Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu062376.1 Olea europaea HOM05D005581 ORTHO05D006792 1.7e-119 432.6 205 100.0
Oeu031508.1 Olea europaea HOM05D005581 ORTHO05D006792 2.0e-91 339.3 204 76.0
MSTRG.23979 Avicennia marina HOM05D005581 ORTHO05D006792 5.8e-91 337.8 204 78.4
Dinv33676 Davidia involucrata HOM05D005581 ORTHO05D006792 2.4e-89 332.4 204 76.5
Nitab4.5_0007185g0080 Nicotiana tabacum HOM05D005581 ORTHO05D006792 2.4e-89 332.4 195 79.0
CAN.G206.63 Capsicum annuum HOM05D005581 ORTHO05D006792 1.6e-88 329.7 194 77.8
Nitab4.5_0004905g0030 Nicotiana tabacum HOM05D000793 ORTHO05D006792 2.7e-88 328.9 195 77.9
Hma1.2p1_1975F.1_g309690 Hydrangea macrophylla HOM05D005581 ORTHO05D006792 4.6e-88 328.2 197 78.2
Peaxi162Scf00129g00828 Petunia axillaris HOM05D000793 ORTHO05D000783 4.6e-88 328.2 205 76.6
Migut.H00163 Erythranthe guttata HOM05D005581 ORTHO05D006792 7.8e-88 327.4 206 74.8
Actinidia36059 Actinidia chinensis HOM05D005581 ORTHO05D006792 3.9e-87 325.1 204 76.0
PGSC0003DMG400001392 Solanum tuberosum HOM05D005581 ORTHO05D006792 6.6e-87 324.3 190 78.4
SGA_v2.0_scaffold135G34832 Striga asiatica HOM05D005581 ORTHO05D006792 1.5e-86 323.2 202 73.3
Sopen02g032000 Solanum pennellii HOM05D005581 ORTHO05D006792 4.3e-86 321.6 190 77.4
Solyc02g087250.4 Solanum lycopersicum HOM05D000793 ORTHO05D000783 5.6e-86 321.2 190 77.4
CSS0034562 Camellia sinensis var. sinensis HOM05D005581 ORTHO05D006792 1.4e-84 316.6 201 73.6
CSS0041908 Camellia sinensis var. sinensis HOM05D005581 ORTHO05D006792 1.4e-84 316.6 201 73.6
SalBow1G8695 Salvia bowleyana HOM05D005581 ORTHO05D006792 2.6e-83 312.4 204 70.1
Duzib187G0556 Durio zibethinus HOM05D005581 ORTHO05D006792 9.9e-83 310.5 205 73.7
RhsimUnG0168100 Rhododendron simsii HOM05D005581 ORTHO05D006792 1.7e-82 309.7 205 71.7
Actinidia06044 Actinidia chinensis HOM05D005581 ORTHO05D006792 3.8e-82 308.5 204 72.5
GSVIVG01032543001 Vitis vinifera HOM05D005581 ORTHO05D006792 3.8e-82 308.5 203 72.9
Thecc.04G002800 Theobroma cacao HOM05D005581 ORTHO05D006792 3.2e-81 305.4 205 71.7
TAR629G0716 Trochodendron aralioides HOM05D005581 ORTHO05D006792 3.2e-81 305.4 204 70.1
COL.COLO4_06153 Corchorus olitorius HOM05D000793 ORTHO05D000783 4.2e-81 305.1 204 71.1
Manes.15G178800 Manihot esculenta HOM05D005581 ORTHO05D006792 1.6e-80 303.1 206 69.4
Duzib147G0516 Durio zibethinus HOM05D005581 ORTHO05D006792 2.1e-80 302.8 204 72.1
Potri.001G470300 Populus trichocarpa HOM05D005581 ORTHO05D006792 3.5e-80 302.0 192 75.0
Ciclev10016724m.g Citrus clementina HOM05D005581 ORTHO05D006792 6.0e-80 301.2 189 74.1
Prupe.3G278300 Prunus persica HOM05D005581 ORTHO05D006792 2.3e-79 299.3 204 70.6
Gohir.A05G361700 Gossypium hirsutum HOM05D005581 ORTHO05D006792 3.0e-79 298.9 191 73.8
Gohir.D04G052800 Gossypium hirsutum HOM05D005581 ORTHO05D006792 6.7e-79 297.7 185 75.1
Gorai.012G059200 Gossypium raimondii HOM05D005581 ORTHO05D006792 6.7e-79 297.7 185 75.1
DCAR_011192 Daucus carota HOM05D005581 ORTHO05D006792 1.3e-77 293.5 206 70.9
