Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu061855.1 Olea europaea HOM05D000445 ORTHO05D000314 2.6e-62 241.9 121 100.0
Hma1.2p1_0192F.1_g083690 Hydrangea macrophylla HOM05D000445 ORTHO05D000314 6.1e-48 194.1 132 79.5
HanXRQChr00c0394g0574511 Helianthus annuus HOM05D000445 ORTHO05D000314 8.0e-48 193.7 123 82.9
HanXRQChr00c0434g0574681 Helianthus annuus HOM05D000445 ORTHO05D000314 8.0e-48 193.7 123 82.9
HanXRQChr00c0451g0574821 Helianthus annuus HOM05D000445 ORTHO05D000314 8.0e-48 193.7 123 82.9
HanXRQChr00c0524g0575411 Helianthus annuus HOM05D000445 ORTHO05D000314 8.0e-48 193.7 123 82.9
HanXRQChr01g0020161 Helianthus annuus HOM05D000445 ORTHO05D000314 8.0e-48 193.7 123 82.9
HanXRQChr11g0327091 Helianthus annuus HOM05D000445 ORTHO05D000314 8.0e-48 193.7 123 82.9
HanXRQChr12g0369911 Helianthus annuus HOM05D000445 ORTHO05D000314 8.0e-48 193.7 123 82.9
HanXRQChr15g0474951 Helianthus annuus HOM05D000445 ORTHO05D000314 8.0e-48 193.7 123 82.9
HanXRQCPg0580251 Helianthus annuus HOM05D000445 ORTHO05D000314 8.0e-48 193.7 123 82.9
HanXRQCPg0580471 Helianthus annuus HOM05D000445 ORTHO05D000314 8.0e-48 193.7 123 82.9
unitig_91.g26515 Utricularia gibba HOM05D000445 ORTHO05D000314 2.6e-46 188.7 105 90.5
unitig_91.g26530 Utricularia gibba HOM05D000445 ORTHO05D000314 2.6e-46 188.7 105 90.5
Gohir.D01G101865 Gossypium hirsutum HOM05D000445 ORTHO05D000314 7.5e-46 187.2 132 78.0
Gohir.A04G039060 Gossypium hirsutum HOM05D000445 ORTHO05D000314 2.8e-45 185.3 132 77.3
Nitab4.5_0005100g0090 Nicotiana tabacum HOM05D000445 ORTHO05D000314 3.7e-45 184.9 132 78.0
PGR111G0085 Punica granatum HOM05D000445 ORTHO05D000314 6.3e-45 184.1 134 76.1
PGR111G0100 Punica granatum HOM05D000445 ORTHO05D000314 6.3e-45 184.1 134 76.1
Lsat_1_v5_gn_3_13441 Lactuca sativa HOM05D000445 ORTHO05D000314 1.1e-44 183.3 123 80.5
Lsat_1_v5_gn_8_26500 Lactuca sativa HOM05D000445 ORTHO05D000314 1.1e-44 183.3 123 80.5
Sc05g0004090 Simmondsia chinensis HOM05D000445 ORTHO05D000314 1.8e-44 182.6 132 76.5
Nn3g16153 Nelumbo nucifera HOM05D000445 ORTHO05D000314 3.1e-44 181.8 132 77.3
TAR383G0379 Trochodendron aralioides HOM05D000445 ORTHO05D000314 3.1e-44 181.8 132 77.3
Nn269s46007 Nelumbo nucifera HOM05D000445 ORTHO05D000314 4.1e-44 181.4 133 76.7
Nn3g16494 Nelumbo nucifera HOM05D000445 ORTHO05D000314 4.1e-44 181.4 132 77.3
Nitab4.5_0023562g0040 Nicotiana tabacum HOM05D000445 ORTHO05D000314 5.4e-44 181.0 114 85.1
Lsat_1_v5_gn_9_85820 Lactuca sativa HOM05D000445 ORTHO05D000314 7.0e-44 180.6 121 81.0
Lj2C1238G15 Lonicera japonica HOM05D000445 ORTHO05D000314 9.1e-44 180.3 130 78.5
Oeu012799.1 Olea europaea HOM05D000445 ORTHO05D000314 1.2e-43 179.9 100 86.0
PGSC0003DMG400015060 Solanum tuberosum HOM05D000445 ORTHO05D000314 4.5e-43 177.9 104 88.5
DCAR_032529 Daucus carota HOM05D000445 ORTHO05D000314 5.9e-43 177.6 139 71.2
