Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu062437.1 Olea europaea HOM05D005490 ORTHO05D006606 0.0e+00 1303.5 727 100.0
Oeu031525.2 Olea europaea HOM05D005490 ORTHO05D006606 9.9e-210 734.2 499 84.8
Dinv29986 Davidia involucrata HOM05D005490 ORTHO05D006606 4.8e-188 662.1 510 73.9
Cc07_g05990 Coffea canephora HOM05D005490 ORTHO05D006606 1.1e-187 661.0 485 79.6
Lj7A69T47 Lonicera japonica HOM05D005490 ORTHO05D006606 1.7e-185 653.7 536 72.8
DCAR_025733 Daucus carota HOM05D005490 ORTHO05D006606 1.2e-183 647.5 510 72.0
Nitab4.5_0002016g0110 Nicotiana tabacum HOM05D005490 ORTHO05D006606 3.5e-183 646.0 487 76.6
Manes.12G106800 Manihot esculenta HOM05D005490 ORTHO05D006606 1.6e-180 637.1 488 75.2
CiPaw.01G018200 Carya illinoinensis HOM05D005490 ORTHO05D006606 2.0e-178 630.2 485 74.0
Actinidia03792 Actinidia chinensis HOM05D005490 ORTHO05D006606 3.5e-175 619.4 500 72.6
TWI09G1398 Tripterygium wilfordii HOM05D005490 ORTHO05D006606 6.0e-175 618.6 487 74.3
Cfa004023 Carpinus fangiana HOM05D005490 ORTHO05D006606 1.3e-174 617.5 486 74.5
Migut.H00433 Erythranthe guttata HOM05D005490 ORTHO05D006606 6.7e-174 615.1 487 74.9
QL06p041379 Quercus lobata HOM05D005490 ORTHO05D006606 7.4e-173 611.7 519 69.2
Potri.007G044100 Populus trichocarpa HOM05D005490 ORTHO05D006606 1.3e-172 610.9 488 71.9
Lsat_1_v5_gn_2_84101 Lactuca sativa HOM05D005490 ORTHO05D006606 1.4e-171 607.4 508 72.0
GSVIVG01022130001 Vitis vinifera HOM05D005490 ORTHO05D006606 1.8e-171 607.1 499 71.7
Gohir.D11G199100 Gossypium hirsutum HOM05D005490 ORTHO05D006606 2.4e-171 606.7 485 73.2
Solyc02g090850.3 Solanum lycopersicum HOM05D005490 ORTHO05D006606 4.0e-171 605.9 450 74.2
PGSC0003DMG400004042 Solanum tuberosum HOM05D005490 ORTHO05D006606 6.9e-171 605.1 450 74.2
CAN.G660.7 Capsicum annuum HOM05D005490 ORTHO05D006606 9.0e-171 604.7 452 75.7
Nn5g30300 Nelumbo nucifera HOM05D005490 ORTHO05D006606 1.5e-170 604.0 501 71.7
Thecc.01G056300 Theobroma cacao HOM05D005490 ORTHO05D006606 3.2e-168 596.3 488 71.3
RcHm_v2.0_Chr2g0105671 Rosa chinensis HOM05D005490 ORTHO05D006606 1.2e-167 594.3 501 71.7
CSS0049924 Camellia sinensis var. sinensis HOM05D005490 ORTHO05D006606 3.5e-167 592.8 488 73.0
Ciclev10025320m.g Citrus clementina HOM05D005490 ORTHO05D006606 3.5e-167 592.8 486 71.6
Duzib187G0068 Durio zibethinus HOM05D005490 ORTHO05D006606 1.8e-166 590.5 512 68.6
Sc03g0001580 Simmondsia chinensis HOM05D005490 ORTHO05D006606 1.8e-166 590.5 486 73.5
Hma1.2p1_0461F.1_g157810 Hydrangea macrophylla HOM05D005490 ORTHO05D006606 3.3e-165 586.3 500 70.8
FAN19G0012 Fragaria x ananassa HOM05D005490 ORTHO05D006606 8.2e-164 581.6 499 70.3
Lj2g0003149 Lotus japonicus HOM05D005490 ORTHO05D006606 1.4e-163 580.9 487 70.2
Lalb_Chr05g0213291 Lupinus albus HOM05D005490 ORTHO05D006606 5.3e-163 578.9 489 69.7
HanXRQChr14g0442791 Helianthus annuus HOM05D005490 ORTHO05D006606 6.9e-163 578.6 484 69.4
FAN28G1226 Fragaria x ananassa HOM05D005490 ORTHO05D006606 1.5e-162 577.4 515 69.1
