Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu061954.1 Olea europaea HOM05D006883 ORTHO05D008624 1.7e-54 215.7 104 100.0
Oeu044787.1 Olea europaea HOM05D006883 ORTHO05D008624 6.4e-38 160.6 121 70.2
Ciclev10005043m.g Citrus clementina HOM05D006883 ORTHO05D008624 1.0e-35 153.3 121 66.1
Manes.15G016500 Manihot esculenta HOM05D006883 ORTHO05D008624 1.0e-35 153.3 121 63.6
QL06p007513 Quercus lobata HOM05D006883 ORTHO05D008624 1.0e-35 153.3 121 65.3
TAR633G1607 Trochodendron aralioides HOM05D006883 ORTHO05D008624 1.0e-35 153.3 121 65.3
Aqoxy2G03105 Aquilegia oxysepala HOM05D006883 ORTHO05D008624 1.3e-35 152.9 121 65.3
COL.COLO4_13924 Corchorus olitorius HOM05D006883 ORTHO05D008624 1.3e-35 152.9 121 65.3
Peaxi162Scf00386g00096 Petunia axillaris HOM05D006883 ORTHO05D008624 1.3e-35 152.9 120 66.7
CiPaw.02G086300 Carya illinoinensis HOM05D006883 ORTHO05D008624 1.8e-35 152.5 121 65.3
Dinv38322 Davidia involucrata HOM05D006883 ORTHO05D008624 1.8e-35 152.5 121 64.5
Thecc.04G278100 Theobroma cacao HOM05D006883 ORTHO05D008624 2.3e-35 152.1 121 64.5
FvH4_4g17240 Fragaria vesca HOM05D006883 ORTHO05D008624 3.0e-35 151.8 121 66.1
FAN12G0993 Fragaria x ananassa HOM05D006883 ORTHO05D008624 3.0e-35 151.8 121 66.1
FAN12G3260 Fragaria x ananassa HOM05D006883 ORTHO05D008624 3.0e-35 151.8 121 66.1
FAN17G0491 Fragaria x ananassa HOM05D006883 ORTHO05D008624 3.0e-35 151.8 121 66.1
FAN22G2222 Fragaria x ananassa HOM05D006883 ORTHO05D008624 3.0e-35 151.8 121 66.1
Gorai.011G186200 Gossypium raimondii HOM05D006883 ORTHO05D008624 3.0e-35 151.8 121 64.5
Potri.008G204900 Populus trichocarpa HOM05D006883 ORTHO05D008624 3.0e-35 151.8 121 66.1
RcHm_v2.0_Chr4g0421151 Rosa chinensis HOM05D006883 ORTHO05D008624 3.0e-35 151.8 121 64.5
MD13G1173600 Malus domestica HOM05D006883 ORTHO05D008624 3.9e-35 151.4 121 64.5
Sabra08G0157100 Salix brachista HOM05D006883 ORTHO05D008624 3.9e-35 151.4 121 66.1
Cfa015347 Carpinus fangiana HOM05D006883 ORTHO05D008624 5.1e-35 151.0 121 64.5
Cc03_g02320 Coffea canephora HOM05D006883 ORTHO05D008624 5.1e-35 151.0 121 65.3
Haze_01264 Corylus avellana HOM05D006883 ORTHO05D008624 5.1e-35 151.0 121 64.5
Glyma.15G097700 Glycine max HOM05D006883 ORTHO05D008624 5.1e-35 151.0 121 63.6
Gohir.A10G101275 Gossypium hirsutum HOM05D006883 ORTHO05D008624 6.7e-35 150.6 121 63.6
Sed0024317 Sechium edule HOM05D006883 ORTHO05D008624 8.7e-35 150.2 121 63.6
Solyc01g067290.3 Solanum lycopersicum HOM05D006883 ORTHO05D008624 8.7e-35 150.2 120 65.0
