Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu061703.1 Olea europaea HOM05D000072 ORTHO05D000026 2.0e-132 475.7 228 100.0
Dinv08180 Davidia involucrata HOM05D000072 ORTHO05D000026 5.9e-44 181.8 171 56.7
Oeu061701.1 Olea europaea HOM05D000072 ORTHO05D000026 2.4e-29 133.3 374 30.5
Rhsim11G0030900 Rhododendron simsii HOM05D000072 ORTHO05D000026 1.7e-27 127.1 98 64.3
RhsimUnG0158600 Rhododendron simsii HOM05D000072 ORTHO05D000026 2.9e-27 126.3 95 66.3
RhsimUnG0158500 Rhododendron simsii HOM05D000072 ORTHO05D000026 7.3e-26 121.7 122 54.1
Rhsim11G0031100 Rhododendron simsii HOM05D000072 ORTHO05D000026 1.2e-25 120.9 94 63.8
Rhsim01G0063100 Rhododendron simsii HOM05D000072 ORTHO05D000026 2.8e-25 119.8 105 58.1
Rhsim11G0030700 Rhododendron simsii HOM05D000072 ORTHO05D000026 2.8e-25 119.8 122 53.3
Dinv00928 Davidia involucrata HOM05D000072 ORTHO05D000026 1.4e-24 117.5 100 65.0
Dinv00929 Davidia involucrata HOM05D008376 ORTHO05D000026 1.4e-24 117.5 100 65.0
Dinv05069 Davidia involucrata HOM05D000072 ORTHO05D000026 1.4e-24 117.5 100 65.0
Dinv07771 Davidia involucrata HOM05D008376 ORTHO05D000026 1.4e-24 117.5 100 65.0
vmacro00249 Vaccinium macrocarpon HOM05D000072 ORTHO05D000026 3.1e-24 116.3 114 55.3
vmacro00250 Vaccinium macrocarpon HOM05D000072 ORTHO05D000026 3.1e-24 116.3 114 55.3
GSVIVG01035532001 Vitis vinifera HOM05D000072 ORTHO05D000026 1.5e-23 114.0 117 53.0
Migut.D00668 Erythranthe guttata HOM05D000072 ORTHO05D000026 2.0e-23 113.6 95 57.9
TAR641G0002 Trochodendron aralioides HOM05D000072 ORTHO05D000026 7.5e-23 111.7 98 61.2
Rhsim11G0029800 Rhododendron simsii HOM05D000072 ORTHO05D000026 1.7e-22 110.5 97 57.7
CSS0030677 Camellia sinensis var. sinensis HOM05D000072 ORTHO05D000026 2.2e-22 110.2 93 60.2
MSTRG.17635 Avicennia marina HOM05D000072 ORTHO05D000026 2.9e-22 109.8 96 56.2
CSS0012927 Camellia sinensis var. sinensis HOM05D000072 ORTHO05D000026 2.9e-22 109.8 96 58.3
vmacro00247 Vaccinium macrocarpon HOM05D000072 ORTHO05D000026 2.9e-22 109.8 112 54.5
Lj7P742T19 Lonicera japonica HOM05D000072 ORTHO05D000026 3.7e-22 109.4 97 60.8
TAR050G0003 Trochodendron aralioides HOM05D000072 ORTHO05D000026 3.7e-22 109.4 98 60.2
TAR047G0001 Trochodendron aralioides HOM05D000072 ORTHO05D000026 1.9e-21 107.1 98 60.2
vmacro00246 Vaccinium macrocarpon HOM05D000072 ORTHO05D000026 7.0e-21 105.1 93 59.1
vmacro00262 Vaccinium macrocarpon HOM05D000072 ORTHO05D000026 2.0e-20 103.6 77 68.8
TAR383G0101 Trochodendron aralioides HOM05D000072 ORTHO05D000026 3.5e-20 102.8 96 61.5
Cfa013764 Carpinus fangiana HOM05D000072 ORTHO05D000026 7.8e-20 101.7 180 36.1
vmacro00258 Vaccinium macrocarpon HOM05D000072 ORTHO05D000026 2.3e-19 100.1 83 62.7
vmacro00251 Vaccinium macrocarpon HOM05D000072 ORTHO05D000026 1.1e-18 97.8 157 38.2