Sc06g0002610 Simmondsia chinensis HOM05D005581 ORTHO05D006792 2.1e-77 292.7 177 75.7
Lalb_Chr05g0228941 Lupinus albus HOM05D005581 ORTHO05D006792 2.8e-77 292.4 180 76.1
Sabra16G0319200 Salix brachista HOM05D005581 ORTHO05D006792 2.8e-77 292.4 193 73.1
Ciclev10012718m.g Citrus clementina HOM05D005581 ORTHO05D006792 3.6e-77 292.0 189 72.0
DCAR_003657 Daucus carota HOM05D005581 ORTHO05D006792 4.8e-77 291.6 198 69.2
Cfa007475 Carpinus fangiana HOM05D005581 ORTHO05D006792 8.1e-77 290.8 204 68.6
Hma1.2p1_0375F.1_g139010 Hydrangea macrophylla HOM05D005581 ORTHO05D006792 1.4e-76 290.0 185 73.5
QL02p078462 Quercus lobata HOM05D005581 ORTHO05D006792 5.3e-76 288.1 205 68.8
Hund12510 Selenicereus undatus HOM05D005581 ORTHO05D006792 9.0e-76 287.3 184 74.5
CiPaw.04G022300 Carya illinoinensis HOM05D005581 ORTHO05D006792 2.0e-75 286.2 205 68.3
Eucgr.J02171 Eucalyptus grandis HOM05D005581 ORTHO05D006792 2.6e-75 285.8 172 74.4
Lj2g0014392 Lotus japonicus HOM05D005581 ORTHO05D006792 2.6e-75 285.8 199 68.3
TWI12G0742 Tripterygium wilfordii HOM05D005581 ORTHO05D006792 2.6e-75 285.8 195 71.3
Cpa.g.sc14.80 Carica papaya HOM05D005581 ORTHO05D006792 5.8e-75 284.6 205 67.8
EL10Ac7g18001 Beta vulgaris HOM05D005581 ORTHO05D006792 7.6e-75 284.3 201 70.6
Gohir.D07G224600 Gossypium hirsutum HOM05D005581 ORTHO05D006792 7.6e-75 284.3 196 68.9
Nn3g17019 Nelumbo nucifera HOM05D005581 ORTHO05D006792 7.6e-75 284.3 201 69.7
arahy.Tifrunner.gnm1.ann1.B679M5 Arachis hypogaea HOM05D005581 ORTHO05D006792 2.2e-74 282.7 204 67.2
Glyma.13G116200 Glycine max HOM05D005581 ORTHO05D006792 2.2e-74 282.7 175 76.0
Gohir.A07G217500 Gossypium hirsutum HOM05D005581 ORTHO05D006792 2.2e-74 282.7 196 68.4
PGR083G1021 Punica granatum HOM05D005581 ORTHO05D006792 3.8e-74 282.0 194 68.0
Aqoxy3G03110 Aquilegia oxysepala HOM05D005581 ORTHO05D006792 8.4e-74 280.8 200 66.0
arahy.Tifrunner.gnm1.ann1.UYM2HQ Arachis hypogaea HOM05D005581 ORTHO05D006792 8.4e-74 280.8 203 66.0
Medtr7g030020 Medicago truncatula HOM05D005581 ORTHO05D006792 1.1e-73 280.4 196 68.4
Medtr7g038730 Medicago truncatula HOM05D005581 ORTHO05D006792 1.1e-73 280.4 196 68.4
FAN09G0871 Fragaria x ananassa HOM05D005581 ORTHO05D006792 1.9e-73 279.6 206 67.0
Lsat_1_v5_gn_0_16520 Lactuca sativa HOM05D005581 ORTHO05D006792 1.9e-73 279.6 189 69.8
Lj2g0006948 Lotus japonicus HOM05D005581 ORTHO05D006792 2.4e-73 279.3 171 75.4
FAN05G2284 Fragaria x ananassa HOM05D005581 ORTHO05D006792 4.2e-73 278.5 206 66.5
Gorai.001G259000 Gossypium raimondii HOM05D005581 ORTHO05D006792 4.2e-73 278.5 169 75.1
VMungo1215G0614 Vigna mungo HOM05D005581 ORTHO05D006792 4.2e-73 278.5 175 74.3
RcHm_v2.0_Chr2g0170291 Rosa chinensis HOM05D005581 ORTHO05D006792 5.5e-73 278.1 188 70.2
FAN14G0942 Fragaria x ananassa HOM05D005581 ORTHO05D006792 7.1e-73 277.7 195 69.2
MELO3C033644.2 Cucumis melo HOM05D005581 ORTHO05D006792 9.3e-73 277.3 195 67.7
FvH4_6g50030 Fragaria vesca HOM05D005581 ORTHO05D006792 9.3e-73 277.3 194 69.1
PSO832G0275 Papaver somniferum HOM05D005581 ORTHO05D006792 1.2e-72 276.9 169 73.4