TPR.G30705 Trifolium pratense HOM05D005490 ORTHO05D006606 4.5e-162 575.9 501 71.9
Medtr5g017430 Medicago truncatula HOM05D005490 ORTHO05D006606 7.7e-162 575.1 500 71.8
Psat2g166360 Pisum sativum HOM05D005490 ORTHO05D006606 1.3e-161 574.3 500 69.0
Prupe.7G133300 Prunus persica HOM05D005490 ORTHO05D006606 2.2e-161 573.5 485 68.2
VMungo1215G3252 Vigna mungo HOM05D005490 ORTHO05D006606 1.1e-160 571.2 486 69.1
Glyma.01G186000 Glycine max HOM05D005490 ORTHO05D006606 1.9e-160 570.5 502 67.9
Gorai.007G213300 Gossypium raimondii HOM05D005490 ORTHO05D006606 1.9e-160 570.5 499 70.1
EL10Ac6g15745 Beta vulgaris HOM05D005490 ORTHO05D006606 4.2e-160 569.3 502 69.5
Gohir.A11G192400 Gossypium hirsutum HOM05D005490 ORTHO05D006606 9.4e-160 568.2 483 69.6
CANSAT01G1717 Cannabis sativa HOM05D005490 ORTHO05D006606 6.1e-159 565.5 452 70.8
Sed0007368 Sechium edule HOM05D005490 ORTHO05D006606 3.9e-158 562.8 489 69.3
A01p01850 Brassica napus HOM05D005490 ORTHO05D006606 6.7e-158 562.0 486 68.3
BraA01t00174Z Brassica rapa HOM05D005490 ORTHO05D006606 6.7e-158 562.0 486 68.3
arahy.Tifrunner.gnm1.ann1.JF37M9 Arachis hypogaea HOM05D005490 ORTHO05D006606 8.8e-158 561.6 486 69.1
ECA238G0711 Erigeron canadensis HOM05D005490 ORTHO05D006606 3.3e-157 559.7 510 69.4
Aa31LG6G13990 Aethionema arabicum HOM05D005490 ORTHO05D006606 7.4e-157 558.5 517 66.3
C01p01990 Brassica napus HOM05D005490 ORTHO05D006606 9.7e-157 558.1 486 68.1
Sp7g34780 Schrenkiella parvula HOM05D005490 ORTHO05D006606 1.7e-156 557.4 501 68.1
Carub.0007s0317 Capsella rubella HOM05D005490 ORTHO05D006606 2.2e-156 557.0 485 69.5
THA.LOC104804216 Tarenaya hassleriana HOM05D005490 ORTHO05D006606 2.8e-156 556.6 489 68.1
Thhalv10025018m.g Eutrema salsugineum HOM05D005490 ORTHO05D006606 3.1e-155 553.1 487 70.2
SGA_v2.0_scaffold15G07303 Striga asiatica HOM05D005490 ORTHO05D006606 5.3e-155 552.4 449 73.7
Phvul.002G018900 Phaseolus vulgaris HOM05D005490 ORTHO05D006606 5.9e-154 548.9 490 66.9
BolC1t00193H Brassica oleracea HOM05D005490 ORTHO05D006606 1.7e-153 547.4 497 66.4
Hund16323 Selenicereus undatus HOM05D005490 ORTHO05D006606 1.7e-153 547.4 479 68.9
Sabra07G0038800 Salix brachista HOM05D005490 ORTHO05D006606 3.8e-153 546.2 502 64.3
Gohir.A02G157300 Gossypium hirsutum HOM05D005490 ORTHO05D006606 8.5e-153 545.0 485 68.2
Peaxi162Scf00450g00420 Petunia axillaris HOM05D005490 ORTHO05D006606 8.5e-153 545.0 485 64.7
CsaV3_2G016660 Cucumis sativus L. HOM05D005490 ORTHO05D006606 1.9e-152 543.9 452 69.9
COL.COLO4_11415 Corchorus olitorius HOM05D005490 ORTHO05D006606 4.2e-152 542.7 446 70.4
PSO170G3823 Papaver somniferum HOM05D005490 ORTHO05D006606 9.4e-152 541.6 451 71.4
PSO210G6251 Papaver somniferum HOM05D005490 ORTHO05D006606 2.1e-151 540.4 451 71.2
CDE08G0045 Ceratophyllum demersum HOM05D005490 ORTHO05D006606 1.0e-150 538.1 497 65.2
AT4G36980 Arabidopsis thaliana HOM05D005490 ORTHO05D006606 2.3e-150 537.0 485 66.8
AL7G13750 Arabidopsis lyrata HOM05D005490 ORTHO05D006606 3.0e-150 536.6 485 67.8