Rhsim11G0031500 Rhododendron simsii HOM05D000072 ORTHO05D000026 1.5e-18 97.4 325 27.1
CSS0049233 Camellia sinensis var. sinensis HOM05D000072 ORTHO05D000026 9.5e-18 94.7 96 52.1
Dinv41213 Davidia involucrata HOM05D000072 ORTHO05D000026 4.7e-17 92.4 167 35.3
PSO170G4127 Papaver somniferum HOM05D000072 ORTHO05D000026 4.7e-17 92.4 101 52.5
vmacro00248 Vaccinium macrocarpon HOM05D000072 ORTHO05D000026 8.1e-17 91.7 76 61.8
CSS0030037 Camellia sinensis var. sinensis HOM05D000072 ORTHO05D000026 1.8e-16 90.5 96 50.0
MELO3C003634.2 Cucumis melo HOM05D000072 ORTHO05D000026 2.3e-16 90.1 99 53.5
CsaV3_3G047020 Cucumis sativus L. HOM05D000072 ORTHO05D000026 4.0e-16 89.4 99 52.5
Sed0006004 Sechium edule HOM05D000072 ORTHO05D000026 2.6e-15 86.7 102 51.0
Ciclev10010482m.g Citrus clementina HOM05D000072 ORTHO05D000026 5.8e-15 85.5 92 48.9
Sed0012290 Sechium edule HOM05D000072 ORTHO05D000026 5.8e-15 85.5 103 50.5
PSO063G2928 Papaver somniferum HOM05D000072 ORTHO05D000026 7.5e-15 85.1 95 51.6
CSS0025730 Camellia sinensis var. sinensis HOM05D000072 ORTHO05D000026 2.2e-14 83.6 96 45.8
CiPaw.08G019200 Carya illinoinensis HOM05D000072 ORTHO05D000026 2.2e-14 83.6 76 56.6
PSO170G2699 Papaver somniferum HOM05D000072 ORTHO05D000026 4.9e-14 82.4 96 49.0
Ciclev10010327m.g Citrus clementina HOM05D000072 ORTHO05D000026 6.4e-14 82.0 92 47.8
Sed0024060 Sechium edule HOM05D000072 ORTHO05D000026 1.1e-13 81.3 91 49.5
MELO3C003635.2 Cucumis melo HOM05D000072 ORTHO05D000026 1.4e-13 80.9 96 50.0
CSS0007695 Camellia sinensis var. sinensis HOM05D000072 ORTHO05D000026 3.2e-13 79.7 97 47.4
CSS0031705 Camellia sinensis var. sinensis HOM05D000072 ORTHO05D000026 3.2e-13 79.7 97 47.4
CsaV3_3G047030 Cucumis sativus L. HOM05D000072 ORTHO05D000026 3.2e-13 79.7 113 46.9
Lj7P742T17 Lonicera japonica HOM05D000072 ORTHO05D000026 3.2e-13 79.7 97 45.4
ClCG05G017520 Citrullus lanatus HOM05D000072 ORTHO05D000026 4.1e-13 79.3 93 48.4
MELO3C003632.2 Cucumis melo HOM05D000072 ORTHO05D000026 4.1e-13 79.3 86 52.3
CSS0004032 Camellia sinensis var. sinensis HOM05D000072 ORTHO05D000026 9.2e-13 78.2 96 45.8
MELO3C003633.2 Cucumis melo HOM05D000072 ORTHO05D000026 1.6e-12 77.4 105 45.7
TAR054G0001 Trochodendron aralioides HOM05D000072 ORTHO05D000026 2.7e-12 76.6 75 60.0
CsaV3_3G047040 Cucumis sativus L. HOM05D000072 ORTHO05D000026 3.5e-12 76.3 75 50.7
CsaV3_3G047010 Cucumis sativus L. HOM05D000072 ORTHO05D000026 6.0e-12 75.5 106 49.1
Sed0019573 Sechium edule HOM05D000072 ORTHO05D000026 6.0e-12 75.5 95 48.4
Sed0016341 Sechium edule HOM05D000072 ORTHO05D000026 7.8e-12 75.1 100 46.0
TAR626G1178 Trochodendron aralioides HOM05D000072 ORTHO05D000026 1.3e-11 74.3 96 43.8
Nn1g06170 Nelumbo nucifera HOM05D000072 ORTHO05D000026 5.1e-11 72.4 66 57.6