DCAR_032547 Daucus carota HOM05D000445 ORTHO05D000314 5.9e-43 177.6 139 71.2
Aqoxy169s001 Aquilegia oxysepala HOM05D000445 ORTHO05D000314 1.0e-42 176.8 123 79.7
Aqoxy3G01862 Aquilegia oxysepala HOM05D000445 ORTHO05D000314 1.0e-42 176.8 123 79.7
Solyc00g500037.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.3e-42 176.4 104 87.5
Solyc00g500046.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.3e-42 176.4 104 87.5
Solyc00g500081.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.3e-42 176.4 104 87.5
Solyc00g500128.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.3e-42 176.4 104 87.5
Solyc00g500198.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.3e-42 176.4 104 87.5
Solyc00g500327.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.3e-42 176.4 104 87.5
HanXRQChr11g0333821 Helianthus annuus HOM05D000445 ORTHO05D000314 1.7e-42 176.0 123 77.2
Ah.10g027230 Amaranthus hybridus HOM05D000445 ORTHO05D000314 3.8e-42 174.9 136 73.5
Ah.10g027290 Amaranthus hybridus HOM05D000445 ORTHO05D000314 3.8e-42 174.9 136 73.5
Ah.10g027420 Amaranthus hybridus HOM05D000445 ORTHO05D000314 3.8e-42 174.9 136 73.5
Ah.10g027670 Amaranthus hybridus HOM05D000445 ORTHO05D000314 3.8e-42 174.9 136 73.5
Ah.10g027730 Amaranthus hybridus HOM05D000445 ORTHO05D000314 3.8e-42 174.9 136 73.5
EL10As18g24166 Beta vulgaris HOM05D000445 ORTHO05D000314 5.0e-42 174.5 100 88.0
HanXRQChr00c0454g0574911 Helianthus annuus HOM05D000445 ORTHO05D000314 1.1e-41 173.3 98 88.8
SabraPtG0004600 Salix brachista HOM05D000445 ORTHO05D000314 1.9e-41 172.6 134 72.4
SabraPtG0006900 Salix brachista HOM05D000445 ORTHO05D000314 1.9e-41 172.6 134 72.4
C06p21350 Brassica napus HOM05D000445 ORTHO05D000314 4.2e-41 171.4 132 72.0
BolSC29t60563H Brassica oleracea HOM05D000445 ORTHO05D000314 4.2e-41 171.4 132 72.0
BolSC49t61211H Brassica oleracea HOM05D000445 ORTHO05D000314 4.2e-41 171.4 132 72.0
BraSC103t45415Z Brassica rapa HOM05D000445 ORTHO05D000314 4.2e-41 171.4 132 72.0
BraSC103t45439Z Brassica rapa HOM05D000445 ORTHO05D000314 4.2e-41 171.4 132 72.0
BraSC59t46524Z Brassica rapa HOM05D000445 ORTHO05D000314 4.2e-41 171.4 132 72.0
Peaxi162Scf00211g00218 Petunia axillaris HOM05D000445 ORTHO05D000314 7.2e-41 170.6 103 86.4
SalBow1G2507 Salvia bowleyana HOM05D000445 ORTHO05D000314 9.5e-41 170.2 133 75.2
LjContig00318g0022366 Lotus japonicus HOM05D000445 ORTHO05D000314 1.2e-40 169.9 133 69.9
LjContig00319g0026737 Lotus japonicus HOM05D000445 ORTHO05D000314 1.2e-40 169.9 133 69.9
ATR0258G003 Amborella trichopoda HOM05D000445 ORTHO05D000314 1.6e-40 169.5 111 80.2
Potri.013G143400 Populus trichocarpa HOM05D000445 ORTHO05D000314 2.1e-40 169.1 134 70.9
HanXRQChr00c0126g0571771 Helianthus annuus HOM05D000445 ORTHO05D000314 3.6e-40 168.3 124 74.2
Oeu015121.1 Olea europaea HOM05D000445 ORTHO05D000314 3.6e-40 168.3 104 82.7
