Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu061920.1 Olea europaea HOM05D007325 ORTHO05D009251 1.9e-54 215.7 115 100.0
Cc02_g36910 Coffea canephora HOM05D007325 ORTHO05D009251 5.0e-23 111.3 105 60.0
Dinv24533 Davidia involucrata HOM05D003267 ORTHO05D003955 5.0e-23 111.3 102 57.8
PGSC0003DMG400018232 Solanum tuberosum HOM05D007325 ORTHO05D009251 3.0e-20 102.1 107 55.1
Lj5P313T22 Lonicera japonica HOM05D007325 ORTHO05D009251 9.7e-19 97.1 88 54.5
Migut.B00680 Erythranthe guttata HOM05D007325 ORTHO05D009251 6.3e-18 94.4 80 65.0
SalBow6G6911 Salvia bowleyana HOM05D007325 ORTHO05D009251 2.0e-16 89.4 105 54.3
Dinv30961 Davidia involucrata HOM05D007325 ORTHO05D009251 3.4e-16 88.6 113 50.4
Sopen01g044880 Solanum pennellii HOM05D007325 ORTHO05D009251 7.7e-16 87.4 107 51.4
SGA_v2.0_scaffold131G34452 Striga asiatica HOM05D007325 ORTHO05D009251 7.7e-16 87.4 101 53.5
CSS0011097 Camellia sinensis var. sinensis HOM05D007325 ORTHO05D009251 1.3e-15 86.7 115 47.8
MD12G1197000 Malus domestica HOM05D007325 ORTHO05D009251 1.3e-15 86.7 109 48.6
Manes.08G105900 Manihot esculenta HOM05D007325 ORTHO05D009251 6.5e-15 84.3 113 46.9
MD04G1183600 Malus domestica HOM05D007325 ORTHO05D009251 8.5e-15 84.0 109 51.4
Lsat_1_v5_gn_9_83741 Lactuca sativa HOM05D007325 ORTHO05D009251 1.4e-14 83.2 63 57.1
Prupe.6G302100 Prunus persica HOM05D007325 ORTHO05D009251 5.5e-14 81.3 110 49.1
CANSAT54G2629 Cannabis sativa HOM05D007325 ORTHO05D009251 1.6e-13 79.7 95 47.4
HanXRQChr04g0108581 Helianthus annuus HOM05D007325 ORTHO05D009251 1.8e-12 76.3 97 48.5
Lj9P239T47 Lonicera japonica HOM05D007325 ORTHO05D009251 2.3e-12 75.9 64 60.9
Thecc.05G331600 Theobroma cacao HOM05D007325 ORTHO05D009251 3.0e-12 75.5 93 50.5
VMungo1383G0662 Vigna mungo HOM05D007325 ORTHO05D009251 3.0e-12 75.5 116 44.0
arahy.Tifrunner.gnm1.ann1.Y42B53 Arachis hypogaea HOM05D007325 ORTHO05D009251 6.7e-12 74.3 77 51.9
Phvul.001G220700 Phaseolus vulgaris HOM05D007325 ORTHO05D009251 6.7e-12 74.3 108 44.4
Lj1g0016832 Lotus japonicus HOM05D007325 ORTHO05D009251 1.1e-11 73.6 93 47.3
Manes.09G182800 Manihot esculenta HOM05D007325 ORTHO05D009251 1.1e-11 73.6 102 46.1
Potri.005G000700 Populus trichocarpa HOM05D007325 ORTHO05D009251 1.1e-11 73.6 76 52.6
Ciclev10030031m.g Citrus clementina HOM05D007325 ORTHO05D009251 2.5e-11 72.4 53 64.2
PGR119G2017 Punica granatum HOM05D007325 ORTHO05D009251 2.5e-11 72.4 77 54.5
Thhalv10022316m.g Eutrema salsugineum HOM05D007325 ORTHO05D009251 3.3e-11 72.0 94 47.9
Sp3g04850 Schrenkiella parvula HOM05D007325 ORTHO05D009251 3.3e-11 72.0 94 47.9
FAN09G1210 Fragaria x ananassa HOM05D007325 ORTHO05D009251 7.4e-11 70.9 94 48.9