Nn1g06169 Nelumbo nucifera HOM05D000072 ORTHO05D000026 1.1e-10 71.2 66 56.1
RhsimUnG0199400 Rhododendron simsii HOM05D000072 ORTHO05D000026 1.1e-10 71.2 75 52.0
Ciclev10010766m.g Citrus clementina HOM05D000072 ORTHO05D000026 1.5e-10 70.9 54 63.0
RhsimUnG0056100 Rhododendron simsii HOM05D000072 ORTHO05D000026 1.5e-10 70.9 75 52.0
Sed0000625 Sechium edule HOM05D000072 ORTHO05D000026 4.3e-10 69.3 94 41.5
Aqoxy7G03008 Aquilegia oxysepala HOM05D000072 ORTHO05D000026 3.6e-09 66.2 84 44.0
vmacro00261 Vaccinium macrocarpon HOM05D000072 ORTHO05D000026 4.7e-09 65.9 64 54.7
TWI34G1782 Tripterygium wilfordii HOM05D000072 ORTHO05D000026 6.2e-09 65.5 67 47.8
CiPaw.07G193500 Carya illinoinensis HOM05D000072 ORTHO05D000026 1.8e-08 63.9 94 38.3
TAR626G0014 Trochodendron aralioides HOM05D000072 ORTHO05D000026 5.2e-08 62.4 94 40.4
Haze_22421 Corylus avellana HOM05D000072 ORTHO05D000026 6.8e-08 62.0 88 37.5
TAR054G0002 Trochodendron aralioides HOM05D000072 ORTHO05D000026 6.8e-08 62.0 68 45.6
ECA240G0724 Erigeron canadensis HOM05D000072 ORTHO05D000026 8.9e-08 61.6 88 38.6
MD13G1251000 Malus domestica HOM05D000072 ORTHO05D000026 8.9e-08 61.6 100 38.0
GSVIVG01027832001 Vitis vinifera HOM05D000072 ORTHO05D000026 8.9e-08 61.6 55 52.7
MBI14_g43824_MAGBIO Magnolia biondii HOM05D000072 ORTHO05D000026 1.2e-07 61.2 73 50.7
PSO063G7432 Papaver somniferum HOM05D000072 ORTHO05D000026 1.5e-07 60.8 82 40.2
TPR.G32619 Trifolium pratense HOM05D000072 ORTHO05D000026 1.5e-07 60.8 63 42.9
TWI60G0669 Tripterygium wilfordii HOM05D000072 ORTHO05D000026 1.5e-07 60.8 54 53.7
AUR62029601 Chenopodium quinoa HOM05D000072 ORTHO05D000026 2.0e-07 60.5 57 49.1
Sc04g0000610 Simmondsia chinensis HOM05D000072 ORTHO05D000026 2.0e-07 60.5 61 45.9
Haze_22422 Corylus avellana HOM05D000323 ORTHO05D000201 2.6e-07 60.1 59 45.8
Prupe.1G083300 Prunus persica HOM05D000072 ORTHO05D000026 2.6e-07 60.1 97 41.2
Aqoxy7G02959 Aquilegia oxysepala HOM05D000072 ORTHO05D000026 3.4e-07 59.7 99 37.4
Hma1.2p1_1303F.1_g274465 Hydrangea macrophylla HOM05D000072 ORTHO05D000026 3.4e-07 59.7 48 58.3
MD13G1250100 Malus domestica HOM05D000072 ORTHO05D000026 3.4e-07 59.7 104 36.5
QL02p098276 Quercus lobata HOM05D000072 ORTHO05D000026 3.4e-07 59.7 59 44.1
Sopen11g003290 Solanum pennellii HOM05D000072 ORTHO05D000026 3.4e-07 59.7 159 27.0
MBI14_g17389_MAGBIO Magnolia biondii HOM05D000072 ORTHO05D000026 4.4e-07 59.3 68 54.4
Os06g0241100 Oryza sativa ssp. japonica HOM05D000072 ORTHO05D000026 4.4e-07 59.3 55 49.1
CAN.G809.90 Capsicum annuum HOM05D000072 ORTHO05D000026 5.8e-07 58.9 139 28.8
COL.COLO4_12957 Corchorus olitorius HOM05D000038 ORTHO05D000423 5.8e-07 58.9 107 32.7
Hma1.2p1_1303F.1_g274460 Hydrangea macrophylla HOM05D000072 ORTHO05D000026 5.8e-07 58.9 59 47.5