Solyc09g031820.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 3.6e-40 168.3 104 82.7
ATCG00860 Arabidopsis thaliana HOM05D000445 ORTHO05D000314 6.1e-40 167.5 99 85.9
ATCG01280 Arabidopsis thaliana HOM05D000445 ORTHO05D000314 6.1e-40 167.5 99 85.9
CARHR282560 Cardamine hirsuta HOM05D000445 ORTHO05D000314 6.1e-40 167.5 99 85.9
VMungo0942G0001 Vigna mungo HOM05D000445 ORTHO05D000314 1.4e-39 166.4 103 82.5
Sed0009579 Sechium edule HOM05D000445 ORTHO05D000314 3.0e-39 165.2 134 71.6
Lalb_Chr01g0014991 Lupinus albus HOM05D000445 ORTHO05D000314 5.2e-39 164.5 144 66.7
Thhalv10001808m.g Eutrema salsugineum HOM05D000445 ORTHO05D000314 6.8e-39 164.1 123 70.7
Gorai.002G166000 Gossypium raimondii HOM05D000445 ORTHO05D000314 8.8e-39 163.7 100 85.0
Lj4g0020232 Lotus japonicus HOM05D000445 ORTHO05D000314 1.5e-38 162.9 133 69.2
RcHm_v2.0_CPg0501801 Rosa chinensis HOM05D000445 ORTHO05D000314 1.5e-38 162.9 133 69.9
RcHm_v2.0_CPg0502611 Rosa chinensis HOM05D000445 ORTHO05D000314 1.5e-38 162.9 133 69.9
AL2G20470 Arabidopsis lyrata HOM05D000445 ORTHO05D000314 2.6e-38 162.2 99 82.8
CsaV3_UNG209000 Cucumis sativus L. HOM05D000445 ORTHO05D000314 1.3e-37 159.8 134 69.4
PSO548G0004 Papaver somniferum HOM05D000445 ORTHO05D000314 1.3e-37 159.8 97 85.6
PSO548G0115 Papaver somniferum HOM05D000445 ORTHO05D000314 1.3e-37 159.8 97 85.6
Nitab4.5_0001761g0240 Nicotiana tabacum HOM05D000445 ORTHO05D000314 1.7e-37 159.5 100 83.0
HanXRQChr05g0152501 Helianthus annuus HOM05D000445 ORTHO05D000314 4.9e-37 157.9 90 87.8
Nitab4.5_0020349g0020 Nicotiana tabacum HOM05D000445 ORTHO05D000314 8.3e-37 157.1 128 67.2
LjContig00318g0009654 Lotus japonicus HOM05D000445 ORTHO05D000314 1.4e-36 156.4 93 82.8
arahy.Tifrunner.gnm1.ann1.U896IL Arachis hypogaea HOM05D000445 ORTHO05D000314 1.6e-35 152.9 134 69.4
arahy.Tifrunner.gnm1.ann1.Z1U5RE Arachis hypogaea HOM05D000445 ORTHO05D000314 1.6e-35 152.9 134 69.4
LjContig00489g0008652 Lotus japonicus HOM05D000445 ORTHO05D000314 2.0e-35 152.5 111 74.8
unitig_91.g26489 Utricularia gibba HOM05D000445 ORTHO05D000314 5.9e-35 151.0 84 88.1
Solyc00g500149.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 7.8e-35 150.6 96 79.2
BolSC29t60535H Brassica oleracea HOM05D000445 ORTHO05D000314 1.0e-34 150.2 89 84.3
BraSC143t45672Z Brassica rapa HOM05D000445 ORTHO05D000314 1.3e-34 149.8 114 71.1
CAN.G210.9 Capsicum annuum HOM05D000445 ORTHO05D000314 1.7e-34 149.4 90 84.4
Nitab4.5_0004573g0040 Nicotiana tabacum HOM05D000445 ORTHO05D000314 1.1e-33 146.7 126 68.3
Nitab4.5_0000223g0170 Nicotiana tabacum HOM05D000445 ORTHO05D000314 1.9e-33 146.0 121 69.4
BcaB02g11358 Brassica carinata HOM05D000445 ORTHO05D000314 4.3e-33 144.8 89 80.9
VMungo0976G0001 Vigna mungo HOM05D000445 ORTHO05D000314 5.6e-33 144.4 85 83.5
Solyc04g050850.3 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.6e-32 142.9 89 80.9
