Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu061668.1 Olea europaea HOM05D004003 ORTHO05D004595 1.6e-97 359.4 177 100.0
Oeu003331.1 Olea europaea HOM05D004003 ORTHO05D004595 4.5e-92 341.3 178 94.9
Cc02_g02230 Coffea canephora HOM05D004003 ORTHO05D004595 8.0e-89 330.5 179 91.1
Migut.F01081 Erythranthe guttata HOM05D004003 ORTHO05D004595 6.3e-86 320.9 179 87.2
Nitab4.5_0011314g0010 Nicotiana tabacum HOM05D004003 ORTHO05D004595 2.4e-85 318.9 177 91.0
MSTRG.8697 Avicennia marina HOM05D004003 ORTHO05D004595 9.1e-85 317.0 179 87.2
Peaxi162Scf00444g00034 Petunia axillaris HOM05D004003 ORTHO05D004595 9.1e-85 317.0 177 88.1
SalBow2G3526 Salvia bowleyana HOM05D004003 ORTHO05D004595 3.8e-83 311.6 179 83.8
Sopen03g003590 Solanum pennellii HOM05D004003 ORTHO05D004595 3.8e-83 311.6 177 87.6
Solyc03g007660.4 Solanum lycopersicum HOM05D004003 ORTHO05D004595 8.6e-83 310.5 177 87.0
CAN.G126.15 Capsicum annuum HOM05D004003 ORTHO05D004595 1.1e-82 310.1 177 87.0
SGA_v2.0_scaffold10G05280 Striga asiatica HOM05D004003 ORTHO05D004595 1.5e-82 309.7 179 86.0
CSS0000705 Camellia sinensis var. sinensis HOM05D004003 ORTHO05D004595 1.6e-81 306.2 178 86.5
Sopen06g012130 Solanum pennellii HOM05D004003 ORTHO05D004595 1.6e-81 306.2 177 85.3
DCAR_010652 Daucus carota HOM05D004003 ORTHO05D004595 2.1e-81 305.8 174 85.6
Solyc06g036350.3 Solanum lycopersicum HOM05D004003 ORTHO05D004595 6.1e-81 304.3 177 84.7
PGSC0003DMG400028905 Solanum tuberosum HOM05D004003 ORTHO05D004595 6.1e-81 304.3 177 85.9
Rhsim03G0192400 Rhododendron simsii HOM05D004003 ORTHO05D004595 1.8e-80 302.8 173 86.7
Actinidia08590 Actinidia chinensis HOM05D004003 ORTHO05D004595 4.0e-80 301.6 177 84.2
Hma1.2p1_1713F.1_g298900 Hydrangea macrophylla HOM05D004003 ORTHO05D004595 2.0e-79 299.3 176 85.2
Lsat_1_v5_gn_9_56860 Lactuca sativa HOM05D004003 ORTHO05D004595 7.5e-79 297.4 172 85.5
Rhsim09G0201100 Rhododendron simsii HOM05D004003 ORTHO05D004595 7.5e-79 297.4 178 83.7
Nitab4.5_0000472g0260 Nicotiana tabacum HOM05D004003 ORTHO05D004595 9.8e-79 297.0 157 93.0
Actinidia03142 Actinidia chinensis HOM05D004003 ORTHO05D004595 4.9e-78 294.7 170 84.1
Actinidia31844 Actinidia chinensis HOM05D004003 ORTHO05D004595 8.3e-78 293.9 170 84.1
Hund13071 Selenicereus undatus HOM05D004003 ORTHO05D004595 8.3e-78 293.9 176 82.4
HanXRQChr15g0494181 Helianthus annuus HOM05D004003 ORTHO05D004595 1.1e-77 293.5 172 84.3
Duzib205G1856 Durio zibethinus HOM05D004003 ORTHO05D004595 1.4e-77 293.1 176 82.4