VMungo1309G2964 Vigna mungo HOM05D000072 ORTHO05D000026 5.8e-07 58.9 82 46.3
Prupe.1G083000 Prunus persica HOM05D000072 ORTHO05D000026 7.6e-07 58.5 103 36.9
Prupe.1G083100 Prunus persica HOM05D000072 ORTHO05D000026 7.6e-07 58.5 103 36.9
ECA240G3997 Erigeron canadensis HOM05D000072 ORTHO05D000026 1.3e-06 57.8 88 36.4
Eucgr.K00436 Eucalyptus grandis HOM05D000072 ORTHO05D000026 1.3e-06 57.8 139 28.8
Hma1.2p1_2991F.1_g331340 Hydrangea macrophylla HOM05D000072 ORTHO05D000026 1.3e-06 57.8 67 47.8
Lj7P742T18 Lonicera japonica HOM05D000072 ORTHO05D000026 1.3e-06 57.8 48 58.3
Solyc11g007430.3 Solanum lycopersicum HOM05D000072 ORTHO05D000026 1.3e-06 57.8 159 26.4
Nitab4.5_0000108g0090 Nicotiana tabacum HOM05D000072 ORTHO05D000026 1.7e-06 57.4 138 27.5
RcHm_v2.0_Chr4g0401361 Rosa chinensis HOM05D000072 ORTHO05D000026 1.7e-06 57.4 56 50.0
GSVIVG01024382001 Vitis vinifera HOM05D000329 ORTHO05D002813 1.7e-06 57.4 54 50.0
CiPaw.07G193400 Carya illinoinensis HOM05D000072 ORTHO05D000026 2.2e-06 57.0 54 50.0
AUR62021881 Chenopodium quinoa HOM05D000038 ORTHO05D009636 2.2e-06 57.0 127 31.5
DCAR_008002 Daucus carota HOM05D000072 ORTHO05D000026 2.2e-06 57.0 67 40.3
Lj6g0000115 Lotus japonicus HOM05D000072 ORTHO05D000026 2.2e-06 57.0 83 34.9
Medtr2g036460 Medicago truncatula HOM05D000072 ORTHO05D000026 2.2e-06 57.0 66 40.9
Ah.11g045460 Amaranthus hybridus HOM05D000072 ORTHO05D000026 2.9e-06 56.6 73 42.5
ATR1079G001 Amborella trichopoda HOM05D000072 ORTHO05D000026 2.9e-06 56.6 65 41.5
EL10Ac6g13841 Beta vulgaris HOM05D000072 ORTHO05D000026 2.9e-06 56.6 54 46.3
DCAR_007992 Daucus carota HOM05D000072 ORTHO05D000026 2.9e-06 56.6 62 43.5
Phvul.009G239800 Phaseolus vulgaris HOM05D000072 ORTHO05D000026 2.9e-06 56.6 74 45.9
RcHm_v2.0_Chr1g0326841 Rosa chinensis HOM05D000072 ORTHO05D000026 2.9e-06 56.6 72 45.8
Eucgr.K00368 Eucalyptus grandis HOM05D000072 ORTHO05D000026 3.7e-06 56.2 142 29.6
Glyma.15G161700 Glycine max HOM05D000072 ORTHO05D000026 3.7e-06 56.2 77 45.5
Gohir.A05G004232 Gossypium hirsutum HOM05D000072 ORTHO05D000026 3.7e-06 56.2 54 50.0
Lj1g0011022 Lotus japonicus HOM05D000072 ORTHO05D000026 3.7e-06 56.2 84 38.1
Duzib150G1131 Durio zibethinus HOM05D000072 ORTHO05D000026 4.9e-06 55.8 54 50.0
Duzib150G1223 Durio zibethinus HOM05D000072 ORTHO05D000026 4.9e-06 55.8 54 50.0
PSO170G0807 Papaver somniferum HOM05D000072 ORTHO05D000026 4.9e-06 55.8 59 49.2
Thecc.07G179600 Theobroma cacao HOM05D000072 ORTHO05D000026 4.9e-06 55.8 77 42.9
HPP92_010768 Vanilla planifolia HOM05D000072 ORTHO05D000026 4.9e-06 55.8 93 44.1
Zm00001eb005570 Zea mays HOM05D000072 ORTHO05D000026 4.9e-06 55.8 54 50.0
Aqoxy3G03793 Aquilegia oxysepala HOM05D000072 ORTHO05D000026 6.4e-06 55.5 58 39.7