HanXRQChr00c0368g0574221 Helianthus annuus HOM05D000445 ORTHO05D000314 8.0e-32 140.6 83 88.0
arahy.Tifrunner.gnm1.ann1.QI67VD Arachis hypogaea HOM05D000445 ORTHO05D000314 1.0e-31 140.2 94 80.9
HanXRQChr00c0585g0576251 Helianthus annuus HOM05D000445 ORTHO05D000314 2.3e-31 139.0 83 86.7
HanXRQChr04g0127431 Helianthus annuus HOM05D000445 ORTHO05D000314 3.0e-31 138.7 81 86.4
HanXRQChr13g0416601 Helianthus annuus HOM05D000445 ORTHO05D000314 3.0e-31 138.7 81 86.4
Lsat_1_v5_gn_9_42020 Lactuca sativa HOM05D000445 ORTHO05D000314 1.2e-30 136.7 91 79.1
Nitab4.5_0022403g0020 Nicotiana tabacum HOM05D000445 ORTHO05D000314 3.4e-30 135.2 74 90.5
C09p24760 Brassica napus HOM05D000445 ORTHO05D000314 9.8e-30 133.7 82 80.5
Medtr2g019700 Medicago truncatula HOM05D000445 ORTHO05D000314 9.8e-30 133.7 94 72.3
Lsat_1_v5_gn_7_67161 Lactuca sativa HOM05D000445 ORTHO05D000314 2.2e-29 132.5 93 77.4
Hund08796 Selenicereus undatus HOM05D000445 ORTHO05D000314 2.9e-29 132.1 117 68.4
Hund10280 Selenicereus undatus HOM05D000445 ORTHO05D000314 2.9e-29 132.1 117 68.4
Hund28591 Selenicereus undatus HOM05D000445 ORTHO05D000314 2.9e-29 132.1 117 68.4
Hund28646 Selenicereus undatus HOM05D000445 ORTHO05D000314 2.9e-29 132.1 117 68.4
Hund28772 Selenicereus undatus HOM05D000445 ORTHO05D000314 2.9e-29 132.1 117 68.4
Hund29402 Selenicereus undatus HOM05D000445 ORTHO05D000314 2.9e-29 132.1 117 68.4
Hund29423 Selenicereus undatus HOM05D000445 ORTHO05D000314 2.9e-29 132.1 117 68.4
AL1G45010 Arabidopsis lyrata HOM05D000445 ORTHO05D000314 3.7e-29 131.7 83 78.3
Medtr4g047930 Medicago truncatula HOM05D000445 ORTHO05D000314 7.0e-28 127.5 116 62.9
HanXRQChr10g0284471 Helianthus annuus HOM05D000445 ORTHO05D000314 1.0e-26 123.6 80 78.8
HanXRQChr00c0448g0574791 Helianthus annuus HOM05D000445 ORTHO05D000314 1.5e-25 119.8 88 75.0
Solyc06g051370.1 Solanum lycopersicum HOM05D000445 ORTHO05D017746 1.5e-25 119.8 74 81.1
BraSC143t45643Z Brassica rapa HOM05D000445 ORTHO05D000314 1.9e-25 119.4 132 57.6
Solyc04g024540.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 7.3e-25 117.5 102 60.8
Actinidia34809 Actinidia chinensis HOM05D000445 ORTHO05D000314 2.1e-24 115.9 91 71.4
Hund11510 Selenicereus undatus HOM05D000445 ORTHO05D000314 4.7e-24 114.8 96 68.8
Hund27472 Selenicereus undatus HOM05D000445 ORTHO05D000314 6.2e-24 114.4 76 80.3
Hund01216 Selenicereus undatus HOM05D000445 ORTHO05D000314 1.0e-23 113.6 75 81.3
Hund26851 Selenicereus undatus HOM05D000445 ORTHO05D000314 1.0e-23 113.6 75 81.3
Hund19325 Selenicereus undatus HOM05D000445 ORTHO05D000314 1.4e-23 113.2 74 82.4
Hund26897 Selenicereus undatus HOM05D000445 ORTHO05D000314 1.4e-23 113.2 74 82.4
Hund29661 Selenicereus undatus HOM05D000445 ORTHO05D000314 1.4e-23 113.2 74 82.4
Hund29851 Selenicereus undatus HOM05D000445 ORTHO05D000314 1.4e-23 113.2 74 82.4
