Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu062031.1 Olea europaea HOM05D003442 ORTHO05D004005 5.1e-90 334.3 164 100.0
Oeu007683.1 Olea europaea HOM05D003442 ORTHO05D004005 6.1e-67 257.7 149 84.6
Dinv17142 Davidia involucrata HOM05D003442 ORTHO05D004005 4.0e-66 255.0 142 90.1
Prupe.2G328400 Prunus persica HOM05D003442 ORTHO05D004005 7.5e-65 250.8 142 88.0
Duzib177G0664 Durio zibethinus HOM05D003442 ORTHO05D004005 1.3e-64 250.0 142 86.6
Thecc.05G221300 Theobroma cacao HOM05D003442 ORTHO05D004005 1.3e-64 250.0 142 83.8
MD01G1238500 Malus domestica HOM05D003442 ORTHO05D004005 6.3e-64 247.7 142 87.3
COL.COLO4_15183 Corchorus olitorius HOM05D003442 ORTHO05D004005 1.1e-63 246.9 140 87.9
MD07G1310400 Malus domestica HOM05D003442 ORTHO05D004005 1.1e-63 246.9 142 88.7
Migut.F01837 Erythranthe guttata HOM05D003442 ORTHO05D004005 7.0e-63 244.2 141 86.5
Cfa016067 Carpinus fangiana HOM05D003442 ORTHO05D004005 9.1e-63 243.8 140 82.9
Gohir.A08G221656 Gossypium hirsutum HOM05D003442 ORTHO05D004005 1.2e-62 243.4 140 82.9
Duzib106G0604 Durio zibethinus HOM05D003442 ORTHO05D004005 1.6e-62 243.0 142 81.7
Manes.09G128600 Manihot esculenta HOM05D003442 ORTHO05D004005 2.7e-62 242.3 142 83.8
Peaxi162Scf01313g00235 Petunia axillaris HOM05D003442 ORTHO05D004005 3.5e-62 241.9 144 82.6
Haze_00382 Corylus avellana HOM05D003442 ORTHO05D004005 4.5e-62 241.5 154 77.9
Gorai.003G056300 Gossypium raimondii HOM05D003442 ORTHO05D004005 4.5e-62 241.5 149 80.5
MSTRG.8187 Avicennia marina HOM05D003442 ORTHO05D004005 7.7e-62 240.7 141 83.0
Gohir.D08G241000 Gossypium hirsutum HOM05D003442 ORTHO05D004005 7.7e-62 240.7 140 82.1
Nitab4.5_0003759g0020 Nicotiana tabacum HOM05D003442 ORTHO05D004005 7.7e-62 240.7 143 82.5
RcHm_v2.0_Chr1g0384521 Rosa chinensis HOM05D003442 ORTHO05D004005 7.7e-62 240.7 141 85.1
Cpa.g.sc43.106 Carica papaya HOM05D003442 ORTHO05D004005 1.0e-61 240.4 142 81.0
Glyma.02G059800 Glycine max HOM05D003442 ORTHO05D004005 1.0e-61 240.4 142 81.7
Gorai.004G256400 Gossypium raimondii HOM05D003442 ORTHO05D004005 1.3e-61 240.0 137 83.2
QL09p021203 Quercus lobata HOM05D003442 ORTHO05D004005 1.3e-61 240.0 146 78.8
FAN03G3412 Fragaria x ananassa HOM05D003442 ORTHO05D004005 1.7e-61 239.6 141 85.1
FAN10G2135 Fragaria x ananassa HOM05D003442 ORTHO05D004005 1.7e-61 239.6 141 85.1
SGA_v2.0_scaffold83G26364 Striga asiatica HOM05D003442 ORTHO05D004005 1.7e-61 239.6 143 82.5
Glyma.16G142600 Glycine max HOM05D003442 ORTHO05D004005 2.2e-61 239.2 142 81.7
Nn7g37514 Nelumbo nucifera HOM05D003442 ORTHO05D004005 2.2e-61 239.2 142 82.4
GSVIVG01024344001 Vitis vinifera HOM05D003442 ORTHO05D004005 2.2e-61 239.2 140 81.4
Manes.08G064200 Manihot esculenta HOM05D003442 ORTHO05D004005 3.8e-61 238.4 142 82.4
ATR0743G255 Amborella trichopoda HOM05D003442 ORTHO05D004005 5.0e-61 238.0 145 77.2