arahy.Tifrunner.gnm1.ann1.60SZUC Arachis hypogaea HOM05D000072 ORTHO05D000026 6.4e-06 55.5 75 40.0
arahy.Tifrunner.gnm1.ann1.YWVW6N Arachis hypogaea HOM05D000072 ORTHO05D000026 6.4e-06 55.5 75 40.0
EL10Ac6g13840 Beta vulgaris HOM05D000072 ORTHO05D000026 6.4e-06 55.5 54 46.3
Haze_16649 Corylus avellana HOM05D000072 ORTHO05D000026 6.4e-06 55.5 54 50.0
DCAR_008004 Daucus carota HOM05D000072 ORTHO05D000026 6.4e-06 55.5 47 51.1
Eucgr.K00369 Eucalyptus grandis HOM05D000072 ORTHO05D000026 6.4e-06 55.5 140 25.7
Gohir.D05G004700 Gossypium hirsutum HOM05D000072 ORTHO05D000026 6.4e-06 55.5 94 35.1
Gorai.009G004500 Gossypium raimondii HOM05D000072 ORTHO05D000026 6.4e-06 55.5 94 35.1
Lj6g0003864 Lotus japonicus HOM05D000072 ORTHO05D000026 6.4e-06 55.5 64 42.2
RcHm_v2.0_Chr4g0401211 Rosa chinensis HOM05D000072 ORTHO05D000026 6.4e-06 55.5 54 50.0
PGSC0003DMG400020899 Solanum tuberosum HOM05D000072 ORTHO05D000026 6.4e-06 55.5 138 27.5
ATR0580G274 Amborella trichopoda HOM05D000072 ORTHO05D000026 8.4e-06 55.1 45 60.0
CAN.G809.84 Capsicum annuum HOM05D000072 ORTHO05D000026 8.4e-06 55.1 138 29.0
CiPaw.04G095800 Carya illinoinensis HOM05D000072 ORTHO05D000026 8.4e-06 55.1 143 28.0
Ca_12700_v3 Cicer arietinum L. HOM05D000072 ORTHO05D000026 8.4e-06 55.1 138 27.5
Ca_12702_v3 Cicer arietinum L. HOM05D000072 ORTHO05D000026 8.4e-06 55.1 138 27.5
Ca_29806_v3 Cicer arietinum L. HOM05D000072 ORTHO05D000026 8.4e-06 55.1 138 27.5
Ca_29807_v3 Cicer arietinum L. HOM05D000072 ORTHO05D000026 8.4e-06 55.1 138 27.5
Haze_16648 Corylus avellana HOM05D000072 ORTHO05D000026 8.4e-06 55.1 54 50.0
DCAR_007990 Daucus carota HOM05D000072 ORTHO05D000026 8.4e-06 55.1 47 48.9
Eucgr.K00439 Eucalyptus grandis HOM05D000072 ORTHO05D000026 8.4e-06 55.1 139 27.3
Eucgr.K01113 Eucalyptus grandis HOM05D000072 ORTHO05D000026 8.4e-06 55.1 171 25.1
Eucgr.L00530 Eucalyptus grandis HOM05D000072 ORTHO05D000026 8.4e-06 55.1 140 26.4
FvH4_4g07910 Fragaria vesca HOM05D000072 ORTHO05D000026 8.4e-06 55.1 54 50.0
FvH4_4g22030 Fragaria vesca HOM05D000072 ORTHO05D000026 8.4e-06 55.1 75 44.0
FAN07G2031 Fragaria x ananassa HOM05D000072 ORTHO05D000026 8.4e-06 55.1 54 50.0
Glyma.15G161500 Glycine max HOM05D000072 ORTHO05D000026 8.4e-06 55.1 54 48.1
Medtr1g027540 Medicago truncatula HOM05D000072 ORTHO05D000026 8.4e-06 55.1 174 25.9
Phvul.001G075800 Phaseolus vulgaris HOM05D000072 ORTHO05D000026 8.4e-06 55.1 44 54.5
Psat1g147480 Pisum sativum HOM05D000072 ORTHO05D000026 8.4e-06 55.1 54 48.1
Prupe.2G088800 Prunus persica HOM05D000072 ORTHO05D000026 8.4e-06 55.1 80 38.8
RcHm_v2.0_Chr1g0326851 Rosa chinensis HOM05D000072 ORTHO05D000026 8.4e-06 55.1 94 36.2


User provided reference genes

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