Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu061898.1 Olea europaea HOM05D005114 ORTHO05D006301 1.6e-82 309.3 149 100.0
Oeu025012.1 Olea europaea HOM05D005114 ORTHO05D006301 9.5e-67 256.9 144 88.9
Duzib248G1587 Durio zibethinus HOM05D005114 ORTHO05D006301 9.2e-54 213.8 143 71.3
TAR628G1615 Trochodendron aralioides HOM05D005114 ORTHO05D006301 2.0e-53 212.6 138 70.3
COL.COLO4_34318 Corchorus olitorius HOM05D005114 ORTHO05D006301 3.5e-53 211.8 142 69.7
CiPaw.05G093800 Carya illinoinensis HOM05D005114 ORTHO05D006301 8.6e-52 207.2 139 69.8
Thecc.02G147000 Theobroma cacao HOM05D005114 ORTHO05D006301 1.9e-51 206.1 143 68.5
TAR376G1108 Trochodendron aralioides HOM05D005114 ORTHO05D006301 2.5e-51 205.7 138 69.6
Gohir.A03G170500 Gossypium hirsutum HOM05D005114 ORTHO05D006301 1.6e-50 203.0 151 63.6
Gorai.005G216400 Gossypium raimondii HOM05D005114 ORTHO05D006301 2.8e-50 202.2 151 63.6
Haze_01976 Corylus avellana HOM05D005114 ORTHO05D006301 3.6e-50 201.8 135 71.1
Cfa005386 Carpinus fangiana HOM05D005114 ORTHO05D006301 1.8e-49 199.5 135 71.1
Gohir.D02G193600 Gossypium hirsutum HOM05D005114 ORTHO05D006301 4.0e-49 198.4 151 62.9
QL11p056532 Quercus lobata HOM05D005114 ORTHO05D006301 5.2e-49 198.0 140 70.0
GSVIVG01023865001 Vitis vinifera HOM05D007297 ORTHO05D009352 4.4e-48 194.9 134 67.9
Duzib052G0751 Durio zibethinus HOM05D005114 ORTHO05D006301 7.5e-48 194.1 143 65.0
Nitab4.5_0000783g0020 Nicotiana tabacum HOM05D005114 ORTHO05D006301 9.8e-48 193.7 175 60.0
TAR381G0701 Trochodendron aralioides HOM05D005114 ORTHO05D006301 9.8e-48 193.7 138 65.9
Cpa.g.sc232.10 Carica papaya HOM05D005114 ORTHO05D006301 8.3e-47 190.7 132 70.5
SalBow5G2991 Salvia bowleyana HOM05D005114 ORTHO05D006301 8.3e-47 190.7 160 61.9
SalBow5G4655 Salvia bowleyana HOM05D005114 ORTHO05D006301 8.3e-47 190.7 160 61.9
Gohir.D12G013600 Gossypium hirsutum HOM05D005114 ORTHO05D006301 1.9e-46 189.5 147 63.9
Sabra04G0139700 Salix brachista HOM05D005114 ORTHO05D006301 1.9e-46 189.5 138 65.9
Ciclev10029408m.g Citrus clementina HOM05D005114 ORTHO05D006301 2.4e-46 189.1 147 64.6
ClCG02G003320 Citrullus lanatus HOM05D005114 ORTHO05D006301 3.2e-46 188.7 137 65.7
MSTRG.27609 Avicennia marina HOM05D005114 ORTHO05D006301 4.1e-46 188.3 159 62.3
Manes.15G113200 Manihot esculenta HOM05D005114 ORTHO05D006301 5.4e-46 188.0 138 65.9
Atru.chr5.3568 Acer truncatum HOM05D005114 ORTHO05D006301 2.0e-45 186.0 142 64.1
Gorai.008G013600 Gossypium raimondii HOM05D005114 ORTHO05D006301 2.0e-45 186.0 147 63.3
Migut.N01364 Erythranthe guttata HOM05D005114 ORTHO05D006301 7.8e-45 184.1 155 66.5
CANSAT25G0809 Cannabis sativa HOM05D005114 ORTHO05D006301 8.6e-44 180.6 146 65.8
Potri.004G207500 Populus trichocarpa HOM05D005114 ORTHO05D006301 1.5e-43 179.9 142 64.8
Aqoxy6G01552 Aquilegia oxysepala HOM05D005114 ORTHO05D006301 3.3e-43 178.7 134 62.7
Eucgr.I01537 Eucalyptus grandis HOM05D005114 ORTHO05D006301 2.8e-42 175.6 125 67.2
Sabra09G0131100 Salix brachista HOM05D005114 ORTHO05D006301 3.1e-41 172.2 139 64.0