FvH4_7g34170 Fragaria vesca HOM05D003442 ORTHO05D004005 5.0e-61 238.0 141 84.4
FAN01G2089 Fragaria x ananassa HOM05D003442 ORTHO05D004005 5.0e-61 238.0 141 84.4
Gohir.D03G053800 Gossypium hirsutum HOM05D003442 ORTHO05D004005 5.0e-61 238.0 142 83.1
VMungo0251G1146 Vigna mungo HOM05D003442 ORTHO05D004005 5.0e-61 238.0 140 82.1
Cc09_g04230 Coffea canephora HOM05D003442 ORTHO05D004005 8.5e-61 237.3 139 82.7
Nitab4.5_0002329g0200 Nicotiana tabacum HOM05D003442 ORTHO05D004005 1.5e-60 236.5 142 81.0
Potri.019G047800 Populus trichocarpa HOM05D003442 ORTHO05D004005 4.2e-60 235.0 142 82.4
AL5G22780 Arabidopsis lyrata HOM05D003442 ORTHO05D004005 5.5e-60 234.6 142 78.9
Carub.0007s0621 Capsella rubella HOM05D003442 ORTHO05D004005 7.2e-60 234.2 142 79.6
Lalb_Chr09g0333641 Lupinus albus HOM05D003442 ORTHO05D004005 9.4e-60 233.8 143 76.2
CAN.G1610.2 Capsicum annuum HOM05D003442 ORTHO05D004005 1.2e-59 233.4 142 80.3
Potri.013G078700 Populus trichocarpa HOM05D003442 ORTHO05D004005 1.2e-59 233.4 142 83.1
TWI60G0615 Tripterygium wilfordii HOM05D003442 ORTHO05D004005 1.2e-59 233.4 142 78.2
Actinidia31263 Actinidia chinensis HOM05D003442 ORTHO05D004005 1.6e-59 233.0 142 81.0
PGR142G0137 Punica granatum HOM05D003442 ORTHO05D004005 2.1e-59 232.6 142 79.6
PGSC0003DMG401011206 Solanum tuberosum HOM05D003442 ORTHO05D004005 2.1e-59 232.6 142 80.3
Gohir.A02G127200 Gossypium hirsutum HOM05D003442 ORTHO05D004005 2.7e-59 232.3 142 81.7
Aqoxy2G01953 Aquilegia oxysepala HOM05D003442 ORTHO05D004005 3.6e-59 231.9 140 79.3
arahy.Tifrunner.gnm1.ann1.CZ7R53 Arachis hypogaea HOM05D003442 ORTHO05D004005 3.6e-59 231.9 152 76.3
Lj2C606G3 Lonicera japonica HOM05D003442 ORTHO05D004005 4.7e-59 231.5 142 80.3
CANSAT21G2378 Cannabis sativa HOM05D003442 ORTHO05D004005 6.1e-59 231.1 142 81.7
MELO3C009742.2 Cucumis melo HOM05D003442 ORTHO05D004005 8.0e-59 230.7 142 81.7
THA.LOC104819563 Tarenaya hassleriana HOM05D003442 ORTHO05D004005 8.0e-59 230.7 142 76.8
Atru.chr12.1913 Acer truncatum HOM05D003442 ORTHO05D004005 1.4e-58 229.9 134 82.8
CsaV3_3G040000 Cucumis sativus L. HOM05D003442 ORTHO05D004005 1.8e-58 229.6 142 78.9
Sed0014541 Sechium edule HOM05D003442 ORTHO05D004005 1.8e-58 229.6 142 77.5
Thhalv10025183m.g Eutrema salsugineum HOM05D003442 ORTHO05D004005 2.3e-58 229.2 142 79.6
SGA_v2.0_scaffold122G33217 Striga asiatica HOM05D003442 ORTHO05D004005 2.3e-58 229.2 134 83.6
THA.LOC104804387 Tarenaya hassleriana HOM05D003442 ORTHO05D004005 3.0e-58 228.8 142 78.9
AT3G42050 Arabidopsis thaliana HOM05D003442 ORTHO05D004005 4.0e-58 228.4 140 79.3
Sopen07g002070 Solanum pennellii HOM05D003442 ORTHO05D004005 4.0e-58 228.4 142 78.9
PGR042G1782 Punica granatum HOM05D003442 ORTHO05D004005 5.2e-58 228.0 141 78.0