COL.COLO4_30289 Corchorus olitorius HOM05D004003 ORTHO05D004595 2.4e-77 292.4 177 82.5
Gohir.D11G013100 Gossypium hirsutum HOM05D004003 ORTHO05D004595 3.2e-77 292.0 176 81.8
unitig_0.g1158 Utricularia gibba HOM05D004003 ORTHO05D004595 3.2e-77 292.0 161 84.5
Duzib084G0289 Durio zibethinus HOM05D004003 ORTHO05D004595 5.4e-77 291.2 172 83.1
Lsat_1_v5_gn_2_131500 Lactuca sativa HOM05D004003 ORTHO05D004595 7.0e-77 290.8 177 81.9
Sc14g0006860 Simmondsia chinensis HOM05D004003 ORTHO05D004595 7.0e-77 290.8 176 82.4
Lj1A1007T57 Lonicera japonica HOM05D004003 ORTHO05D004595 1.6e-76 289.7 181 80.1
Lj1A1007T58 Lonicera japonica HOM05D004003 ORTHO05D004595 1.6e-76 289.7 181 80.1
ECA232G1033 Erigeron canadensis HOM05D004003 ORTHO05D004595 2.0e-76 289.3 170 82.4
Gohir.A11G012800 Gossypium hirsutum HOM05D004003 ORTHO05D004595 5.9e-76 287.7 176 80.1
Gorai.008G273600 Gossypium raimondii HOM05D004003 ORTHO05D004595 5.9e-76 287.7 176 81.8
Thecc.03G186200 Theobroma cacao HOM05D004003 ORTHO05D004595 5.9e-76 287.7 176 81.8
Dinv35269 Davidia involucrata HOM05D004003 ORTHO05D004595 1.3e-75 286.6 162 87.7
Gorai.007G013400 Gossypium raimondii HOM05D004003 ORTHO05D004595 2.9e-75 285.4 178 80.9
Aqoxy7G00202 Aquilegia oxysepala HOM05D004003 ORTHO05D004595 5.0e-75 284.6 176 80.7
EL10Ac2g03211 Beta vulgaris HOM05D004003 ORTHO05D004595 5.0e-75 284.6 176 80.1
CsaV3_3G017590 Cucumis sativus L. HOM05D004003 ORTHO05D004595 5.0e-75 284.6 166 84.3
Gohir.D12G255500 Gossypium hirsutum HOM05D004003 ORTHO05D004595 5.0e-75 284.6 176 80.7
Gohir.D12G255550 Gossypium hirsutum HOM05D004003 ORTHO05D004595 5.0e-75 284.6 176 80.7
Sed0014667 Sechium edule HOM05D004003 ORTHO05D004595 5.0e-75 284.6 167 83.8
DCAR_020275 Daucus carota HOM05D004003 ORTHO05D004595 6.6e-75 284.3 155 87.7
Eucgr.A02717 Eucalyptus grandis HOM05D004003 ORTHO05D004595 6.6e-75 284.3 176 78.4
Lj2g0001989 Lotus japonicus HOM05D004003 ORTHO05D004595 6.6e-75 284.3 176 80.7
Sed0009881 Sechium edule HOM05D004003 ORTHO05D004595 6.6e-75 284.3 159 86.2
Lalb_Chr19g0130491 Lupinus albus HOM05D004003 ORTHO05D004595 1.9e-74 282.7 175 80.6
Ciclev10006072m.g Citrus clementina HOM05D004003 ORTHO05D004595 2.5e-74 282.3 176 80.7
MELO3C006949.2 Cucumis melo HOM05D004003 ORTHO05D004595 2.5e-74 282.3 152 88.8
CiPaw.06G004300 Carya illinoinensis HOM05D004003 ORTHO05D004595 5.6e-74 281.2 176 79.5
Manes.06G153700 Manihot esculenta HOM05D004003 ORTHO05D004595 7.3e-74 280.8 176 80.7
ClCG05G008500 Citrullus lanatus HOM05D004003 ORTHO05D004595 1.2e-73 280.0 152 87.5
