Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu062157.1 Olea europaea HOM05D007413 ORTHO05D009357 5.6e-50 200.7 104 100.0
Oeu010247.1 Olea europaea HOM05D007413 ORTHO05D009357 1.2e-23 113.2 93 65.6
Migut.K01283 Erythranthe guttata HOM05D007413 ORTHO05D009357 5.0e-22 107.8 107 61.7
Nitab4.5_0010051g0020 Nicotiana tabacum HOM05D007413 ORTHO05D009357 1.5e-18 96.3 102 53.9
Sopen02g033450 Solanum pennellii HOM05D007413 ORTHO05D009357 1.5e-18 96.3 97 53.6
CSS0018085 Camellia sinensis var. sinensis HOM05D007413 ORTHO05D009357 1.9e-18 95.9 103 54.4
Nitab4.5_0000565g0230 Nicotiana tabacum HOM05D007413 ORTHO05D009357 1.9e-18 95.9 110 56.4
Oeu007062.1 Olea europaea HOM05D007413 ORTHO05D009357 3.3e-18 95.1 111 57.7
CSS0009905 Camellia sinensis var. sinensis HOM05D007413 ORTHO05D009357 4.3e-18 94.7 103 53.4
Solyc02g088740.1 Solanum lycopersicum HOM05D007413 ORTHO05D009357 4.3e-18 94.7 97 53.6
CAN.G206.219 Capsicum annuum HOM05D007413 ORTHO05D009357 9.7e-18 93.6 68 69.1
Migut.H00635 Erythranthe guttata HOM05D007413 ORTHO05D009357 6.3e-17 90.9 100 59.0
SGA_v2.0_scaffold148G36473 Striga asiatica HOM05D007413 ORTHO05D009357 1.1e-16 90.1 96 55.2
Sopen02g016170 Solanum pennellii HOM05D007413 ORTHO05D009357 1.4e-16 89.7 108 49.1
Potri.017G093000 Populus trichocarpa HOM05D007413 ORTHO05D009357 1.8e-16 89.4 110 52.7
Cfa007655 Carpinus fangiana HOM05D007413 ORTHO05D009357 2.4e-16 89.0 84 60.7
Lj2g0007962 Lotus japonicus HOM05D007413 ORTHO05D009357 2.4e-16 89.0 61 72.1
SalBow1G0329 Salvia bowleyana HOM05D007413 ORTHO05D009357 2.4e-16 89.0 99 55.6
Hma1.2p1_0481F.1_g162070 Hydrangea macrophylla HOM05D007413 ORTHO05D009357 3.1e-16 88.6 60 75.0
SalBow1G6503 Salvia bowleyana HOM05D007413 ORTHO05D009357 4.1e-16 88.2 53 79.2
Potri.004G119600 Populus trichocarpa HOM05D007413 ORTHO05D009357 6.9e-16 87.4 96 55.2
PGSC0003DMG400025144 Solanum tuberosum HOM05D007413 ORTHO05D009357 6.9e-16 87.4 108 48.1
SGA_v2.0_scaffold52G19169 Striga asiatica HOM05D007413 ORTHO05D009357 6.9e-16 87.4 75 60.0
CANSAT64G0406 Cannabis sativa HOM05D007413 ORTHO05D009357 9.0e-16 87.0 103 53.4
Solyc02g066970.1 Solanum lycopersicum HOM05D007413 ORTHO05D009357 1.2e-15 86.7 109 48.6
Actinidia26249 Actinidia chinensis HOM05D007413 ORTHO05D009357 3.4e-15 85.1 80 58.8
Manes.02G054200 Manihot esculenta HOM05D007413 ORTHO05D009357 4.5e-15 84.7 93 57.0
Aqoxy3G03598 Aquilegia oxysepala HOM05D007413 ORTHO05D009357 5.9e-15 84.3 97 56.7
Manes.01G097200 Manihot esculenta HOM05D007413 ORTHO05D009357 7.7e-15 84.0 96 58.3
QL02p067998 Quercus lobata HOM05D007413 ORTHO05D009357 7.7e-15 84.0 75 64.0
Cc07_g04120 Coffea canephora HOM05D007413 ORTHO05D009357 1.3e-14 83.2 98 54.1
Sabra17G0082000 Salix brachista HOM05D007413 ORTHO05D009357 5.0e-14 81.3 105 50.5
CSS0018963 Camellia sinensis var. sinensis HOM05D007413 ORTHO05D009357 2.5e-13 79.0 100 48.0