Lsat_1_v5_gn_4_127800 Lactuca sativa HOM05D005114 ORTHO05D006301 4.0e-41 171.8 157 57.3
Sed0004058 Sechium edule HOM05D005114 ORTHO05D006301 5.2e-41 171.4 138 61.6
Potri.009G168800 Populus trichocarpa HOM05D005114 ORTHO05D006301 2.0e-40 169.5 141 62.4
RcHm_v2.0_Chr6g0281051 Rosa chinensis HOM05D005114 ORTHO05D006301 2.6e-40 169.1 137 64.2
MELO3C015705.2 Cucumis melo HOM05D005114 ORTHO05D006301 1.3e-39 166.8 144 60.4
Solyc01g112260.4 Solanum lycopersicum HOM05D005114 ORTHO05D006301 2.2e-39 166.0 166 55.4
Sopen01g054350 Solanum pennellii HOM05D005114 ORTHO05D006301 3.7e-39 165.2 166 54.8
Rhsim05G0044800 Rhododendron simsii HOM05D005114 ORTHO05D006301 4.9e-39 164.9 125 64.8
Lsat_1_v5_gn_8_120760 Lactuca sativa HOM05D005114 ORTHO05D006301 6.4e-39 164.5 155 56.1
Prupe.8G180900 Prunus persica HOM05D007297 ORTHO05D009352 8.3e-39 164.1 125 66.4
Lsat_1_v5_gn_3_48420 Lactuca sativa HOM05D005114 ORTHO05D006301 1.9e-38 162.9 143 57.3
Duzib132G0223 Durio zibethinus HOM05D005114 ORTHO05D006301 4.1e-38 161.8 113 70.8
Dinv41866 Davidia involucrata HOM05D005114 ORTHO05D006301 7.1e-38 161.0 126 68.3
PGR142G2291 Punica granatum HOM05D005114 ORTHO05D006301 7.1e-38 161.0 121 60.3
MD11G1242200 Malus domestica HOM05D005114 ORTHO05D006301 1.2e-37 160.2 139 60.4
FAN27G0013 Fragaria x ananassa HOM05D005114 ORTHO05D006301 1.6e-37 159.8 139 61.9
FvH4_2g16910 Fragaria vesca HOM05D005114 ORTHO05D006301 3.5e-37 158.7 139 61.9
SGA_v2.0_scaffold98G29308 Striga asiatica HOM05D005114 ORTHO05D006301 4.6e-37 158.3 160 56.2
MD05G1140900 Malus domestica HOM05D005114 ORTHO05D006301 6.0e-37 157.9 124 64.5
FAN24G2001 Fragaria x ananassa HOM05D008916 ORTHO05D029537 7.8e-37 157.5 135 63.0
HanXRQChr15g0479801 Helianthus annuus HOM05D005114 ORTHO05D006301 1.3e-36 156.8 130 60.0
Ah.01g017650 Amaranthus hybridus HOM05D005114 ORTHO05D006301 1.7e-36 156.4 142 53.5
ClCG02G010460 Citrullus lanatus HOM05D005114 ORTHO05D006301 1.7e-36 156.4 132 59.1
Sed0025941 Sechium edule HOM05D005114 ORTHO05D006301 2.3e-36 156.0 133 59.4
Ah.01g009940 Amaranthus hybridus HOM05D005114 ORTHO05D006301 3.0e-36 155.6 138 53.6
MELO3C013487.2 Cucumis melo HOM05D005114 ORTHO05D006301 5.1e-36 154.8 132 59.1
CsaV3_6G010060 Cucumis sativus L. HOM05D005114 ORTHO05D006301 1.5e-35 153.3 132 59.1
Lj5P171T50 Lonicera japonica HOM05D005114 ORTHO05D006301 1.5e-35 153.3 91 69.2
Phvul.008G292700 Phaseolus vulgaris HOM05D005114 ORTHO05D006301 4.3e-35 151.8 137 57.7
Eucgr.H04995 Eucalyptus grandis HOM05D005114 ORTHO05D006301 1.6e-34 149.8 136 58.1
FAN15G0896 Fragaria x ananassa HOM05D005114 ORTHO05D006301 1.6e-34 149.8 139 59.7
PSO761G0527 Papaver somniferum HOM05D005114 ORTHO05D006301 1.6e-34 149.8 138 53.6
Nn6g31654 Nelumbo nucifera HOM05D005114 ORTHO05D006301 2.1e-34 149.4 124 62.1
EL10Ac9g21545 Beta vulgaris HOM05D005114 ORTHO05D006301 2.8e-34 149.1 137 54.0
PSO210G3276 Papaver somniferum HOM05D005114 ORTHO05D006301 2.8e-34 149.1 138 52.9