Rhsim05G0022700 Rhododendron simsii HOM05D003442 ORTHO05D004005 5.2e-58 228.0 140 77.1
CSS0045568 Camellia sinensis var. sinensis HOM05D003442 ORTHO05D004005 6.8e-58 227.6 141 80.1
PSO675G6803 Papaver somniferum HOM05D003442 ORTHO05D004005 6.8e-58 227.6 143 79.0
Sc16g0010680 Simmondsia chinensis HOM05D003442 ORTHO05D004005 6.8e-58 227.6 141 77.3
Solyc12g009890.3 Solanum lycopersicum HOM05D003442 ORTHO05D004005 6.8e-58 227.6 142 77.5
vmacro12087 Vaccinium macrocarpon HOM05D003442 ORTHO05D004005 6.8e-58 227.6 142 78.9
A01p04260 Brassica napus HOM05D003442 ORTHO05D004005 1.2e-57 226.9 142 77.5
BraA01t00415Z Brassica rapa HOM05D003442 ORTHO05D004005 1.2e-57 226.9 142 77.5
CiPaw.05G214600 Carya illinoinensis HOM05D003442 ORTHO05D004005 1.2e-57 226.9 142 74.6
ClCG10G016340 Citrullus lanatus HOM05D003442 ORTHO05D004005 1.2e-57 226.9 143 80.4
Medtr8g078370 Medicago truncatula HOM05D003442 ORTHO05D004005 1.2e-57 226.9 139 79.1
TWI32G0704 Tripterygium wilfordii HOM05D003442 ORTHO05D004005 1.2e-57 226.9 143 77.6
TAR636G2465 Trochodendron aralioides HOM05D003442 ORTHO05D004005 1.2e-57 226.9 134 83.6
Lj4A843G12 Lonicera japonica HOM05D003442 ORTHO05D004005 1.5e-57 226.5 142 78.9
Sed0022579 Sechium edule HOM05D003442 ORTHO05D004005 1.5e-57 226.5 142 77.5
Sc09g0001320 Simmondsia chinensis HOM05D003442 ORTHO05D004005 1.5e-57 226.5 149 73.2
Lj2g0002798 Lotus japonicus HOM05D003442 ORTHO05D004005 2.6e-57 225.7 133 84.2
Solyc07g005940.4 Solanum lycopersicum HOM05D003442 ORTHO05D004005 2.6e-57 225.7 142 78.2
Migut.F02084 Erythranthe guttata HOM05D003442 ORTHO05D004005 3.4e-57 225.3 141 79.4
Lj4g0025932 Lotus japonicus HOM05D003442 ORTHO05D004005 3.4e-57 225.3 139 78.4
Sp7g31930 Schrenkiella parvula HOM05D003442 ORTHO05D004005 4.4e-57 224.9 141 79.4
Nitab4.5_0006810g0020 Nicotiana tabacum HOM05D003442 ORTHO05D004005 5.7e-57 224.6 135 80.0
Sopen12g004770 Solanum pennellii HOM05D003442 ORTHO05D004005 7.5e-57 224.2 142 77.5
Hund07385 Selenicereus undatus HOM05D003442 ORTHO05D004005 9.8e-57 223.8 154 72.7
A03p62660 Brassica napus HOM05D003442 ORTHO05D004005 1.3e-56 223.4 142 78.9
BraA03t15336Z Brassica rapa HOM05D003442 ORTHO05D004005 1.3e-56 223.4 141 78.7
C07p60210 Brassica napus HOM05D003442 ORTHO05D004005 2.2e-56 222.6 142 78.2
BolC7t46462H Brassica oleracea HOM05D003442 ORTHO05D004005 2.2e-56 222.6 142 78.2
Ciclev10031531m.g Citrus clementina HOM05D003442 ORTHO05D004005 2.2e-56 222.6 134 83.6
BcaNung03800 Brassica carinata HOM05D003442 ORTHO05D004005 2.8e-56 222.2 142 76.8
C01p04650 Brassica napus HOM05D003442 ORTHO05D004005 2.8e-56 222.2 142 76.8
BolC1t00448H Brassica oleracea HOM05D003442 ORTHO05D004005 2.8e-56 222.2 142 76.8
Eucgr.H02340 Eucalyptus grandis HOM05D003442 ORTHO05D004005 2.8e-56 222.2 132 82.6