CAN.G398.10 Capsicum annuum HOM05D007413 ORTHO05D009357 3.2e-13 78.6 87 49.4
Lalb_Chr02g0158971 Lupinus albus HOM05D007413 ORTHO05D009357 4.2e-13 78.2 62 67.7
Glyma.13G057000 Glycine max HOM05D007413 ORTHO05D009357 5.5e-13 77.8 94 47.9
VMungo0464G1276 Vigna mungo HOM05D007413 ORTHO05D009357 1.2e-12 76.6 95 48.4
CiPaw.03G089400 Carya illinoinensis HOM05D007413 ORTHO05D009357 2.1e-12 75.9 99 52.5
Lalb_Chr06g0174991 Lupinus albus HOM05D007413 ORTHO05D009357 2.7e-12 75.5 53 69.8
Sabra04G0069100 Salix brachista HOM05D007413 ORTHO05D009357 2.7e-12 75.5 79 58.2
Lsat_1_v5_gn_2_87601 Lactuca sativa HOM05D007413 ORTHO05D009357 4.6e-12 74.7 104 47.1
Nitab4.5_0005916g0020 Nicotiana tabacum HOM05D007413 ORTHO05D009357 4.6e-12 74.7 80 56.2
Phvul.004G035200 Phaseolus vulgaris HOM05D007413 ORTHO05D009357 4.6e-12 74.7 98 46.9
Nn3g17420 Nelumbo nucifera HOM05D007413 ORTHO05D009357 6.1e-12 74.3 100 43.0
Ciclev10013609m.g Citrus clementina HOM05D007413 ORTHO05D009357 7.9e-12 73.9 74 58.1
Medtr6g015150 Medicago truncatula HOM05D007413 ORTHO05D009357 7.9e-12 73.9 56 62.5
unitig_62.g23378 Utricularia gibba HOM05D007413 ORTHO05D009357 7.9e-12 73.9 100 47.0
MD09G1064600 Malus domestica HOM05D007413 ORTHO05D009357 1.4e-11 73.2 88 51.1
FAN02G2783 Fragaria x ananassa HOM05D007413 ORTHO05D009357 3.0e-11 72.0 104 46.2
TPR.G10008 Trifolium pratense HOM05D007413 ORTHO05D009357 3.0e-11 72.0 96 46.9
MELO3C022028.2 Cucumis melo HOM05D007413 ORTHO05D009357 5.1e-11 71.2 87 50.6
MD17G1057900 Malus domestica HOM05D007413 ORTHO05D009357 5.1e-11 71.2 107 45.8
Psat1g067640 Pisum sativum HOM05D007413 ORTHO05D009357 5.1e-11 71.2 96 45.8
FvH4_6g47010 Fragaria vesca HOM05D007413 ORTHO05D009357 8.8e-11 70.5 104 46.2
FAN14G4532 Fragaria x ananassa HOM05D007413 ORTHO05D009357 8.8e-11 70.5 104 46.2
Nn4g23392 Nelumbo nucifera HOM05D007413 ORTHO05D009357 8.8e-11 70.5 105 41.0
CDE10G0699 Ceratophyllum demersum HOM05D007413 ORTHO05D009357 1.1e-10 70.1 84 48.8
FAN09G1793 Fragaria x ananassa HOM05D007413 ORTHO05D009357 2.0e-10 69.3 102 46.1
Prupe.3G256400 Prunus persica HOM05D007413 ORTHO05D009357 2.0e-10 69.3 59 62.7
ClCG11G004700 Citrullus lanatus HOM05D007413 ORTHO05D009357 2.5e-10 68.9 96 44.8
Lsat_1_v5_gn_4_171221 Lactuca sativa HOM05D007413 ORTHO05D009357 2.5e-10 68.9 109 48.6
Thecc.04G093400 Theobroma cacao HOM05D007413 ORTHO05D009357 3.3e-10 68.6 62 58.1
Cpa.g.sc3362.1 Carica papaya HOM05D007413 ORTHO05D009357 4.3e-10 68.2 58 62.1
FAN05G2048 Fragaria x ananassa HOM05D007413 ORTHO05D009357 4.3e-10 68.2 102 46.1
Gorai.012G049200 Gossypium raimondii HOM05D007413 ORTHO05D009357 4.3e-10 68.2 70 51.4
Eucgr.I02025 Eucalyptus grandis HOM05D007413 ORTHO05D009357 7.4e-10 67.4 81 51.9
Sed0019528 Sechium edule HOM05D007413 ORTHO05D009357 7.4e-10 67.4 63 60.3
TWI34G0597 Tripterygium wilfordii HOM05D007413 ORTHO05D009357 7.4e-10 67.4 100 45.0
Gohir.D04G043900 Gossypium hirsutum HOM05D007413 ORTHO05D009357 1.3e-09 66.6 65 53.8
