1e-19 99.8 62 83.9
Sp5g32880 Schrenkiella parvula HOM05D005652 ORTHO05D007300 1.1e-19 99.8 62 83.9
unitig_37.g12684 Utricularia gibba HOM05D005652 ORTHO05D007300 1.1e-19 99.8 62 85.5
arahy.Tifrunner.gnm1.ann1.KZ1VTZ Arachis hypogaea HOM05D005652 ORTHO05D007300 1.4e-19 99.4 62 85.5
Migut.N03303 Erythranthe guttata HOM05D005652 ORTHO05D007300 1.4e-19 99.4 62 85.5
PSO170G5049 Papaver somniferum HOM05D005652 ORTHO05D007300 1.4e-19 99.4 62 85.5
PSO528G0083 Papaver somniferum HOM05D005652 ORTHO05D007300 1.4e-19 99.4 62 85.5
Ah.05g172270 Amaranthus hybridus HOM05D005652 ORTHO05D007300 1.8e-19 99.0 62 83.9
Os01g0962400 Oryza sativa ssp. japonica HOM05D005652 ORTHO05D007300 1.8e-19 99.0 62 83.9
SalBow7G1395 Salvia bowleyana HOM05D005652 ORTHO05D007300 1.8e-19 99.0 61 86.9
CBR_g44443 Chara braunii HOM05D005652 ORTHO05D007300 2.3e-19 98.6 62 83.9
Migut.C01167 Erythranthe guttata HOM05D005652 ORTHO05D007300 2.3e-19 98.6 60 86.7
Gohir.D02G081400 Gossypium hirsutum HOM05D005652 ORTHO05D007300 3.1e-19 98.2 62 85.5
EL10Ac1g00017 Beta vulgaris HOM05D005652 ORTHO05D007300 4.0e-19 97.8 62 82.3
Mapoly0081s0039 Marchantia polymorpha HOM05D005652 ORTHO05D007300 4.0e-19 97.8 62 83.9
AagrBONN_evm.TU.Sc2ySwM_362.1619 Anthoceros agrestis HOM05D005652 ORTHO05D007300 5.2e-19 97.4 62 82.3
Zm00001eb140360 Zea mays HOM05D005652 ORTHO05D007300 5.2e-19 97.4 62 80.6
Lsat_1_v5_gn_5_65281 Lactuca sativa HOM05D005652 ORTHO05D007300 8.9e-19 96.7 62 82.3
HPP92_028057 Vanilla planifolia HOM05D005652 ORTHO05D007300 9.8e-18 93.2 76 69.7
SMO147G0269 Selaginella moellendorffii HOM05D005652 ORTHO05D007300 2.9e-17 91.7 62 77.4
Actinidia02604 Actinidia chinensis HOM05D005652 ORTHO05D007300 1.1e-16 89.7 82 65.9
FAN15G0151 Fragaria x ananassa HOM05D000102 ORTHO05D003793 1.1e-16 89.7 86 61.6
Haze_27250 Corylus avellana HOM05D005652 ORTHO05D007300 1.3e-14 82.8 60 68.3
CAN.G947.38 Capsicum annuum HOM05D005652 ORTHO05D007300 1.7e-14 82.4 65 67.7
Cpa.g.sc36.14 Carica papaya HOM05D005652 ORTHO05D007300 3.9e-14 81.3 60 76.7
PRCOL_00001930 Prasinoderma coloniale HOM05D005652 ORTHO05D007300 5.0e-14 80.9 59 74.6
AUR62023629 Chenopodium quinoa HOM05D000102 ORTHO05D003793 6.6e-14 80.5 44 90.9
COL.COLO4_38344 Corchorus olitorius HOM05D005652 ORTHO05D007300 6.6e-14 80.5 52 84.6
Rhsim11G0066600 Rhododendron simsii HOM05D005652 ORTHO05D007300 6.6e-14 80.5 44 90.9
Glyma.13G082800 Glycine max HOM05D005652 ORTHO05D007300 1.1e-13 79.7 44 90.9
AUR62004713 Chenopodium quinoa HOM05D005652 ORTHO05D007300 1.9e-13 79.0 50 84.0
Actinidia13808 Actinidia chinensis HOM05D005652 ORTHO05D007300 1.1e-11 73.2 50 78.0
BraA02t07181Z Brassica rapa HOM05D005652 ORTHO05D007300 4.6e-07 57.8 38 76.3
TAR381G0412 Trochodendron aralioides HOM05D000102 ORTHO05D003793 6.0e-07 57.4 32 87.5


User provided reference genes

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