Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu061639.1 Olea europaea HOM05D003170 ORTHO05D003611 7.9e-68 260.4 137 100.0
Oeu021775.1 Olea europaea HOM05D003170 ORTHO05D003611 1.4e-56 223.0 135 88.9
MSTRG.8749 Avicennia marina HOM05D003170 ORTHO05D003611 1.7e-33 146.4 142 62.7
Nitab4.5_0000716g0230 Nicotiana tabacum HOM05D003170 ORTHO05D003611 4.5e-31 138.3 134 65.7
Lj4A278T48 Lonicera japonica HOM05D003170 ORTHO05D003611 2.2e-30 136.0 134 63.4
Lj4A278T49 Lonicera japonica HOM05D003170 ORTHO05D003611 2.2e-30 136.0 134 64.9
CSS0039374 Camellia sinensis var. sinensis HOM05D003170 ORTHO05D003611 2.9e-30 135.6 148 61.5
CAN.G1704.1 Capsicum annuum HOM05D003170 ORTHO05D003611 3.8e-30 135.2 136 63.2
Migut.F00355 Erythranthe guttata HOM05D003170 ORTHO05D003611 1.1e-29 133.7 138 61.6
CSS0015678 Camellia sinensis var. sinensis HOM05D003170 ORTHO05D003611 2.5e-29 132.5 149 61.7
Nitab4.5_0001508g0020 Nicotiana tabacum HOM05D003170 ORTHO05D003611 2.5e-29 132.5 131 64.1
Prupe.2G292500 Prunus persica HOM05D003170 ORTHO05D003611 2.5e-29 132.5 148 60.8
Thecc.03G174600 Theobroma cacao HOM05D003170 ORTHO05D003611 3.2e-29 132.1 147 60.5
TAR374G0603 Trochodendron aralioides HOM05D003170 ORTHO05D003611 4.2e-29 131.7 141 59.6
Manes.14G027300 Manihot esculenta HOM05D003170 ORTHO05D003611 5.5e-29 131.3 150 58.7
PGSC0003DMG400014326 Solanum tuberosum HOM05D003170 ORTHO05D003611 9.4e-29 130.6 135 60.7
Haze_13733 Corylus avellana HOM05D003170 ORTHO05D003611 2.1e-28 129.4 153 57.5
Solyc03g025980.3 Solanum lycopersicum HOM05D003170 ORTHO05D003611 4.7e-28 128.3 131 58.8
CiPaw.03G104800 Carya illinoinensis HOM05D003170 ORTHO05D003611 8.0e-28 127.5 153 55.6
CiPaw.04G065700 Carya illinoinensis HOM05D003170 ORTHO05D003611 8.0e-28 127.5 154 53.9
Dinv35200 Davidia involucrata HOM05D003170 ORTHO05D003611 8.0e-28 127.5 150 60.0
TWI39G0473 Tripterygium wilfordii HOM05D003170 ORTHO05D003611 8.0e-28 127.5 138 60.1
Sopen03g004800 Solanum pennellii HOM05D003170 ORTHO05D003611 1.8e-27 126.3 131 58.0
Hma1.2p1_2094F.1_g313950 Hydrangea macrophylla HOM05D003170 ORTHO05D003611 1.5e-26 123.2 145 58.6
Aqoxy7G00394 Aquilegia oxysepala HOM05D003170 ORTHO05D003611 2.0e-26 122.9 144 54.2
Hund04727 Selenicereus undatus HOM05D003170 ORTHO05D003611 3.3e-26 122.1 148 56.1
TWI23G0489 Tripterygium wilfordii HOM05D003170 ORTHO05D003611 3.3e-26 122.1 138 58.7
MSTRG.8449 Avicennia marina HOM05D003170 ORTHO05D003611 9.7e-26 120.6 148 56.8