Ah.11g045360 Amaranthus hybridus HOM05D004003 ORTHO05D004595 1.6e-73 279.6 165 82.4
Atru.chr1.335 Acer truncatum HOM05D004003 ORTHO05D004595 2.1e-73 279.3 176 79.0
GSVIVG01028820001 Vitis vinifera HOM05D004003 ORTHO05D004595 2.1e-73 279.3 176 79.5
ECA233G0998 Erigeron canadensis HOM05D004003 ORTHO05D004595 2.8e-73 278.9 168 83.3
Gohir.A12G253200 Gossypium hirsutum HOM05D004003 ORTHO05D004595 3.6e-73 278.5 176 79.0
arahy.Tifrunner.gnm1.ann1.SB31NP Arachis hypogaea HOM05D004003 ORTHO05D004595 4.7e-73 278.1 176 80.1
Manes.14G021000 Manihot esculenta HOM05D004003 ORTHO05D004595 4.7e-73 278.1 176 78.4
Lalb_Chr03g0034981 Lupinus albus HOM05D004003 ORTHO05D004595 1.4e-72 276.6 175 79.4
THA.LOC104800278 Tarenaya hassleriana HOM05D004003 ORTHO05D004595 1.4e-72 276.6 174 78.7
Thhalv10026409m.g Eutrema salsugineum HOM05D004003 ORTHO05D004595 2.3e-72 275.8 176 77.3
vmacro06614 Vaccinium macrocarpon HOM05D004003 ORTHO05D004595 2.3e-72 275.8 230 63.9
PGR042G1718 Punica granatum HOM05D004003 ORTHO05D004595 4.0e-72 275.0 176 78.4
Prupe.2G302600 Prunus persica HOM05D004003 ORTHO05D004595 5.2e-72 274.6 176 78.4
QL09p012375 Quercus lobata HOM05D004003 ORTHO05D004595 5.2e-72 274.6 176 76.7
arahy.Tifrunner.gnm1.ann1.R03NAB Arachis hypogaea HOM05D004003 ORTHO05D004595 6.8e-72 274.2 176 79.0
Glyma.09G129000 Glycine max HOM05D004003 ORTHO05D004595 6.8e-72 274.2 176 79.5
THA.LOC104825117 Tarenaya hassleriana HOM05D004003 ORTHO05D004595 1.2e-71 273.5 176 78.4
RcHm_v2.0_Chr1g0378851 Rosa chinensis HOM05D004003 ORTHO05D004595 1.5e-71 273.1 176 77.3
Sp7g25950 Schrenkiella parvula HOM05D004003 ORTHO05D004595 1.5e-71 273.1 176 76.1
FAN10G2159 Fragaria x ananassa HOM05D004003 ORTHO05D004595 2.0e-71 272.7 176 76.7
Phvul.004G105700 Phaseolus vulgaris HOM05D004003 ORTHO05D004595 2.0e-71 272.7 171 78.4
TAR629G0127 Trochodendron aralioides HOM05D004003 ORTHO05D004595 2.0e-71 272.7 176 78.4
Potri.004G071900 Populus trichocarpa HOM05D004003 ORTHO05D004595 2.6e-71 272.3 176 76.7
AUR62037745 Chenopodium quinoa HOM05D004003 ORTHO05D004595 3.4e-71 271.9 176 78.4
FvH4_7g30480 Fragaria vesca HOM05D004003 ORTHO05D004595 3.4e-71 271.9 176 76.7
FAN01G1512 Fragaria x ananassa HOM05D004003 ORTHO05D004595 3.4e-71 271.9 176 76.7
FAN06G3020 Fragaria x ananassa HOM05D004003 ORTHO05D004595 3.4e-71 271.9 176 76.7
FAN03G0349 Fragaria x ananassa HOM05D004003 ORTHO05D004595 4.4e-71 271.6 176 76.1
FAN03G2611 Fragaria x ananassa HOM05D004003 ORTHO05D004595 4.4e-71 271.6 176 76.1