Nn4g26002 Nelumbo nucifera HOM05D006883 ORTHO05D008624 1.1e-34 149.8 120 65.0
Nitab4.5_0000829g0010 Nicotiana tabacum HOM05D006883 ORTHO05D008624 1.1e-34 149.8 120 65.0
Nitab4.5_0002986g0100 Nicotiana tabacum HOM05D006883 ORTHO05D008624 1.1e-34 149.8 120 65.0
Sopen01g029090 Solanum pennellii HOM05D006883 ORTHO05D008624 1.1e-34 149.8 120 65.0
PGSC0003DMG400022678 Solanum tuberosum HOM05D006883 ORTHO05D008624 1.1e-34 149.8 120 65.0
Actinidia40226 Actinidia chinensis HOM05D006883 ORTHO05D008624 1.5e-34 149.4 121 63.6
DCAR_030558 Daucus carota HOM05D006883 ORTHO05D008624 1.5e-34 149.4 121 62.0
DCAR_030562 Daucus carota HOM05D006883 ORTHO05D008624 1.5e-34 149.4 121 62.0
Gohir.D10G166900 Gossypium hirsutum HOM05D006883 ORTHO05D008624 1.5e-34 149.4 121 63.6
Phvul.006G161600 Phaseolus vulgaris HOM05D006883 ORTHO05D008624 1.5e-34 149.4 121 62.8
VMungo0540G0878 Vigna mungo HOM05D006883 ORTHO05D008624 1.5e-34 149.4 121 62.8
Actinidia23426 Actinidia chinensis HOM05D006883 ORTHO05D008624 1.9e-34 149.1 121 63.6
CSS0008645 Camellia sinensis var. sinensis HOM05D006883 ORTHO05D008624 2.5e-34 148.7 121 62.0
Prupe.1G141800 Prunus persica HOM05D006883 ORTHO05D008624 2.5e-34 148.7 121 62.8
Lj6P670T41 Lonicera japonica HOM05D006883 ORTHO05D008624 3.3e-34 148.3 121 62.0
vmacro08200 Vaccinium macrocarpon HOM05D006883 ORTHO05D008624 3.3e-34 148.3 121 63.6
CANSAT78G0922 Cannabis sativa HOM05D006883 ORTHO05D008624 4.3e-34 147.9 120 64.2
AUR62041764 Chenopodium quinoa HOM05D006883 ORTHO05D008624 4.3e-34 147.9 121 63.6
Glyma.13G215400 Glycine max HOM05D006883 ORTHO05D008624 4.3e-34 147.9 121 62.0
PGR004G1631 Punica granatum HOM05D006883 ORTHO05D008624 4.3e-34 147.9 121 62.8
SalBow2G1088 Salvia bowleyana HOM05D006883 ORTHO05D008624 4.3e-34 147.9 120 62.5
TWI53G0676 Tripterygium wilfordii HOM05D006883 ORTHO05D008624 4.3e-34 147.9 121 62.8
TWI53G1857 Tripterygium wilfordii HOM05D006883 ORTHO05D008624 4.3e-34 147.9 121 62.8
MSTRG.10057 Avicennia marina HOM05D006883 ORTHO05D008624 5.6e-34 147.5 121 64.5
Lalb_Chr15g0087031 Lupinus albus HOM05D006883 ORTHO05D008624 5.6e-34 147.5 121 62.8
Aa31LG11G10960 Aethionema arabicum HOM05D006883 ORTHO05D008624 7.4e-34 147.1 121 62.8
CsaV3_3G014130 Cucumis sativus L. HOM05D006883 ORTHO05D008624 7.4e-34 147.1 121 61.2
Lalb_Chr18g0055701 Lupinus albus HOM05D006883 ORTHO05D008624 7.4e-34 147.1 121 62.8
Rhsim04G0216600 Rhododendron simsii HOM05D006883 ORTHO05D008624 7.4e-34 147.1 121 62.8