HanXRQChr16g0528291 Helianthus annuus HOM05D005114 ORTHO05D006301 4.7e-34 148.3 130 57.7
unitig_0.g2368 Utricularia gibba HOM05D005114 ORTHO05D006301 1.4e-33 146.7 136 58.8
CDE06G2378 Ceratophyllum demersum HOM05D005114 ORTHO05D006301 4.0e-33 145.2 140 49.3
PGR042G3856 Punica granatum HOM05D005114 ORTHO05D006301 8.9e-33 144.1 140 55.0
TWI31G1388 Tripterygium wilfordii HOM05D005114 ORTHO05D006301 1.2e-32 143.7 129 61.2
VMungo0647G0598 Vigna mungo HOM05D005114 ORTHO05D006301 5.8e-32 141.4 130 55.4
DCAR_006992 Daucus carota HOM05D005114 ORTHO05D006301 3.8e-31 138.7 139 56.1
CSS0034975 Camellia sinensis var. sinensis HOM05D005114 ORTHO05D006301 8.4e-31 137.5 135 54.1
CDE07G1352 Ceratophyllum demersum HOM05D005114 ORTHO05D006301 4.1e-30 135.2 141 47.5
Glyma.02G311900 Glycine max HOM05D005114 ORTHO05D006301 1.2e-29 133.7 126 54.8
MBI04_g33967_MAGBIO Magnolia biondii HOM05D005114 ORTHO05D006301 2.7e-29 132.5 125 56.0
CsaV3_7G002020 Cucumis sativus L. HOM05D005114 ORTHO05D006301 3.5e-29 132.1 130 55.4
CiPaw.06G114800 Carya illinoinensis HOM05D005114 ORTHO05D006301 4.6e-29 131.7 95 64.2
THA.LOC104819696 Tarenaya hassleriana HOM05D005114 ORTHO05D006301 1.0e-28 130.6 128 56.2
Sc08g0002110 Simmondsia chinensis HOM05D005114 ORTHO05D006301 5.1e-28 128.3 132 47.7
unitig_26.g9983 Utricularia gibba HOM05D005114 ORTHO05D006301 8.7e-28 127.5 134 53.0
PSO675G3082 Papaver somniferum HOM05D005114 ORTHO05D006301 1.9e-27 126.3 141 49.6
Sp7g33120 Schrenkiella parvula HOM05D005114 ORTHO05D006301 1.9e-27 126.3 141 48.2
Cc09_g10870 Coffea canephora HOM05D007297 ORTHO05D009352 2.5e-27 125.9 90 64.4
PSO541G2758 Papaver somniferum HOM05D005114 ORTHO05D006301 2.5e-27 125.9 142 49.3
Carub.0007s0497 Capsella rubella HOM05D005114 ORTHO05D006301 4.3e-27 125.2 142 47.9
ATR0605G119 Amborella trichopoda HOM05D005114 ORTHO05D006301 5.6e-27 124.8 146 48.6
Thhalv10026488m.g Eutrema salsugineum HOM05D005114 ORTHO05D006301 5.6e-27 124.8 147 45.6
LjContig00081g0003123 Lotus japonicus HOM05D005114 ORTHO05D006301 1.2e-26 123.6 118 54.2
AL7G15830 Arabidopsis lyrata HOM05D005114 ORTHO05D006301 2.8e-26 122.5 143 46.2
CARHR243650 Cardamine hirsuta HOM05D005114 ORTHO05D006301 2.8e-26 122.5 132 49.2
BraA01t00308Z Brassica rapa HOM05D005114 ORTHO05D006301 3.6e-26 122.1 136 47.8
AT4G35320 Arabidopsis thaliana HOM05D005114 ORTHO05D006301 4.7e-26 121.7 143 46.2
AUR62013183 Chenopodium quinoa HOM05D005114 ORTHO05D006301 4.7e-26 121.7 83 61.4
HanXRQChr14g0449881 Helianthus annuus HOM05D005114 ORTHO05D006301 4.7e-26 121.7 147 49.7
Aa31LG2G14950 Aethionema arabicum HOM05D005114 ORTHO05D006301 1.1e-25 120.6 136 45.6
BolC1t00348H Brassica oleracea HOM05D005114 ORTHO05D006301 1.1e-25 120.6 136 47.1
A01p03230 Brassica napus HOM05D005114 ORTHO05D006301 1.4e-25 120.2 136 47.1
TWI75G1159 Tripterygium wilfordii HOM05D005114 ORTHO05D006301 1.4e-25 120.2 136 52.9
unitig_749.g13979 Utricularia gibba HOM05D005114 ORTHO05D006301 1.4e-25 120.2 134 50.7
BcaNung00605 Brassica carinata HOM05D005114 ORTHO05D006301 1.8e-25 119.8 138 47.8