Thhalv10014849m.g Eutrema salsugineum HOM05D004003 ORTHO05D004595 5.8e-71 271.2 176 77.3
PSO017G3679 Papaver somniferum HOM05D004003 ORTHO05D004595 5.8e-71 271.2 177 76.3
TWI23G0858 Tripterygium wilfordii HOM05D004003 ORTHO05D004595 7.5e-71 270.8 165 82.4
VMungo0464G2050 Vigna mungo HOM05D004003 ORTHO05D004595 7.5e-71 270.8 176 77.3
TWI14G1326 Tripterygium wilfordii HOM05D004003 ORTHO05D004595 9.8e-71 270.4 154 86.4
FAN06G1184 Fragaria x ananassa HOM05D004003 ORTHO05D004595 1.3e-70 270.0 176 76.1
FAN10G2319 Fragaria x ananassa HOM05D004003 ORTHO05D004595 1.3e-70 270.0 176 76.1
BcaB01g04212 Brassica carinata HOM05D004003 ORTHO05D004595 2.2e-70 269.2 176 75.6
Nn6g32413 Nelumbo nucifera HOM05D004003 ORTHO05D004595 2.2e-70 269.2 166 80.1
MD01G1210300 Malus domestica HOM05D004003 ORTHO05D004595 2.9e-70 268.9 176 75.0
MD07G1280400 Malus domestica HOM05D004003 ORTHO05D004595 2.9e-70 268.9 161 80.7
AL8G27280 Arabidopsis lyrata HOM05D004003 ORTHO05D004595 3.7e-70 268.5 176 76.7
CARHR265770 Cardamine hirsuta HOM05D004003 ORTHO05D004595 4.9e-70 268.1 151 84.8
Aa31LG3G9080 Aethionema arabicum HOM05D004003 ORTHO05D004595 6.4e-70 267.7 176 75.6
BraA03t10847Z Brassica rapa HOM05D004003 ORTHO05D004595 6.4e-70 267.7 151 84.1
PSO478G4828 Papaver somniferum HOM05D004003 ORTHO05D004595 1.1e-69 266.9 180 75.6
Psat5g299680 Pisum sativum HOM05D004003 ORTHO05D004595 2.4e-69 265.8 183 73.8
AT5G52840 Arabidopsis thaliana HOM05D004003 ORTHO05D004595 3.2e-69 265.4 176 75.6
A03p15550 Brassica napus HOM05D004003 ORTHO05D004595 3.2e-69 265.4 151 83.4
Sabra04G0047300 Salix brachista HOM05D004003 ORTHO05D004595 3.2e-69 265.4 176 76.1
BcaC01g06202 Brassica carinata HOM05D004003 ORTHO05D004595 5.4e-69 264.6 153 82.4
C03p18160 Brassica napus HOM05D004003 ORTHO05D004595 5.4e-69 264.6 153 82.4
BraA10t43109Z Brassica rapa HOM05D004003 ORTHO05D004595 5.4e-69 264.6 151 82.8
BcaB08g35638 Brassica carinata HOM05D004003 ORTHO05D004595 7.0e-69 264.2 151 82.8
Sp6g15000 Schrenkiella parvula HOM05D004003 ORTHO05D004595 7.0e-69 264.2 176 75.0
BolC3t14217H Brassica oleracea HOM05D004003 ORTHO05D004595 9.2e-69 263.8 151 82.8
Carub.0008s1300 Capsella rubella HOM05D004003 ORTHO05D004595 9.2e-69 263.8 176 74.4
Dinv28379 Davidia involucrata HOM05D004003 ORTHO05D004595 9.2e-69 263.8 148 86.5
Psat0s1604g0040 Pisum sativum HOM05D004003 ORTHO05D004595 1.2e-68 263.5 183 72.7
BcaC04g20535 Brassica carinata HOM05D004003 ORTHO05D004595 2.0e-68 262.7 151 82.8
A02p11580 Brassica napus HOM05D004003 ORTHO05D004595 2.0e-68 262.7 174 75.3