Gohir.A05G371900 Gossypium hirsutum HOM05D007413 ORTHO05D009357 1.7e-09 66.2 70 50.0
CDE10G0216 Ceratophyllum demersum HOM05D001577 ORTHO05D008017 2.2e-09 65.9 100 41.0
ClCG07G007410 Citrullus lanatus HOM05D007413 ORTHO05D009357 2.2e-09 65.9 91 49.5
THA.LOC104825781 Tarenaya hassleriana HOM05D007413 ORTHO05D009357 2.8e-09 65.5 95 42.1
MELO3C024851.2 Cucumis melo HOM05D007413 ORTHO05D009357 3.7e-09 65.1 86 48.8
Rhsim08G0074700 Rhododendron simsii HOM05D007413 ORTHO05D009357 3.7e-09 65.1 39 87.2
Sp7g02750 Schrenkiella parvula HOM05D007413 ORTHO05D009357 3.7e-09 65.1 106 42.5
Duzib147G0133 Durio zibethinus HOM05D007413 ORTHO05D009357 6.3e-09 64.3 68 54.4
RcHm_v2.0_Chr2g0166071 Rosa chinensis HOM05D007413 ORTHO05D009357 6.3e-09 64.3 104 43.3
Lalb_Chr21g0318381 Lupinus albus HOM05D007413 ORTHO05D009357 8.2e-09 63.9 61 62.3
COL.COLO4_00052 Corchorus olitorius HOM05D007413 ORTHO05D009357 1.1e-08 63.5 60 61.7
THA.LOC109116393 Tarenaya hassleriana HOM05D007413 ORTHO05D009357 1.1e-08 63.5 90 45.6
AT5G39240 Arabidopsis thaliana HOM05D007413 ORTHO05D009357 1.4e-08 63.2 105 46.7
A04p11950 Brassica napus HOM05D007413 ORTHO05D009357 1.4e-08 63.2 106 39.6
BraA04t16860Z Brassica rapa HOM05D007413 ORTHO05D009357 1.4e-08 63.2 106 39.6
TAR629G1767 Trochodendron aralioides HOM05D007413 ORTHO05D009357 1.4e-08 63.2 44 68.2
BcaB06g27281 Brassica carinata HOM05D007413 ORTHO05D009357 2.4e-08 62.4 79 46.8
PGR004G0469 Punica granatum HOM05D007413 ORTHO05D009357 3.1e-08 62.0 77 44.2
Aa31LG2G3920 Aethionema arabicum HOM05D007413 ORTHO05D009357 5.3e-08 61.2 106 37.7
CARHR263170 Cardamine hirsuta HOM05D007413 ORTHO05D009357 5.3e-08 61.2 77 45.5
ATR0064G025 Amborella trichopoda HOM05D007413 ORTHO05D009357 6.9e-08 60.8 74 45.9
BcaC02g09685 Brassica carinata HOM05D007413 ORTHO05D009357 6.9e-08 60.8 113 38.1
C04p45600 Brassica napus HOM05D007413 ORTHO05D009357 6.9e-08 60.8 113 38.1
BolC4t26142H Brassica oleracea HOM05D007413 ORTHO05D009357 6.9e-08 60.8 113 38.1
Carub.0007s3668 Capsella rubella HOM05D007413 ORTHO05D009357 9.1e-08 60.5 92 44.6
AL7G51220 Arabidopsis lyrata HOM05D007413 ORTHO05D009357 2.6e-07 58.9 105 37.1
Thhalv10027993m.g Eutrema salsugineum HOM05D007413 ORTHO05D009357 2.6e-07 58.9 78 44.9
DCAR_011043 Daucus carota HOM05D007413 ORTHO05D009357 4.5e-07 58.2 100 39.0
AL5G19460 Arabidopsis lyrata HOM05D007413 ORTHO05D009357 5.9e-07 57.8 89 44.9
Aa31LG9G16690 Aethionema arabicum HOM05D007413 ORTHO05D009357 1.3e-06 56.6 85 43.5
AT3G29370 Arabidopsis thaliana HOM05D007413 ORTHO05D009357 2.9e-06 55.5 87 41.4
Sc14g0006230 Simmondsia chinensis HOM05D007413 ORTHO05D009357 2.9e-06 55.5 83 44.6
HPP92_023631 Vanilla planifolia HOM05D007413 ORTHO05D009357 3.8e-06 55.1 103 37.9
Carub.0005s0809 Capsella rubella HOM05D007413 ORTHO05D009357 5.0e-06 54.7 91 38.5


User provided reference genes

Program Settings