Glyma.03G226900 Glycine max HOM05D007325 ORTHO05D009251 9.7e-11 70.5 108 42.6
Carub.0006s2420 Capsella rubella HOM05D007325 ORTHO05D009251 1.7e-10 69.7 91 45.1
Oeu006910.1 Olea europaea HOM05D007325 ORTHO05D009251 1.7e-10 69.7 91 47.3
RcHm_v2.0_Chr3g0459051 Rosa chinensis HOM05D007325 ORTHO05D009251 1.7e-10 69.7 94 47.9
BcaC01g04310 Brassica carinata HOM05D007325 ORTHO05D009251 3.7e-10 68.6 100 43.0
C03p41860 Brassica napus HOM05D007325 ORTHO05D009251 3.7e-10 68.6 100 43.0
BolC3t16469H Brassica oleracea HOM05D007325 ORTHO05D009251 3.7e-10 68.6 100 43.0
Gohir.D13G117300 Gossypium hirsutum HOM05D007325 ORTHO05D009251 8.2e-10 67.4 78 48.7
ATR0693G152 Amborella trichopoda HOM05D007325 ORTHO05D009251 1.1e-09 67.0 63 52.4
Gohir.A13G114400 Gossypium hirsutum HOM05D007325 ORTHO05D009251 1.1e-09 67.0 78 48.7
Lalb_Chr04g0260261 Lupinus albus HOM05D007325 ORTHO05D009251 1.1e-09 67.0 99 38.4
THA.LOC104822290 Tarenaya hassleriana HOM05D007325 ORTHO05D009251 1.1e-09 67.0 91 41.8
BcaB04g19727 Brassica carinata HOM05D003663 ORTHO05D005327 2.4e-09 65.9 54 63.0
Lalb_Chr06g0167201 Lupinus albus HOM05D007325 ORTHO05D009251 3.1e-09 65.5 48 68.8
BcaNung03959 Brassica carinata HOM05D003663 ORTHO05D005327 6.9e-09 64.3 48 68.8
Glyma.19G223800 Glycine max HOM05D007325 ORTHO05D009251 6.9e-09 64.3 96 40.6
Atru.chr12.1499 Acer truncatum HOM05D007325 ORTHO05D009251 9.1e-09 63.9 76 51.3
Gorai.013G131900 Gossypium raimondii HOM05D007325 ORTHO05D009251 9.1e-09 63.9 78 47.4
TPR.G3077 Trifolium pratense HOM05D007325 ORTHO05D009251 9.1e-09 63.9 64 54.7
AL3G16720 Arabidopsis lyrata HOM05D007325 ORTHO05D009251 1.2e-08 63.5 100 45.0
A05p42120 Brassica napus HOM05D007325 ORTHO05D009251 1.2e-08 63.5 100 43.0
Psat6g156800 Pisum sativum HOM05D007325 ORTHO05D009251 1.2e-08 63.5 64 53.1
QL03p011419 Quercus lobata HOM05D007325 ORTHO05D009251 1.2e-08 63.5 56 62.5
Eucgr.H01350 Eucalyptus grandis HOM05D007325 ORTHO05D009251 1.5e-08 63.2 96 44.8
BcaC05g30077 Brassica carinata HOM05D007325 ORTHO05D009251 2.0e-08 62.8 100 43.0
C05p61330 Brassica napus HOM05D007325 ORTHO05D009251 2.0e-08 62.8 100 43.0
BolC5t34792H Brassica oleracea HOM05D007325 ORTHO05D009251 2.0e-08 62.8 100 43.0
FAN02G3982 Fragaria x ananassa HOM05D007325 ORTHO05D009251 2.0e-08 62.8 94 45.7
FAN05G0265 Fragaria x ananassa HOM05D007325 ORTHO05D009251 2.0e-08 62.8 94 45.7
FAN05G4266 Fragaria x ananassa HOM05D007325 ORTHO05D009251 2.0e-08 62.8 94 45.7
Potri.005G000401 Populus trichocarpa HOM05D007325 ORTHO05D009251 2.0e-08 62.8 65 50.8
Carub.0003s0533 Capsella rubella HOM05D007325 ORTHO05D009251 2.6e-08 62.4 94 45.7