C09p42440 Brassica napus HOM05D004003 ORTHO05D004595 2.0e-68 262.7 151 82.8
BraA02t06220Z Brassica rapa HOM05D004003 ORTHO05D004595 2.0e-68 262.7 174 75.3
CANSAT21G1389 Cannabis sativa HOM05D004003 ORTHO05D004595 2.7e-68 262.3 176 72.2
CANSAT21G1446 Cannabis sativa HOM05D004003 ORTHO05D004595 2.7e-68 262.3 176 72.2
Potri.017G149100 Populus trichocarpa HOM05D004003 ORTHO05D004595 2.7e-68 262.3 176 73.9
A10p10290 Brassica napus HOM05D004003 ORTHO05D004595 6.0e-68 261.2 151 82.1
BcaB05g21985 Brassica carinata HOM05D004003 ORTHO05D004595 1.0e-67 260.4 162 78.4
TPR.G27150 Trifolium pratense HOM05D004003 ORTHO05D004595 1.7e-67 259.6 183 72.1
Sabra17G0124400 Salix brachista HOM05D004003 ORTHO05D004595 3.0e-67 258.8 175 72.6
Ca_20595_v3 Cicer arietinum L. HOM05D004003 ORTHO05D004595 3.9e-67 258.5 183 71.6
HPP92_001384 Vanilla planifolia HOM05D004003 ORTHO05D004595 3.9e-67 258.5 170 74.7
Medtr6g053280 Medicago truncatula HOM05D004003 ORTHO05D004595 1.2e-65 253.4 181 69.6
C02p19300 Brassica napus HOM05D004003 ORTHO05D004595 5.2e-64 248.1 176 72.2
BolC2t08066H Brassica oleracea HOM05D004003 ORTHO05D004595 5.2e-64 248.1 176 72.2
Zm00001eb015010 Zea mays HOM05D004003 ORTHO05D004595 2.9e-62 242.3 159 73.0
Os03g0313000 Oryza sativa ssp. japonica HOM05D004003 ORTHO05D004595 1.1e-61 240.4 159 72.3
CDE05G0545 Ceratophyllum demersum HOM05D004003 ORTHO05D004595 1.4e-61 240.0 154 76.0
CDE05G3305 Ceratophyllum demersum HOM05D004003 ORTHO05D004595 5.4e-61 238.0 154 74.7
AUR62042233 Chenopodium quinoa HOM05D004003 ORTHO05D004595 7.8e-60 234.2 176 70.5
ATR0721G154 Amborella trichopoda HOM05D004003 ORTHO05D004595 1.7e-59 233.0 160 68.8
PSO478G1314 Papaver somniferum HOM05D004003 ORTHO05D004595 1.7e-59 233.0 152 74.3
Haze_00063 Corylus avellana HOM05D004003 ORTHO05D004595 4.0e-56 221.9 133 79.7
TAR636G0624 Trochodendron aralioides HOM05D004003 ORTHO05D004595 2.6e-55 219.2 132 80.3
MD00G1172600 Malus domestica HOM05D004003 ORTHO05D004595 3.0e-51 205.7 132 75.0
SEGI_14933 Sequoiadendron giganteum HOM05D004003 ORTHO05D004595 3.0e-51 205.7 174 58.0
BolC9t57124H Brassica oleracea HOM05D004003 ORTHO05D004595 1.1e-50 203.8 151 66.9
vmacro09809 Vaccinium macrocarpon HOM05D004003 ORTHO05D004595 2.1e-49 199.5 153 66.0
HanXRQChr10g0304961 Helianthus annuus HOM05D004003 ORTHO05D004595 2.2e-46 189.5 108 90.7
MD13G1261600 Malus domestica HOM05D004003 ORTHO05D004595 6.4e-46 188.0 111 77.5
Pp3c5_12290 Physcomitrium patens HOM05D004003 ORTHO05D004595 1.0e-43 180.6 136 64.0