CSS0022669 Camellia sinensis var. sinensis HOM05D003170 ORTHO05D003611 1.3e-25 120.2 131 61.8
Actinidia32873 Actinidia chinensis HOM05D003170 ORTHO05D003611 3.7e-25 118.6 136 59.6
CSS0042797 Camellia sinensis var. sinensis HOM05D003170 ORTHO05D003611 3.7e-25 118.6 131 61.1
TWI14G0563 Tripterygium wilfordii HOM05D003170 ORTHO05D003611 4.8e-25 118.2 132 60.6
TAR629G1853 Trochodendron aralioides HOM05D003170 ORTHO05D003611 4.8e-25 118.2 135 58.5
AUR62021211 Chenopodium quinoa HOM05D003170 ORTHO05D003611 1.1e-24 117.1 137 56.2
Nitab4.5_0014916g0010 Nicotiana tabacum HOM05D003170 ORTHO05D003611 1.1e-24 117.1 138 53.6
PGR042G1969 Punica granatum HOM05D003170 ORTHO05D003611 1.8e-24 116.3 149 55.7
Dinv28458 Davidia involucrata HOM05D003170 ORTHO05D003611 2.4e-24 115.9 143 55.2
EL10Ac3g05670 Beta vulgaris HOM05D003170 ORTHO05D003611 3.1e-24 115.5 136 55.1
SGA_v2.0_scaffold10G05362 Striga asiatica HOM05D003170 ORTHO05D003611 3.1e-24 115.5 147 52.4
PSO782G4582 Papaver somniferum HOM05D003170 ORTHO05D003611 4.1e-24 115.2 136 51.5
Peaxi162Scf00915g00018 Petunia axillaris HOM05D006363 ORTHO05D007920 4.1e-24 115.2 111 63.1
Duzib205G1559 Durio zibethinus HOM05D003170 ORTHO05D003611 7.0e-24 114.4 145 55.2
Ah.08g214090 Amaranthus hybridus HOM05D003170 ORTHO05D003611 9.1e-24 114.0 137 54.0
Duzib084G1425 Durio zibethinus HOM05D003170 ORTHO05D003611 9.1e-24 114.0 145 56.6
QL09p014578 Quercus lobata HOM05D003170 ORTHO05D003611 9.1e-24 114.0 135 54.1
SalBow2G0654 Salvia bowleyana HOM05D003170 ORTHO05D003611 2.6e-23 112.5 140 54.3
MD07G1266900 Malus domestica HOM05D003170 ORTHO05D003611 3.5e-23 112.1 133 56.4
Cc02_g03170 Coffea canephora HOM05D003170 ORTHO05D003611 5.9e-23 111.3 133 60.2
DCAR_018189 Daucus carota HOM05D003170 ORTHO05D003611 5.9e-23 111.3 104 63.5
Cpa.g.sc107.34 Carica papaya HOM05D003170 ORTHO05D003611 7.7e-23 110.9 133 53.4
Rhsim03G0179100 Rhododendron simsii HOM05D003170 ORTHO05D003611 1.3e-22 110.2 147 52.4
Nn6g34195 Nelumbo nucifera HOM05D003170 ORTHO05D003611 2.2e-22 109.4 131 55.7
Potri.015G140500 Populus trichocarpa HOM05D003170 ORTHO05D003611 2.9e-22 109.0 146 55.5
MELO3C005380.2 Cucumis melo HOM05D003170 ORTHO05D003611 3.8e-22 108.6 145 52.4
Duzib068G0533 Durio zibethinus HOM05D003170 ORTHO05D003611 3.8e-22 108.6 148 53.4
Nitab4.5_0001600g0020 Nicotiana tabacum HOM05D003170 ORTHO05D003611 3.8e-22 108.6 132 53.8
Lj2g0008178 Lotus japonicus HOM05D003170 ORTHO05D003611 5.0e-22 108.2 148 53.4