PSO210G3900 Papaver somniferum HOM05D006883 ORTHO05D008624 9.6e-34 146.7 121 62.0
arahy.Tifrunner.gnm1.ann1.GN2N7N Arachis hypogaea HOM05D006883 ORTHO05D008624 1.3e-33 146.4 121 61.2
arahy.Tifrunner.gnm1.ann1.WI0ZBZ Arachis hypogaea HOM05D006883 ORTHO05D008624 1.3e-33 146.4 121 61.2
CAN.G556.8 Capsicum annuum HOM05D006883 ORTHO05D008624 1.3e-33 146.4 120 64.2
MELO3C006606.2 Cucumis melo HOM05D006883 ORTHO05D008624 1.3e-33 146.4 121 61.2
Psat1g187280 Pisum sativum HOM05D006883 ORTHO05D008624 1.3e-33 146.4 121 61.2
Ca_00572_v3 Cicer arietinum L. HOM05D006883 ORTHO05D008624 1.6e-33 146.0 121 61.2
Ah.06g192160 Amaranthus hybridus HOM05D006883 ORTHO05D008624 2.1e-33 145.6 121 62.8
PSO170G0113 Papaver somniferum HOM05D006883 ORTHO05D008624 2.8e-33 145.2 121 61.2
Medtr2g020160 Medicago truncatula HOM05D006883 ORTHO05D008624 3.7e-33 144.8 121 62.0
Sc25g0004770 Simmondsia chinensis HOM05D006883 ORTHO05D008624 3.7e-33 144.8 121 60.3
Eucgr.H03771 Eucalyptus grandis HOM05D006883 ORTHO05D008624 4.8e-33 144.4 121 60.3
Lsat_1_v5_gn_3_24840 Lactuca sativa HOM05D006883 ORTHO05D008624 4.8e-33 144.4 120 64.2
Duzib052G0675 Durio zibethinus HOM05D006883 ORTHO05D008624 8.1e-33 143.7 121 61.2
THA.LOC104802726 Tarenaya hassleriana HOM05D006883 ORTHO05D008624 8.1e-33 143.7 121 59.5
Atru.BG.87.p Acer truncatum HOM05D006883 ORTHO05D008624 1.1e-32 143.3 121 62.8
EL10Ac4g09099 Beta vulgaris HOM05D006883 ORTHO05D008624 1.1e-32 143.3 121 62.8
Thhalv10013668m.g Eutrema salsugineum HOM05D006883 ORTHO05D008624 1.1e-32 143.3 121 60.3
LjContig00389g0025618 Lotus japonicus HOM05D006883 ORTHO05D008624 1.1e-32 143.3 121 60.3
CDE11G0693 Ceratophyllum demersum HOM05D006883 ORTHO05D008624 1.4e-32 142.9 121 61.2
HanXRQChr08g0208101 Helianthus annuus HOM05D006883 ORTHO05D008624 1.4e-32 142.9 120 63.3
Mapoly0058s0049 Marchantia polymorpha HOM05D006883 ORTHO05D008624 1.4e-32 142.9 120 61.7
CARHR194360 Cardamine hirsuta HOM05D006883 ORTHO05D008624 1.8e-32 142.5 121 59.5
MBI19_g30852_MAGBIO Magnolia biondii HOM05D006883 ORTHO05D008624 1.8e-32 142.5 121 62.0
TPR.G1530 Trifolium pratense HOM05D006883 ORTHO05D008624 1.8e-32 142.5 120 61.7
ECA246G3623 Erigeron canadensis HOM05D006883 ORTHO05D008624 2.4e-32 142.1 120 62.5
unitig_748.g8372 Utricularia gibba HOM05D006883 ORTHO05D008624 2.4e-32 142.1 121 59.5
AUR62041032 Chenopodium quinoa HOM05D006883 ORTHO05D008624 3.1e-32 141.7 121 60.3
CDE02G1591 Ceratophyllum demersum HOM05D006883 ORTHO05D008624 4.0e-32 141.4 121 60.3