Glyma.11G056000 Glycine max HOM05D005490 ORTHO05D006606 2.6e-149 533.5 516 65.7
Ca_24770_v3 Cicer arietinum L. HOM05D005490 ORTHO05D006606 5.7e-149 532.3 500 66.6
arahy.Tifrunner.gnm1.ann1.5GG3L5 Arachis hypogaea HOM05D005490 ORTHO05D006606 2.4e-147 526.9 516 63.6
Gorai.003G025100 Gossypium raimondii HOM05D005490 ORTHO05D006606 5.3e-147 525.8 483 68.1
ClCG02G012530 Citrullus lanatus HOM05D005490 ORTHO05D006606 3.5e-146 523.1 489 65.0
CARHR245520 Cardamine hirsuta HOM05D005490 ORTHO05D006606 1.7e-145 520.8 500 66.4
AUR62001928 Chenopodium quinoa HOM05D005490 ORTHO05D006606 2.7e-143 513.5 533 60.4
Gohir.D03G023600 Gossypium hirsutum HOM05D005490 ORTHO05D006606 3.9e-142 509.6 449 69.9
BcaNung02520 Brassica carinata HOM05D005490 ORTHO05D006606 5.2e-142 509.2 460 65.7
CDE06G1923 Ceratophyllum demersum HOM05D005490 ORTHO05D006606 6.7e-142 508.8 467 64.5
ATR1102G026 Amborella trichopoda HOM05D005490 ORTHO05D006606 2.0e-141 507.3 503 66.2
Os03g0395900 Oryza sativa ssp. japonica HOM05D005490 ORTHO05D006606 7.2e-136 488.8 450 64.0
HPP92_004114 Vanilla planifolia HOM05D005490 ORTHO05D006606 6.1e-135 485.7 485 62.5
Nitab4.5_0002440g0010 Nicotiana tabacum HOM05D005490 ORTHO05D006606 1.0e-134 485.0 488 59.0
Potri.005G138200 Populus trichocarpa HOM05D005490 ORTHO05D006606 4.0e-134 483.0 375 71.5
Aqoxy5G01229 Aquilegia oxysepala HOM05D005490 ORTHO05D006606 1.4e-131 474.6 375 72.3
MD02G1172000 Malus domestica HOM05D005490 ORTHO05D006606 4.0e-126 456.4 376 69.1
TAR381G1106 Trochodendron aralioides HOM05D005490 ORTHO05D006606 8.3e-124 448.7 375 67.7
FAN26G0668 Fragaria x ananassa HOM05D005490 ORTHO05D006606 7.2e-120 435.6 390 66.4
Sabra05G0112300 Salix brachista HOM05D005490 ORTHO05D006606 8.3e-116 422.2 530 55.8
AUR62003882 Chenopodium quinoa HOM05D005490 ORTHO05D006606 7.3e-112 409.1 476 53.4
FAN23G2111 Fragaria x ananassa HOM05D005490 ORTHO05D006606 2.2e-108 397.5 397 63.2
Ah.03g145080 Amaranthus hybridus HOM05D005490 ORTHO05D006606 2.4e-107 394.0 385 65.7
Hma1.2p1_0461F.1_g157800 Hydrangea macrophylla HOM05D005490 ORTHO05D006606 1.3e-105 388.3 366 70.2
Rhsim08G0100400 Rhododendron simsii HOM05D005490 ORTHO05D006606 5.0e-105 386.3 452 57.3
Dinv39848 Davidia involucrata HOM05D005490 ORTHO05D006606 1.1e-104 385.2 287 75.3
Mapoly0012s0107 Marchantia polymorpha HOM05D005490 ORTHO05D006606 3.3e-104 383.6 467 55.0
unitig_899.g14662 Utricularia gibba HOM05D005490 ORTHO05D006606 5.6e-104 382.9 378 64.6
vmacro17955 Vaccinium macrocarpon HOM05D005490 ORTHO05D006606 8.3e-100 369.0 399 63.9
FvH4_1g16060 Fragaria vesca HOM05D005490 ORTHO05D006606 6.0e-98 362.8 344 68.0
Eucgr.I00926 Eucalyptus grandis HOM05D005490 ORTHO05D006606 1.3e-92 345.1 361 63.7
MD15G1284300 Malus domestica HOM05D005490 ORTHO05D006606 5.6e-88 329.7 337 62.9
Pp3c7_5520 Physcomitrium patens HOM05D005490 ORTHO05D006606 7.3e-88 329.3 523 47.4
Atru.chr3.327 Acer truncatum HOM05D005490 ORTHO05D006606 9.6e-88 328.9 309 68.9