CsaV3_5G037490 Cucumis sativus L. HOM05D005581 ORTHO05D006792 1.6e-72 276.6 195 66.7
TPR.G39154 Trifolium pratense HOM05D005581 ORTHO05D006792 2.1e-72 276.2 168 75.6
PSO591G0467 Papaver somniferum HOM05D005581 ORTHO05D006792 2.7e-72 275.8 169 73.4
arahy.Tifrunner.gnm1.ann1.E9CGF1 Arachis hypogaea HOM05D005581 ORTHO05D006792 3.5e-72 275.4 168 75.6
AUR62022121 Chenopodium quinoa HOM05D005581 ORTHO05D006792 4.6e-72 275.0 202 67.3
Lalb_Chr21g0319231 Lupinus albus HOM05D005581 ORTHO05D006792 6.0e-72 274.6 199 66.3
Atru.BG.224.p Acer truncatum HOM05D005581 ORTHO05D006792 7.9e-72 274.2 165 78.2
AUR62001208 Chenopodium quinoa HOM05D005581 ORTHO05D006792 7.9e-72 274.2 184 72.3
MD17G1040700 Malus domestica HOM05D005581 ORTHO05D006792 7.9e-72 274.2 202 66.3
PSO063G2781 Papaver somniferum HOM05D005581 ORTHO05D006792 7.9e-72 274.2 198 64.1
Sed0016453 Sechium edule HOM05D005581 ORTHO05D006792 1.3e-71 273.5 195 66.7
MBI15_g35865_MAGBIO Magnolia biondii HOM05D005581 ORTHO05D006792 1.8e-71 273.1 190 68.4
ECA240G2828 Erigeron canadensis HOM05D005581 ORTHO05D006792 2.3e-71 272.7 195 68.2
arahy.Tifrunner.gnm1.ann1.2M0NJC Arachis hypogaea HOM05D005581 ORTHO05D006792 3.0e-71 272.3 168 75.0
Ca_19611_v3 Cicer arietinum L. HOM05D005581 ORTHO05D006792 6.7e-71 271.2 201 66.7
Phvul.003G125600 Phaseolus vulgaris HOM05D005581 ORTHO05D006792 6.7e-71 271.2 169 74.0
ATR0624G029 Amborella trichopoda HOM05D005581 ORTHO05D006792 2.5e-70 269.2 168 73.2
CDE06G0044 Ceratophyllum demersum HOM05D005581 ORTHO05D006792 2.8e-69 265.8 170 70.0
SHI25585 Sapria himalayana HOM05D005581 ORTHO05D006792 4.8e-69 265.0 206 63.1
Psat3g165640 Pisum sativum HOM05D005581 ORTHO05D006792 8.1e-69 264.2 197 66.0
ClCG00G001710 Citrullus lanatus HOM05D005581 ORTHO05D006792 1.1e-68 263.8 198 64.6
ClCG09G018630 Citrullus lanatus HOM05D005581 ORTHO05D006792 1.1e-68 263.8 198 64.6
HPP92_026859 Vanilla planifolia HOM05D005581 ORTHO05D006792 2.4e-68 262.7 165 72.1
PSO832G2358 Papaver somniferum HOM05D005581 ORTHO05D006792 1.2e-67 260.4 178 66.9
Carub.0003s2629 Capsella rubella HOM05D005581 ORTHO05D006792 2.0e-67 259.6 196 64.3
Hund20033 Selenicereus undatus HOM05D005581 ORTHO05D006792 5.8e-67 258.1 198 63.6
Lj7A408G12 Lonicera japonica HOM05D005581 ORTHO05D006792 7.6e-67 257.7 147 80.3
Os06g0238300 Oryza sativa ssp. japonica HOM05D005581 ORTHO05D006792 2.9e-66 255.8 165 67.9
Zm00001eb279970 Zea mays HOM05D005581 ORTHO05D006792 1.9e-65 253.1 194 60.3
AT2G04690 Arabidopsis thaliana HOM05D005581 ORTHO05D006792 2.5e-65 252.7 201 61.2
TWI12G0286 Tripterygium wilfordii HOM05D005581 ORTHO05D006792 4.2e-65 251.9 194 66.0
Aqoxy3G03108 Aquilegia oxysepala HOM05D005581 ORTHO05D006792 5.5e-65 251.5 165 69.7
CARHR102620 Cardamine hirsuta HOM05D005581 ORTHO05D006792 7.1e-65 251.1 199 60.8
EL10Ac7g18000 Beta vulgaris HOM05D005581 ORTHO05D006792 9.3e-65 250.8 191 64.4
vmacro05787 Vaccinium macrocarpon HOM05D005581 ORTHO05D006792 1.6e-64 250.0 154 76.6
AL3G42310 Arabidopsis lyrata HOM05D005581 ORTHO05D006792 3.0e-63 245.7 171 67.3