AagrBONN_evm.TU.Sc2ySwM_344.4010 Anthoceros agrestis HOM05D004003 ORTHO05D004595 2.3e-43 179.5 136 64.0
Ah.10g032500 Amaranthus hybridus HOM05D004003 ORTHO05D004595 3.9e-43 178.7 180 57.8
Mapoly0111s0029 Marchantia polymorpha HOM05D004003 ORTHO05D004595 2.8e-41 172.6 136 60.3
CBR_g31069 Chara braunii HOM05D004003 ORTHO05D004595 4.8e-41 171.8 135 59.3
Zm00001eb395850 Zea mays HOM05D004003 ORTHO05D004595 7.9e-36 154.5 112 70.5
Thhalv10015894m.g Eutrema salsugineum HOM05D004003 ORTHO05D004595 3.3e-34 149.1 176 53.4
SMO119G0129 Selaginella moellendorffii HOM05D004003 ORTHO05D004595 3.6e-33 145.6 120 55.8
BcaC03g14495 Brassica carinata HOM05D004003 ORTHO05D004595 1.4e-32 143.7 90 82.2
RcHm_v2.0_Chr1g0362161 Rosa chinensis HOM05D004003 ORTHO05D004595 2.6e-31 139.4 88 81.8
CAN.G311.32 Capsicum annuum HOM05D005247 ORTHO05D006571 4.5e-31 138.7 105 72.4
Ah.03g141030 Amaranthus hybridus HOM05D004003 ORTHO05D004595 1.8e-27 126.7 99 62.6
Psat6g098040 Pisum sativum HOM05D000395 ORTHO05D004595 5.6e-26 121.7 96 65.6
ECA238G0868 Erigeron canadensis HOM05D004003 ORTHO05D004595 3.7e-25 119.0 174 39.1
ECA240G4047 Erigeron canadensis HOM05D004003 ORTHO05D004595 8.1e-25 117.9 126 43.7
CAN.G204.11 Capsicum annuum HOM05D004003 ORTHO05D004595 2.4e-24 116.3 56 91.1
ECA240G1980 Erigeron canadensis HOM05D004003 ORTHO05D004595 3.1e-24 115.9 131 44.3
ECA240G4361 Erigeron canadensis HOM05D004003 ORTHO05D004595 3.1e-24 115.9 131 44.3
Dinv24022 Davidia involucrata HOM05D004003 ORTHO05D004595 1.7e-22 110.2 71 74.6
AT4G28005 Arabidopsis thaliana HOM05D004003 ORTHO05D004595 2.7e-20 102.8 176 40.9
COL.COLO4_06858 Corchorus olitorius HOM05D004003 ORTHO05D004595 2.7e-20 102.8 69 66.7
CAN.G640.19 Capsicum annuum HOM05D004003 ORTHO05D004595 3.0e-19 99.4 73 69.9
BcaC03g14494 Brassica carinata HOM05D004003 ORTHO05D004595 1.5e-18 97.1 72 63.9
MCO01G593 Micromonas commoda HOM05D004003 ORTHO05D004595 8.2e-17 91.3 100 43.0
MCO01G594 Micromonas commoda HOM05D004003 ORTHO05D004595 8.2e-17 91.3 100 43.0
Rhsim03G0124900 Rhododendron simsii HOM05D004003 ORTHO05D004595 4.1e-16 89.0 52 82.7
Haze_26197 Corylus avellana HOM05D004003 ORTHO05D004595 1.3e-14 84.0 101 42.6
ATR0721G175 Amborella trichopoda HOM05D004003 ORTHO05D004595 6.1e-12 75.1 61 50.8
Cre13.g568800 Chlamydomonas reinhardtii HOM05D004003 ORTHO05D004595 3.9e-11 72.4 95 43.2
PRCOL_00006691 Prasinoderma coloniale HOM05D004003 ORTHO05D004595 6.5e-06 55.1 97 37.1


User provided reference genes

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