Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu062503.1 Olea europaea HOM05D000811 ORTHO05D007840 6.8e-57 223.8 114 100.0
Lj2A466G44 Lonicera japonica HOM05D000811 ORTHO05D007840 3.8e-31 138.3 96 70.8
Lj2A474G39 Lonicera japonica HOM05D000811 ORTHO05D007840 3.8e-31 138.3 96 70.8
MSTRG.2702 Avicennia marina HOM05D000811 ORTHO05D007840 4.9e-31 137.9 96 70.8
CAN.G1671.2 Capsicum annuum HOM05D000811 ORTHO05D007840 6.4e-31 137.5 96 67.7
Nitab4.5_0004254g0050 Nicotiana tabacum HOM05D000811 ORTHO05D007840 1.4e-30 136.3 102 65.7
Nitab4.5_0005721g0040 Nicotiana tabacum HOM05D000811 ORTHO05D007840 1.4e-30 136.3 102 65.7
CSS0011847 Camellia sinensis var. sinensis HOM05D000811 ORTHO05D007840 1.9e-30 136.0 106 60.4
Dinv40075 Davidia involucrata HOM05D000811 ORTHO05D007840 1.9e-30 136.0 106 63.2
CAN.G724.41 Capsicum annuum HOM05D000811 ORTHO05D007840 4.1e-30 134.8 100 64.0
SalBow3G3717 Salvia bowleyana HOM05D000811 ORTHO05D007840 7.1e-30 134.0 92 70.7
CSS0008295 Camellia sinensis var. sinensis HOM05D000811 ORTHO05D007840 1.2e-29 133.3 86 70.9
Solyc02g084030.3 Solanum lycopersicum HOM05D000811 ORTHO05D007840 2.1e-29 132.5 88 69.3
GSVIVG01018799001 Vitis vinifera HOM05D000811 ORTHO05D007840 3.5e-29 131.7 86 72.1
Sopen02g028830 Solanum pennellii HOM05D000811 ORTHO05D007840 4.6e-29 131.3 88 68.2
PGSC0003DMG400003634 Solanum tuberosum HOM05D000811 ORTHO05D007840 7.8e-29 130.6 96 64.6
Cpa.g.sc6.232 Carica papaya HOM05D000811 ORTHO05D007840 2.3e-28 129.0 106 61.3
vmacro18419 Vaccinium macrocarpon HOM05D000811 ORTHO05D007840 3.9e-28 128.3 90 68.9
Hma1.2p1_0743F.1_g211546 Hydrangea macrophylla HOM05D000811 ORTHO05D007840 5.1e-28 127.9 95 66.3
Hma1.2p1_2281F.1_g318780 Hydrangea macrophylla HOM05D000811 ORTHO05D007840 5.1e-28 127.9 95 66.3
Sc16g0002060 Simmondsia chinensis HOM05D000811 ORTHO05D007840 6.6e-28 127.5 106 59.4
Hma1.2p1_2281F.1_g318770 Hydrangea macrophylla HOM05D000811 ORTHO05D007840 2.5e-27 125.6 89 66.3
Sp3g31460 Schrenkiella parvula HOM05D000811 ORTHO05D007840 5.6e-27 124.4 112 57.1
TWI09G0870 Tripterygium wilfordii HOM05D000811 ORTHO05D007840 5.6e-27 124.4 95 63.2
HanXRQChr15g0487231 Helianthus annuus HOM05D000811 ORTHO05D007840 9.6e-27 123.6 89 64.0
PSO541G4766 Papaver somniferum HOM05D000811 ORTHO05D007840 9.6e-27 123.6 90 64.4
Thecc.01G020800 Theobroma cacao HOM05D000811 ORTHO05D007840 9.6e-27 123.6 97 63.9
Nn5g29276 Nelumbo nucifera HOM05D000811 ORTHO05D007840 1.6e-26 122.9 85 67.1
Cfa006960 Carpinus fangiana HOM05D000811 ORTHO05D007840 2.1e-26 122.5 96 62.5
Migut.H01151 Erythranthe guttata HOM05D000811 ORTHO05D007840 2.1e-26 122.5 90 67.8
PGR119G1393 Punica granatum HOM05D000811 ORTHO05D007840 2.1e-26 122.5 98 66.3