CARHR080420 Cardamine hirsuta HOM05D007325 ORTHO05D009251 2.6e-08 62.4 94 44.7
Glyma.20G089800 Glycine max HOM05D007325 ORTHO05D009251 2.6e-08 62.4 48 66.7
Glyma.10G141100 Glycine max HOM05D007325 ORTHO05D009251 3.4e-08 62.0 50 64.0
MBI18_g28938_MAGBIO Magnolia biondii HOM05D007325 ORTHO05D009251 3.4e-08 62.0 44 70.5
Lalb_Chr02g0147341 Lupinus albus HOM05D007325 ORTHO05D009251 4.5e-08 61.6 106 39.6
BraA05t22930Z Brassica rapa HOM05D007325 ORTHO05D009251 5.9e-08 61.2 80 48.8
TAR365G1009 Trochodendron aralioides HOM05D007325 ORTHO05D009251 5.9e-08 61.2 91 45.1
Lj5g0004840 Lotus japonicus HOM05D007325 ORTHO05D009251 7.7e-08 60.8 113 40.7
Phvul.007G207000 Phaseolus vulgaris HOM05D007325 ORTHO05D009251 7.7e-08 60.8 50 64.0
VMungo0720G0176 Vigna mungo HOM05D003267 ORTHO05D003955 7.7e-08 60.8 50 64.0
FAN14G5110 Fragaria x ananassa HOM05D007325 ORTHO05D009251 1.0e-07 60.5 54 61.1
Lalb_Chr21g0309941 Lupinus albus HOM05D007325 ORTHO05D009251 1.0e-07 60.5 101 41.6
Medtr1g085240 Medicago truncatula HOM05D007325 ORTHO05D009251 1.0e-07 60.5 62 54.8
Aa31LG5G16370 Aethionema arabicum HOM05D007325 ORTHO05D009251 1.3e-07 60.1 45 71.1
Cfa004401 Carpinus fangiana HOM05D008494 ORTHO05D010021 1.3e-07 60.1 89 44.9
TAR365G0322 Trochodendron aralioides HOM05D007325 ORTHO05D009251 2.2e-07 59.3 42 69.0
MBI18_g03881_MAGBIO Magnolia biondii HOM05D007325 ORTHO05D009251 2.9e-07 58.9 46 63.0
Thhalv10005170m.g Eutrema salsugineum HOM05D007325 ORTHO05D009251 3.8e-07 58.5 91 41.8
Aa31LG11G10030 Aethionema arabicum HOM05D007325 ORTHO05D009251 5.0e-07 58.2 91 41.8
arahy.Tifrunner.gnm1.ann1.GPC6YY Arachis hypogaea HOM05D007325 ORTHO05D009251 6.5e-07 57.8 72 47.2
BcaB04g19232 Brassica carinata HOM05D007325 ORTHO05D009251 8.5e-07 57.4 80 47.5
A03p34390 Brassica napus HOM05D007325 ORTHO05D009251 1.1e-06 57.0 45 64.4
TWI14G0425 Tripterygium wilfordii HOM05D007325 ORTHO05D009251 1.1e-06 57.0 94 42.6
Eucgr.B01357 Eucalyptus grandis HOM05D007325 ORTHO05D009251 1.4e-06 56.6 44 65.9
BraA03t12615Z Brassica rapa HOM05D007325 ORTHO05D009251 1.9e-06 56.2 62 50.0
FvH4_6g08790 Fragaria vesca HOM05D007325 ORTHO05D009251 1.9e-06 56.2 92 43.5
Medtr7g111170 Medicago truncatula HOM05D007325 ORTHO05D009251 1.9e-06 56.2 69 47.8
AL6G38400 Arabidopsis lyrata HOM05D007325 ORTHO05D009251 2.5e-06 55.8 39 71.8
CARHR186980 Cardamine hirsuta HOM05D007325 ORTHO05D009251 4.2e-06 55.1 38 71.1
Sed0022272 Sechium edule HOM05D007325 ORTHO05D009251 5.5e-06 54.7 60 53.3
PGR031G0924 Punica granatum HOM05D007325 ORTHO05D009251 7.2e-06 54.3 80 47.5


User provided reference genes

Program Settings