Pp3c11_20900 Physcomitrium patens HOM05D005490 ORTHO05D006606 8.1e-87 325.9 525 49.1
MELO3C020875.2 Cucumis melo HOM05D005490 ORTHO05D006606 1.7e-81 308.1 311 64.3
HPP92_004074 Vanilla planifolia HOM05D005490 ORTHO05D006606 9.3e-75 285.8 342 59.6
Haze_15401 Corylus avellana HOM05D005490 ORTHO05D006606 7.3e-72 276.2 234 68.8
Sopen02g035470 Solanum pennellii HOM05D005490 ORTHO05D006606 1.3e-71 275.4 242 66.9
Haze_15403 Corylus avellana HOM05D005490 ORTHO05D006606 1.8e-70 271.6 234 67.9
SEGI_41077 Sequoiadendron giganteum HOM05D005490 ORTHO05D006606 9.0e-70 269.2 333 61.0
Zm00001eb019290 Zea mays HOM05D005490 ORTHO05D006606 1.1e-67 262.3 271 59.8
Actinidia16483 Actinidia chinensis HOM05D005490 ORTHO05D006606 6.7e-65 253.1 318 58.2
SMO356G0652 Selaginella moellendorffii HOM05D005490 ORTHO05D006606 1.1e-56 225.7 251 54.6
SEGI_00791 Sequoiadendron giganteum HOM05D005490 ORTHO05D006606 1.1e-56 225.7 153 72.5
Atru.chr3.328 Acer truncatum HOM05D005490 ORTHO05D006606 2.4e-54 218.0 128 82.0
Cpa.g.sc55.148 Carica papaya HOM05D005490 ORTHO05D006606 1.0e-52 212.6 128 79.7
CBR_g38045 Chara braunii HOM05D005490 ORTHO05D000004 1.3e-52 212.2 470 43.2
MD15G1284200 Malus domestica HOM05D005490 ORTHO05D006606 8.7e-49 199.5 128 79.7
Actinidia36493 Actinidia chinensis HOM05D005490 ORTHO05D006606 7.4e-48 196.4 351 44.2
CSS0031445 Camellia sinensis var. sinensis HOM05D005490 ORTHO05D006606 5.9e-37 160.2 114 82.5
Actinidia16484 Actinidia chinensis HOM05D005490 ORTHO05D006606 2.9e-36 157.9 84 88.1
AagrBONN_evm.TU.Sc2ySwM_344.4468 Anthoceros agrestis HOM05D005490 ORTHO05D006606 7.9e-34 149.8 470 30.4
Aqoxy5G01228 Aquilegia oxysepala HOM05D005490 ORTHO05D006606 4.4e-32 144.1 113 74.3
MD02G1172100 Malus domestica HOM05D005490 ORTHO05D006606 9.7e-32 142.9 126 75.4
VMungo1309G0325 Vigna mungo HOM05D005490 ORTHO05D006606 1.8e-25 122.1 161 49.7
TAR381G1012 Trochodendron aralioides HOM05D005490 ORTHO05D006606 7.0e-22 110.2 92 84.8
SHI08459 Sapria himalayana HOM05D005490 ORTHO05D006606 5.9e-21 107.1 66 78.8
FAN22G1581 Fragaria x ananassa HOM05D005490 ORTHO05D006606 1.3e-20 105.9 72 70.8
Actinidia36494 Actinidia chinensis HOM05D005490 ORTHO05D006606 8.5e-20 103.2 78 76.9
FAN17G2271 Fragaria x ananassa HOM05D005490 ORTHO05D006606 4.2e-19 100.9 66 74.2
VMungo0720G1861 Vigna mungo HOM05D005490 ORTHO05D006606 1.2e-18 99.4 144 48.6
CDE08G1038 Ceratophyllum demersum HOM05D005490 ORTHO05D006606 3.0e-17 94.7 383 28.7
FAN17G1267 Fragaria x ananassa HOM05D005490 ORTHO05D006606 4.4e-16 90.9 64 73.4
VMungo0251G2361 Vigna mungo HOM05D007793 ORTHO05D010104 1.3e-12 79.3 90 52.2
VMungo1309G1585 Vigna mungo HOM05D005490 ORTHO05D006606 4.2e-11 74.3 86 53.5
Atru.chr10.1611 Acer truncatum HOM05D005490 ORTHO05D006606 2.1e-10 72.0 50 66.0
Cre12.g498350 Chlamydomonas reinhardtii HOM05D005490 ORTHO05D006606 6.8e-09 67.0 193 28.5
ECA233G0248 Erigeron canadensis HOM05D000047 ORTHO05D006606 4.1e-06 57.8 110 43.6


User provided reference genes

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