Rhsim08G0034300 Rhododendron simsii HOM05D000811 ORTHO05D007840 2.8e-26 122.1 87 70.1
SGA_v2.0_scaffold137G35079 Striga asiatica HOM05D000811 ORTHO05D007840 3.6e-26 121.7 92 64.1
Thhalv10022823m.g Eutrema salsugineum HOM05D000811 ORTHO05D007840 4.7e-26 121.3 106 55.7
PSO675G0258 Papaver somniferum HOM05D000811 ORTHO05D007840 4.7e-26 121.3 91 64.8
Potri.007G012900 Populus trichocarpa HOM05D000811 ORTHO05D007840 4.7e-26 121.3 88 69.3
TAR625G1510 Trochodendron aralioides HOM05D000811 ORTHO05D007840 4.7e-26 121.3 93 63.4
Atru.chr3.786 Acer truncatum HOM05D000811 ORTHO05D007840 8.1e-26 120.6 88 64.8
AUR62043612 Chenopodium quinoa HOM05D000811 ORTHO05D007840 8.1e-26 120.6 97 60.8
AUR62044454 Chenopodium quinoa HOM05D000811 ORTHO05D007840 8.1e-26 120.6 97 60.8
AT2G18030 Arabidopsis thaliana HOM05D000811 ORTHO05D007840 1.1e-25 120.2 106 54.7
Lsat_1_v5_gn_4_146761 Lactuca sativa HOM05D000811 ORTHO05D007840 1.1e-25 120.2 88 63.6
Prupe.1G202800 Prunus persica HOM05D000811 ORTHO05D007840 1.1e-25 120.2 107 58.9
Carub.0003s3218 Capsella rubella HOM05D000811 ORTHO05D007840 3.1e-25 118.6 106 55.7
Gohir.A12G060100 Gossypium hirsutum HOM05D000811 ORTHO05D007840 3.1e-25 118.6 96 61.5
Duzib264G0346 Durio zibethinus HOM05D000811 ORTHO05D007840 4.0e-25 118.2 93 64.5
Gohir.D12G060200 Gossypium hirsutum HOM05D000811 ORTHO05D007840 5.2e-25 117.9 96 61.5
Gorai.008G063300 Gossypium raimondii HOM05D000811 ORTHO05D007840 5.2e-25 117.9 96 61.5
AL3G51180 Arabidopsis lyrata HOM05D000811 ORTHO05D007840 6.9e-25 117.5 107 56.1
Ciclev10026355m.g Citrus clementina HOM05D000811 ORTHO05D007840 8.9e-25 117.1 95 60.0
Haze_03790 Corylus avellana HOM05D000811 ORTHO05D007840 8.9e-25 117.1 92 64.1
Lj4g0023417 Lotus japonicus HOM05D000811 ORTHO05D007840 8.9e-25 117.1 98 57.1
Medtr8g076060 Medicago truncatula HOM05D000811 ORTHO05D007840 8.9e-25 117.1 113 55.8
THA.LOC104807489 Tarenaya hassleriana HOM05D000811 ORTHO05D007840 8.9e-25 117.1 102 59.8
BcaB07g31695 Brassica carinata HOM05D000811 ORTHO05D007840 1.2e-24 116.7 106 56.6
Peaxi162Scf00083g00821 Petunia axillaris HOM05D000811 ORTHO05D007840 1.2e-24 116.7 75 74.7
Cc00_g23380 Coffea canephora HOM05D000811 ORTHO05D007840 1.5e-24 116.3 92 65.2
QL06p033557 Quercus lobata HOM05D000811 ORTHO05D007840 1.5e-24 116.3 105 57.1
BolC9t54263H Brassica oleracea HOM05D000811 ORTHO05D007840 2.0e-24 115.9 97 57.7
BraA09t36813Z Brassica rapa HOM05D000811 ORTHO05D007840 2.0e-24 115.9 103 55.3
ECA232G2345 Erigeron canadensis HOM05D000811 ORTHO05D007840 2.6e-24 115.5 77 67.5
Ah.02g124470 Amaranthus hybridus HOM05D000811 ORTHO05D007840 3.4e-24 115.2 98 60.2