HanXRQChr13g0401211 Helianthus annuus HOM05D003442 ORTHO05D004005 2.8e-56 222.2 142 78.2
PGSC0003DMG400007911 Solanum tuberosum HOM05D003442 ORTHO05D004005 2.8e-56 222.2 142 76.8
Lalb_Chr05g0227421 Lupinus albus HOM05D003442 ORTHO05D004005 3.7e-56 221.9 145 75.2
PSO017G5499 Papaver somniferum HOM05D003442 ORTHO05D004005 4.8e-56 221.5 143 78.3
BcaNung03365 Brassica carinata HOM05D003442 ORTHO05D004005 6.3e-56 221.1 141 77.3
ECA233G0769 Erigeron canadensis HOM05D003442 ORTHO05D004005 1.1e-55 220.3 140 79.3
Lsat_1_v5_gn_6_25940 Lactuca sativa HOM05D003442 ORTHO05D004005 1.1e-55 220.3 142 77.5
Psat4g090760 Pisum sativum HOM05D003442 ORTHO05D004005 1.1e-55 220.3 140 76.4
BcaB03g11847 Brassica carinata HOM05D003442 ORTHO05D004005 2.4e-55 219.2 140 75.7
SalBow1G3564 Salvia bowleyana HOM05D003442 ORTHO05D004005 7.0e-55 217.6 141 75.2
unitig_61.g26274 Utricularia gibba HOM05D003442 ORTHO05D004005 9.1e-55 217.2 147 73.5
Rhsim09G0020400 Rhododendron simsii HOM05D003442 ORTHO05D004005 1.2e-54 216.9 140 74.3
HPP92_007347 Vanilla planifolia HOM05D003442 ORTHO05D004005 1.2e-54 216.9 142 76.8
SalBow1G1076 Salvia bowleyana HOM05D003442 ORTHO05D004005 2.7e-54 215.7 139 75.5
DCAR_002085 Daucus carota HOM05D003442 ORTHO05D004005 3.5e-54 215.3 140 75.0
Actinidia07920 Actinidia chinensis HOM05D003442 ORTHO05D004005 5.0e-53 211.5 150 74.0
CDE04G1479 Ceratophyllum demersum HOM05D003442 ORTHO05D004005 6.5e-53 211.1 143 70.6
PSO675G6576 Papaver somniferum HOM05D003442 ORTHO05D004005 3.3e-52 208.8 143 70.6
Zm00001eb323620 Zea mays HOM05D003442 ORTHO05D004005 5.5e-52 208.0 142 67.6
CDE02G3771 Ceratophyllum demersum HOM05D003442 ORTHO05D004005 4.7e-51 204.9 141 68.8
SEGI_25036 Sequoiadendron giganteum HOM05D003442 ORTHO05D004005 5.7e-49 198.0 139 70.5
BcaC01g00920 Brassica carinata HOM05D003442 ORTHO05D004005 4.9e-48 194.9 142 70.4
C03p85940 Brassica napus HOM05D003442 ORTHO05D004005 7.0e-47 191.0 130 73.1
DCAR_023762 Daucus carota HOM05D003442 ORTHO05D004005 1.2e-46 190.3 167 58.1
Peaxi162Scf00062g00013 Petunia axillaris HOM05D003442 ORTHO05D004005 2.0e-46 189.5 120 77.5
ATR0794G033 Amborella trichopoda HOM05D003442 ORTHO05D004005 2.7e-46 189.1 131 67.9
arahy.Tifrunner.gnm1.ann1.K5ZCN3 Arachis hypogaea HOM05D003442 ORTHO05D004005 4.5e-46 188.3 115 80.9
CARHR242670 Cardamine hirsuta HOM05D003442 ORTHO05D004005 4.5e-46 188.3 119 76.5
Aqoxy6G03064 Aquilegia oxysepala HOM05D003442 ORTHO05D004005 1.0e-45 187.2 117 77.8
SalBow3G0476 Salvia bowleyana HOM05D003442 ORTHO05D004005 5.0e-45 184.9 126 76.2
MBI07_g36707_MAGBIO Magnolia biondii HOM05D003442 ORTHO05D004005 6.6e-45 184.5 112 80.4
Aa31LG2G16640 Aethionema arabicum HOM05D003442 ORTHO05D004005 1.1e-44 183.7 222 48.6
Nitab4.5_0008310g0020 Nicotiana tabacum HOM05D003442 ORTHO05D004005 1.9e-44 183.0 120 75.0