Thhalv10027934m.g Eutrema salsugineum HOM05D005581 ORTHO05D006792 1.8e-60 236.5 175 63.4
Sp7g01930 Schrenkiella parvula HOM05D005581 ORTHO05D006792 9.0e-60 234.2 175 62.3
BraA04t16955Z Brassica rapa HOM05D005581 ORTHO05D006792 1.7e-58 229.9 170 63.5
BcaB06g27424 Brassica carinata HOM05D005581 ORTHO05D006792 2.2e-58 229.6 203 55.2
MD09G1040100 Malus domestica HOM05D005581 ORTHO05D006792 2.9e-58 229.2 312 43.6
SEGI_16176 Sequoiadendron giganteum HOM05D005581 ORTHO05D006792 2.9e-58 229.2 184 57.1
C04p46650 Brassica napus HOM05D005581 ORTHO05D006792 1.9e-57 226.5 170 62.4
BolC4t26253H Brassica oleracea HOM05D005581 ORTHO05D006792 1.9e-57 226.5 170 62.4
THA.LOC104823921 Tarenaya hassleriana HOM05D005581 ORTHO05D006792 5.5e-57 224.9 191 57.1
A04p12950 Brassica napus HOM05D005581 ORTHO05D006792 9.3e-57 224.2 170 62.4
Cc07_g02660 Coffea canephora HOM05D005581 ORTHO05D006792 9.3e-57 224.2 166 66.3
Atru.chr8.2410 Acer truncatum HOM05D005581 ORTHO05D006792 1.2e-56 223.8 129 78.3
SMO356G0730 Selaginella moellendorffii HOM05D005581 ORTHO05D006792 1.4e-52 210.3 170 58.2
AagrBONN_evm.TU.Sc2ySwM_368.1768 Anthoceros agrestis HOM05D005581 ORTHO05D006792 8.5e-50 201.1 173 55.5
Mapoly0035s0056 Marchantia polymorpha HOM05D005581 ORTHO05D006792 9.4e-49 197.6 193 47.7
Psat3g011960 Pisum sativum HOM05D005581 ORTHO05D006792 4.6e-48 195.3 141 70.2
Aa31LG9G1540 Aethionema arabicum HOM05D005581 ORTHO05D006792 2.3e-47 193.0 154 65.6
Haze_14640 Corylus avellana HOM05D005581 ORTHO05D006792 4.8e-45 185.3 154 63.6
Pp3c1_40840 Physcomitrium patens HOM05D005581 ORTHO05D006792 3.8e-42 175.6 164 51.2
MSTRG.21916 Avicennia marina HOM05D005581 ORTHO05D006792 6.1e-40 168.3 168 54.8
CBR_g36833 Chara braunii HOM05D005581 ORTHO05D006792 3.0e-39 166.0 185 44.9
Migut.N00270 Erythranthe guttata HOM05D005581 ORTHO05D006792 4.4e-38 162.2 168 50.6
Migut.H00162 Erythranthe guttata HOM05D005581 ORTHO05D006792 3.8e-34 149.1 159 47.2
Migut.H00166 Erythranthe guttata HOM05D005581 ORTHO05D006792 1.9e-33 146.7 166 45.8
PRCOL_00005184 Prasinoderma coloniale HOM05D005581 ORTHO05D006792 2.7e-32 142.9 172 41.3
Glyma.17G043600 Glycine max HOM05D005581 ORTHO05D006792 3.3e-30 136.0 79 75.9
Cre10.g440700 Chlamydomonas reinhardtii HOM05D005581 ORTHO05D006792 2.2e-29 133.3 196 34.2
SalBow3G2496 Salvia bowleyana HOM05D005581 ORTHO05D006792 1.8e-28 130.2 170 41.2
HPP92_018422 Vanilla planifolia HOM05D005581 ORTHO05D006792 2.2e-21 106.7 69 65.2
PRCOL_00002387 Prasinoderma coloniale HOM05D005581 ORTHO05D006792 5.5e-17 92.0 201 31.8
HanXRQChr17g0548091 Helianthus annuus HOM05D005581 ORTHO05D006792 2.2e-13 80.1 58 58.6
CDE06G0755 Ceratophyllum demersum HOM05D005581 ORTHO05D006792 7.0e-12 75.1 45 73.3
arahy.Tifrunner.gnm1.ann1.C3UJQ4 Arachis hypogaea HOM05D005581 ORTHO05D006792 3.5e-11 72.8 65 56.9
MBI15_g46244_MAGBIO Magnolia biondii HOM05D005581 ORTHO05D006792 2.1e-08 63.5 59 55.9


User provided reference genes

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