ClCG01G020180 Citrullus lanatus HOM05D000811 ORTHO05D007840 3.4e-24 115.2 107 58.9
Hund14040 Selenicereus undatus HOM05D000811 ORTHO05D007840 4.4e-24 114.8 98 61.2
BcaC04g22934 Brassica carinata HOM05D000811 ORTHO05D007840 5.8e-24 114.4 97 56.7
C09p13720 Brassica napus HOM05D000811 ORTHO05D007840 5.8e-24 114.4 97 56.7
Manes.02G103100 Manihot esculenta HOM05D000811 ORTHO05D007840 5.8e-24 114.4 100 57.0
arahy.Tifrunner.gnm1.ann1.IAHM14 Arachis hypogaea HOM05D000811 ORTHO05D007840 9.9e-24 113.6 87 65.5
arahy.Tifrunner.gnm1.ann1.JKZZ7D Arachis hypogaea HOM05D000811 ORTHO05D007840 9.9e-24 113.6 87 65.5
COL.COLO4_21928 Corchorus olitorius HOM05D000811 ORTHO05D007840 9.9e-24 113.6 82 65.9
Sabra07G0009900 Salix brachista HOM05D000811 ORTHO05D007840 9.9e-24 113.6 88 65.9
CiPaw.07G057400 Carya illinoinensis HOM05D000811 ORTHO05D007840 1.3e-23 113.2 92 63.0
CsaV3_6G046980 Cucumis sativus L. HOM05D000811 ORTHO05D007840 1.7e-23 112.8 98 60.2
Glyma.16G129800 Glycine max HOM05D000811 ORTHO05D007840 1.7e-23 112.8 113 53.1
TPR.G30060 Trifolium pratense HOM05D000811 ORTHO05D007840 1.7e-23 112.8 93 60.2
A09p11680 Brassica napus HOM05D000811 ORTHO05D007840 2.2e-23 112.5 103 53.4
Lalb_Chr16g0391201 Lupinus albus HOM05D000811 ORTHO05D007840 2.2e-23 112.5 92 63.0
MELO3C007891.2 Cucumis melo HOM05D000811 ORTHO05D007840 2.9e-23 112.1 98 60.2
Psat4g098520 Pisum sativum HOM05D000811 ORTHO05D007840 3.8e-23 111.7 113 52.2
RcHm_v2.0_Chr0c32g0501631 Rosa chinensis HOM05D000811 ORTHO05D007840 3.8e-23 111.7 107 56.1
HPP92_025838 Vanilla planifolia HOM05D000811 ORTHO05D007840 3.8e-23 111.7 96 55.2
CARHR108520 Cardamine hirsuta HOM05D000811 ORTHO05D007840 4.9e-23 111.3 89 58.4
Duzib147G1611 Durio zibethinus HOM05D000811 ORTHO05D007840 4.9e-23 111.3 91 61.5
Glyma.02G049400 Glycine max HOM05D000811 ORTHO05D007840 4.9e-23 111.3 95 58.9
RcHm_v2.0_Chr3g0483821 Rosa chinensis HOM05D000811 ORTHO05D007840 4.9e-23 111.3 107 56.1
Ca_22370_v3 Cicer arietinum L. HOM05D000811 ORTHO05D007840 8.4e-23 110.5 107 55.1
Cc07_g21120 Coffea canephora HOM05D000811 ORTHO05D007840 8.4e-23 110.5 92 63.0
FvH4_6g24560 Fragaria vesca HOM05D000811 ORTHO05D007840 8.4e-23 110.5 108 57.4
FAN14G3764 Fragaria x ananassa HOM05D000811 ORTHO05D007840 8.4e-23 110.5 108 57.4
VMungo0251G2049 Vigna mungo HOM05D000811 ORTHO05D007840 8.4e-23 110.5 88 60.2
Eucgr.J02417 Eucalyptus grandis HOM05D000811 ORTHO05D007840 1.4e-22 109.8 94 55.3
FAN02G1033 Fragaria x ananassa HOM05D000811 ORTHO05D007840 1.4e-22 109.8 108 56.5
RcHm_v2.0_Chr3g0483661 Rosa chinensis HOM05D000811 ORTHO05D007840 1.4e-22 109.8 107 55.1
DCAR_021499 Daucus carota HOM05D000811 ORTHO05D007840 1.9e-22 109.4 78 66.7