ATR0706G234 Amborella trichopoda HOM05D006883 ORTHO05D008624 6.9e-32 140.6 120 60.0
Migut.G00206 Erythranthe guttata HOM05D006883 ORTHO05D008624 9.0e-32 140.2 121 59.5
Carub.0006s1695 Capsella rubella HOM05D006883 ORTHO05D008624 1.2e-31 139.8 121 58.7
DCAR_030560 Daucus carota HOM05D006883 ORTHO05D008624 2.0e-31 139.0 107 62.6
Sp6g25680 Schrenkiella parvula HOM05D006883 ORTHO05D008624 2.6e-31 138.7 121 58.7
BcaC04g18657 Brassica carinata HOM05D006883 ORTHO05D008624 5.8e-31 137.5 121 57.9
C09p57810 Brassica napus HOM05D006883 ORTHO05D008624 5.8e-31 137.5 121 57.9
BolC9t58650H Brassica oleracea HOM05D006883 ORTHO05D008624 5.8e-31 137.5 121 57.9
SGA_v2.0_scaffold973G53763 Striga asiatica HOM05D006883 ORTHO05D008624 5.8e-31 137.5 120 58.3
AL6G29930 Arabidopsis lyrata HOM05D006883 ORTHO05D008624 1.0e-30 136.7 121 57.9
AT5G18660 Arabidopsis thaliana HOM05D006883 ORTHO05D008624 1.0e-30 136.7 121 57.9
SEGI_20295 Sequoiadendron giganteum HOM05D006883 ORTHO05D008624 1.3e-30 136.3 119 60.5
A10p20920 Brassica napus HOM05D006883 ORTHO05D008624 2.2e-30 135.6 121 57.0
BraA10t44156Z Brassica rapa HOM05D006883 ORTHO05D008624 2.2e-30 135.6 121 57.0
BcaB08g36654 Brassica carinata HOM05D006883 ORTHO05D008624 3.8e-30 134.8 121 56.2
Pp3c7_3620 Physcomitrium patens HOM05D006883 ORTHO05D008624 4.9e-30 134.4 120 59.2
Zm00001eb016830 Zea mays HOM05D006883 ORTHO05D008624 4.9e-30 134.4 121 56.2
AagrBONN_evm.TU.Sc2ySwM_369.460 Anthoceros agrestis HOM05D006883 ORTHO05D008624 6.5e-30 134.0 120 57.5
Os03g0351200 Oryza sativa ssp. japonica HOM05D006883 ORTHO05D008624 1.1e-29 133.3 120 57.5
CSS0011936 Camellia sinensis var. sinensis HOM05D006883 ORTHO05D008624 4.2e-29 131.3 121 55.4
CBR_g77624 Chara braunii HOM05D006883 ORTHO05D008624 9.3e-29 130.2 120 53.3
CSS0009780 Camellia sinensis var. sinensis HOM05D006883 ORTHO05D008624 2.7e-28 128.6 121 53.7
HPP92_006930 Vanilla planifolia HOM05D006883 ORTHO05D008624 5.1e-27 124.4 121 48.8
SMO174G0102 Selaginella moellendorffii HOM05D006883 ORTHO05D008624 6.9e-24 114.0 123 48.0
Cre01.g042800 Chlamydomonas reinhardtii HOM05D006883 ORTHO05D008624 1.0e-22 110.2 117 47.9
MCO03G528 Micromonas commoda HOM05D006883 ORTHO05D008624 3.8e-22 108.2 121 47.1
Cpa.g.sc1008.1 Carica papaya HOM05D006883 ORTHO05D008624 8.2e-17 90.5 50 82.0
PRCOL_00006445 Prasinoderma coloniale HOM05D006883 ORTHO05D008624 4.5e-07 58.2 120 30.8


User provided reference genes

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