HanXRQChr00c0165g0572211 Helianthus annuus HOM05D000445 ORTHO05D000314 2.3e-23 112.5 95 68.4
HanXRQChr11g0321171 Helianthus annuus HOM05D000445 ORTHO05D000314 2.3e-23 112.5 95 68.4
HanXRQChr10g0317971 Helianthus annuus HOM05D000445 ORTHO05D000314 3.1e-23 112.1 83 74.7
Medtr1g102200 Medicago truncatula HOM05D000445 ORTHO05D000314 4.0e-23 111.7 81 70.4
BolSC47t61072H Brassica oleracea HOM05D000445 ORTHO05D000314 1.7e-21 106.3 131 58.0
HanXRQChr00c0533g0575561 Helianthus annuus HOM05D000445 ORTHO05D000314 3.7e-21 105.1 56 92.9
HanXRQChr00c0349g0573991 Helianthus annuus HOM05D000445 ORTHO05D000314 1.4e-20 103.2 54 90.7
SGA_v2.0_scaffold2596G54158 Striga asiatica HOM05D000445 ORTHO05D000314 1.4e-20 103.2 73 71.2
Gorai.011G122200 Gossypium raimondii HOM05D000445 ORTHO05D000314 2.4e-20 102.4 86 69.8
Medtr4g051435 Medicago truncatula HOM05D000445 ORTHO05D000314 3.2e-20 102.1 90 62.2
Nitab4.5_0007104g0070 Nicotiana tabacum HOM05D000445 ORTHO05D000314 5.6e-17 91.3 51 88.2
TPR.G25324 Trifolium pratense HOM05D000445 ORTHO05D015071 5.6e-17 91.3 64 71.9
HanXRQChr00c0788g0577401 Helianthus annuus HOM05D000445 ORTHO05D000314 1.2e-16 90.1 70 67.1
Hund11176 Selenicereus undatus HOM05D000445 ORTHO05D000314 1.6e-16 89.7 66 74.2
CAN.G1298.13 Capsicum annuum HOM05D000445 ORTHO05D000314 3.1e-15 85.5 51 84.3
Nitab4.5_0007979g0010 Nicotiana tabacum HOM05D000445 ORTHO05D000314 1.2e-14 83.6 69 63.8
HanXRQChr11g0336101 Helianthus annuus HOM05D000445 ORTHO05D000314 1.3e-13 80.1 55 76.4
HanXRQChr11g0336121 Helianthus annuus HOM05D000445 ORTHO05D000314 1.3e-13 80.1 55 76.4
Gohir.A12G088950 Gossypium hirsutum HOM05D000445 ORTHO05D000314 2.1e-11 72.8 129 42.6
Nn029s41592 Nelumbo nucifera HOM05D000445 ORTHO05D000314 1.0e-10 70.5 51 74.5
Nitab4.5_0003101g0070 Nicotiana tabacum HOM05D000445 ORTHO05D000314 1.3e-10 70.1 89 52.8
Hund27647 Selenicereus undatus HOM05D000445 ORTHO05D000314 1.3e-10 70.1 45 77.8
Hund29397 Selenicereus undatus HOM05D000445 ORTHO05D000314 1.3e-10 70.1 45 77.8
Hund29990 Selenicereus undatus HOM05D000445 ORTHO05D000314 1.3e-10 70.1 45 77.8
Migut.K01186 Erythranthe guttata HOM05D000445 ORTHO05D000314 1.7e-10 69.7 43 83.7
Hund29199 Selenicereus undatus HOM05D000445 ORTHO05D000314 2.3e-10 69.3 46 76.1
Migut.D01405 Erythranthe guttata HOM05D000445 ORTHO05D000314 3.9e-10 68.6 35 88.6
Nitab4.5_0014666g0060 Nicotiana tabacum HOM05D000445 ORTHO05D000314 3.3e-09 65.5 62 62.9
Nitab4.5_0007959g0010 Nicotiana tabacum HOM05D000445 ORTHO05D000314 2.1e-08 62.8 42 71.4
arahy.Tifrunner.gnm1.ann1.FTZ997 Arachis hypogaea HOM05D000445 ORTHO05D000314 5.2e-07 58.2 40 77.5
Solyc03g120370.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.2e-06 57.0 65 55.4
arahy.Tifrunner.gnm1.ann1.A0N0CH Arachis hypogaea HOM05D000445 ORTHO05D000314 7.6e-06 54.3 40 70.0


User provided reference genes

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