FAN05G3534 Fragaria x ananassa HOM05D000811 ORTHO05D007840 1.9e-22 109.4 108 56.5
Sed0020033 Sechium edule HOM05D000811 ORTHO05D007840 2.4e-22 109.0 107 55.1
Actinidia22988 Actinidia chinensis HOM05D000811 ORTHO05D007840 3.2e-22 108.6 55 89.1
Aa31LG8G15210 Aethionema arabicum HOM05D000811 ORTHO05D007840 4.2e-22 108.2 106 54.7
FAN09G1557 Fragaria x ananassa HOM05D000811 ORTHO05D007840 5.4e-22 107.8 102 56.9
Lalb_Chr05g0229871 Lupinus albus HOM05D000811 ORTHO05D007840 2.7e-21 105.5 77 62.3
Eucgr.J02409 Eucalyptus grandis HOM05D000811 ORTHO05D007840 7.8e-21 104.0 117 51.3
unitig_37.g12157 Utricularia gibba HOM05D000811 ORTHO05D007840 1.0e-20 103.6 85 60.0
Phvul.003G260900 Phaseolus vulgaris HOM05D000811 ORTHO05D007840 3.0e-20 102.1 88 55.7
CDE08G1305 Ceratophyllum demersum HOM05D000811 ORTHO05D007840 2.8e-18 95.5 96 47.9
AagrBONN_evm.TU.Sc2ySwM_117.1381 Anthoceros agrestis HOM05D000811 ORTHO05D007840 8.1e-18 94.0 57 66.7
ATR0147G018 Amborella trichopoda HOM05D000811 ORTHO05D007840 1.8e-17 92.8 94 52.1
Os06g0138100 Oryza sativa ssp. japonica HOM05D000811 ORTHO05D007840 5.3e-17 91.3 54 72.2
Zm00001eb377760 Zea mays HOM05D000811 ORTHO05D007840 9.0e-17 90.5 53 73.6
Mapoly0044s0097 Marchantia polymorpha HOM05D000811 ORTHO05D007840 3.4e-16 88.6 91 46.2
CBR_g40417 Chara braunii HOM05D000811 ORTHO05D007840 4.9e-15 84.7 92 44.6
SMO239G0139 Selaginella moellendorffii HOM05D000811 ORTHO05D007840 8.4e-15 84.0 54 63.0
Pp3c19_10080 Physcomitrium patens HOM05D000811 ORTHO05D007840 2.4e-14 82.4 47 76.6
CBR_g40629 Chara braunii HOM05D000811 ORTHO05D007840 3.5e-13 78.6 54 57.4
SMO239G0160 Selaginella moellendorffii HOM05D000811 ORTHO05D007840 2.5e-11 72.4 49 61.2
SMO239G0133 Selaginella moellendorffii HOM05D000811 ORTHO05D007840 1.6e-10 69.7 59 54.2
Haze_26512 Corylus avellana HOM05D000811 ORTHO05D001558 8.1e-10 67.4 54 51.9
COL.COLO4_09359 Corchorus olitorius HOM05D000811 ORTHO05D011421 1.7e-07 59.7 81 38.3
Duzib138G0733 Durio zibethinus HOM05D000811 ORTHO05D011421 4.9e-07 58.2 88 36.4
Cc07_g08630 Coffea canephora HOM05D000811 ORTHO05D011421 1.9e-06 56.2 76 39.5
MCO08G038 Micromonas commoda HOM05D000811 ORTHO05D001558 1.9e-06 56.2 73 39.7
Cfa007901 Carpinus fangiana HOM05D000811 ORTHO05D011421 2.4e-06 55.8 59 45.8
Dinv34802 Davidia involucrata HOM05D000811 ORTHO05D011421 2.4e-06 55.8 59 44.1
Actinidia36336 Actinidia chinensis HOM05D000811 ORTHO05D011421 3.2e-06 55.5 55 47.3
PRCOL_00000227 Prasinoderma coloniale HOM05D000811 ORTHO05D001558 9.3e-06 53.9 59 45.8
Thecc.04G130000 Theobroma cacao HOM05D000811 ORTHO05D011421 9.3e-06 53.9 75 36.0


User provided reference genes

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