C01p03580 Brassica napus HOM05D005114 ORTHO05D006301 1.8e-25 119.8 138 47.8
Os08g0511400 Oryza sativa ssp. japonica HOM05D005114 ORTHO05D006301 1.8e-25 119.8 126 45.2
CAN.G1645.5 Capsicum annuum HOM05D005114 ORTHO05D006301 6.9e-25 117.9 109 54.1
THA.LOC104807409 Tarenaya hassleriana HOM05D005114 ORTHO05D006301 9.9e-24 114.0 119 52.9
Os02g0715300 Oryza sativa ssp. japonica HOM05D005114 ORTHO05D006301 1.3e-23 113.6 135 43.0
CSS0049408 Camellia sinensis var. sinensis HOM05D005114 ORTHO05D006301 2.2e-23 112.8 144 47.2
Glyma.14G000700 Glycine max HOM05D005114 ORTHO05D006301 1.2e-21 107.1 122 49.2
HPP92_018957 Vanilla planifolia HOM05D005114 ORTHO05D006301 2.7e-21 105.9 142 43.0
Zm00001eb252690 Zea mays HOM05D005114 ORTHO05D006301 1.7e-20 103.2 124 44.4
Medtr5g099250 Medicago truncatula HOM05D005114 ORTHO05D006301 4.3e-19 98.6 119 47.9
SEGI_06952 Sequoiadendron giganteum HOM05D005114 ORTHO05D006301 1.1e-17 94.0 140 37.9
HPP92_019672 Vanilla planifolia HOM05D005114 ORTHO05D006301 1.4e-17 93.6 144 37.5
TPR.G18628 Trifolium pratense HOM05D005114 ORTHO05D006301 2.4e-17 92.8 91 52.7
Gohir.A12G012850 Gossypium hirsutum HOM05D005114 ORTHO05D006301 1.5e-16 90.1 63 68.3
Carub.0003s3126 Capsella rubella HOM05D005114 ORTHO05D006301 2.0e-16 89.7 131 39.7
HPP92_017809 Vanilla planifolia HOM05D005114 ORTHO05D006301 3.8e-15 85.5 127 42.5
Ca_06504_v3 Cicer arietinum L. HOM05D005114 ORTHO05D006301 8.4e-15 84.3 131 44.3
Thhalv10023149m.g Eutrema salsugineum HOM05D005114 ORTHO05D006301 1.4e-14 83.6 130 40.8
Lju1609C0T0 Lonicera japonica HOM05D005114 ORTHO05D006301 1.4e-14 83.6 53 64.2
Lalb_Chr10g0107691 Lupinus albus HOM05D005114 ORTHO05D006301 1.4e-14 83.6 129 41.1
AT2G17300 Arabidopsis thaliana HOM05D005114 ORTHO05D006301 1.9e-14 83.2 126 40.5
A07p03740 Brassica napus HOM05D005114 ORTHO05D006301 3.2e-14 82.4 118 42.4
BraA07t28162Z Brassica rapa HOM05D005114 ORTHO05D006301 4.2e-14 82.0 118 42.4
BcaC06g36254 Brassica carinata HOM05D005114 ORTHO05D006301 9.3e-14 80.9 118 41.5
C07p05980 Brassica napus HOM05D005114 ORTHO05D006301 9.3e-14 80.9 118 41.5
BolC7t41007H Brassica oleracea HOM05D005114 ORTHO05D006301 9.3e-14 80.9 118 41.5
BcaB03g16485 Brassica carinata HOM05D005114 ORTHO05D006301 2.1e-13 79.7 112 41.1
Zm00001eb035190 Zea mays HOM05D005114 ORTHO05D006301 1.8e-12 76.6 147 32.7
AL3G50180 Arabidopsis lyrata HOM05D005114 ORTHO05D006301 3.0e-12 75.9 126 39.7
Dinv13785 Davidia involucrata HOM05D005114 ORTHO05D006301 5.6e-11 71.6 43 74.4
Zm00001eb188970 Zea mays HOM05D005114 ORTHO05D006301 9.6e-11 70.9 108 41.7
Dinv11287 Davidia involucrata HOM05D005114 ORTHO05D006301 2.1e-10 69.7 43 74.4
CARHR107410 Cardamine hirsuta HOM05D005114 ORTHO05D006301 1.1e-09 67.4 125 38.4
SEGI_39678 Sequoiadendron giganteum HOM05D005114 ORTHO05D006301 4.2e-06 55.5 80 35.0
SEGI_36834 Sequoiadendron giganteum HOM05D005114 ORTHO05D006301 9.3e-06 54.3 81 37.0


User provided reference genes

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