MBI07_g38305_MAGBIO Magnolia biondii HOM05D003442 ORTHO05D004005 3.3e-44 182.2 112 79.5
SGA_v2.0_scaffold340G49316 Striga asiatica HOM05D003442 ORTHO05D007315 9.5e-44 180.6 140 65.0
SHI02588 Sapria himalayana HOM05D000002 ORTHO05D000001 6.1e-43 177.9 169 56.2
EL10Ac4g10031 Beta vulgaris HOM05D003442 ORTHO05D004005 1.4e-42 176.8 133 69.2
AUR62006614 Chenopodium quinoa HOM05D003442 ORTHO05D004005 1.2e-41 173.7 129 69.8
AUR62000266 Chenopodium quinoa HOM05D003442 ORTHO05D004005 2.0e-41 172.9 130 69.2
A08p17030 Brassica napus HOM05D003442 ORTHO05D004005 1.7e-40 169.9 142 63.4
BraA08t33665Z Brassica rapa HOM05D003442 ORTHO05D004005 1.7e-40 169.9 142 63.4
Rhsim04G0133200 Rhododendron simsii HOM05D003442 ORTHO05D004005 1.1e-39 167.2 121 70.2
AagrBONN_evm.TU.Sc2ySwM_344.2700 Anthoceros agrestis HOM05D003442 ORTHO05D004005 2.4e-39 166.0 138 58.0
Zm00001eb106630 Zea mays HOM05D003442 ORTHO05D004005 5.4e-39 164.9 120 65.0
CANSAT56G1635 Cannabis sativa HOM05D003442 ORTHO05D004005 2.7e-38 162.5 144 61.8
Pp3c1_26980 Physcomitrium patens HOM05D003442 ORTHO05D004005 2.3e-37 159.5 140 54.3
SMO361G0576 Selaginella moellendorffii HOM05D003442 ORTHO05D004005 3.0e-37 159.1 138 55.8
Hund21933 Selenicereus undatus HOM05D003442 ORTHO05D004005 8.6e-37 157.5 134 59.7
CANSAT35G0024 Cannabis sativa HOM05D003442 ORTHO05D004005 1.9e-36 156.4 142 59.2
Pp3c10_2890 Physcomitrium patens HOM05D003442 ORTHO05D004005 5.6e-36 154.8 136 54.4
Mapoly0102s0002 Marchantia polymorpha HOM05D003442 ORTHO05D004005 7.3e-36 154.5 147 55.8
Ca_22246_v3 Cicer arietinum L. HOM05D003442 ORTHO05D004005 1.8e-34 149.8 79 89.9
Oeu001224.1 Olea europaea HOM05D003442 ORTHO05D004005 1.2e-33 147.1 82 85.4
TAR365G0691 Trochodendron aralioides HOM05D003442 ORTHO05D004005 5.8e-33 144.8 79 87.3
CBR_g3526 Chara braunii HOM05D003442 ORTHO05D004005 1.1e-28 130.6 137 47.4
CANSAT35G0263 Cannabis sativa HOM05D003442 ORTHO05D004005 1.9e-28 129.8 96 67.7
Ah.04g159350 Amaranthus hybridus HOM05D003442 ORTHO05D004005 2.1e-27 126.3 90 71.1
AagrBONN_evm.TU.Sc2ySwM_368.2763 Anthoceros agrestis HOM05D003442 ORTHO05D004005 5.2e-26 121.7 139 41.7
AL7G17200 Arabidopsis lyrata HOM05D003442 ORTHO05D004005 3.4e-25 119.0 120 53.3
Nitab4.5_0009666g0010 Nicotiana tabacum HOM05D008541 ORTHO05D010458 1.1e-18 97.4 65 73.8
Cre01.g027800 Chlamydomonas reinhardtii HOM05D003442 ORTHO05D004005 2.9e-16 89.4 132 37.1
MCO09G349 Micromonas commoda HOM05D003442 ORTHO05D004005 7.8e-14 81.3 143 30.8
PRCOL_00001521 Prasinoderma coloniale HOM05D003442 ORTHO05D004005 9.0e-10 67.8 158 29.1
FAN08G1651 Fragaria x ananassa HOM05D003442 ORTHO05D004005 8.4e-08 61.2 48 60.4
FAN18G0534 Fragaria x ananassa HOM05D003442 ORTHO05D004005 8.4e-08 61.2 48 60.4


User provided reference genes

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