Phvul.004G118600 Phaseolus vulgaris HOM05D003170 ORTHO05D003611 6.5e-22 107.8 149 51.7
ClCG01G005500 Citrullus lanatus HOM05D003170 ORTHO05D008719 8.5e-22 107.5 148 52.0
Hund11760 Selenicereus undatus HOM05D003170 ORTHO05D003611 1.1e-21 107.1 143 51.7
Sabra15G0151100 Salix brachista HOM05D003170 ORTHO05D003611 1.9e-21 106.3 133 57.9
Hund28786 Selenicereus undatus HOM05D003170 ORTHO05D003611 1.9e-21 106.3 130 54.6
VMungo0464G1052 Vigna mungo HOM05D003170 ORTHO05D003611 5.5e-21 104.8 147 51.7
Ciclev10006977m.g Citrus clementina HOM05D003170 ORTHO05D003611 1.6e-20 103.2 152 52.0
Hma1.2p1_0270F.1_g108200 Hydrangea macrophylla HOM05D003170 ORTHO05D003611 2.1e-20 102.8 134 54.5
Lalb_Chr19g0130961 Lupinus albus HOM05D003170 ORTHO05D003611 2.7e-20 102.4 150 48.0
Peaxi162Scf00132g01511 Petunia axillaris HOM05D003170 ORTHO05D003611 2.7e-20 102.4 136 51.5
Ca_06615_v3 Cicer arietinum L. HOM05D003170 ORTHO05D003611 3.6e-20 102.1 148 51.4
GSVIVG01010550001 Vitis vinifera HOM05D003170 ORTHO05D003611 3.6e-20 102.1 125 55.2
CAN.G166.6 Capsicum annuum HOM05D003170 ORTHO05D003611 4.7e-20 101.7 134 52.2
CsaV3_5G005730 Cucumis sativus L. HOM05D003170 ORTHO05D003611 4.7e-20 101.7 120 55.8
Glyma.16G195400 Glycine max HOM05D003170 ORTHO05D003611 6.1e-20 101.3 147 50.3
MD01G1199100 Malus domestica HOM05D003170 ORTHO05D003611 6.1e-20 101.3 154 49.4
Potri.012G138600 Populus trichocarpa HOM05D003170 ORTHO05D003611 6.1e-20 101.3 146 52.7
Sabra12G0104000 Salix brachista HOM05D003170 ORTHO05D003611 6.1e-20 101.3 145 53.8
Psat0ss2830g0120 Pisum sativum HOM05D003170 ORTHO05D003611 8.0e-20 100.9 149 50.3
Eucgr.K00241 Eucalyptus grandis HOM05D003170 ORTHO05D003611 1.0e-19 100.5 137 51.8
Glyma.09G142100 Glycine max HOM05D003170 ORTHO05D003611 1.8e-19 99.8 144 50.0
PGR142G3131 Punica granatum HOM05D003170 ORTHO05D003611 2.3e-19 99.4 138 54.3
Gorai.004G119500 Gossypium raimondii HOM05D003170 ORTHO05D003611 5.2e-19 98.2 130 58.5
vmacro06699 Vaccinium macrocarpon HOM05D003170 ORTHO05D003611 5.2e-19 98.2 142 48.6
Gohir.D08G111500 Gossypium hirsutum HOM05D003170 ORTHO05D003611 6.8e-19 97.8 130 58.5
arahy.Tifrunner.gnm1.ann1.UE8RN5 Arachis hypogaea HOM05D003170 ORTHO05D003611 1.2e-18 97.1 140 48.6
AUR62016003 Chenopodium quinoa HOM05D003170 ORTHO05D003611 1.2e-18 97.1 137 50.4
Gorai.006G047800 Gossypium raimondii HOM05D003170 ORTHO05D003611 1.2e-18 97.1 146 48.6
Sc25g0000430 Simmondsia chinensis HOM05D003170 ORTHO05D003611 1.2e-18 97.1 138 51.4
DCAR_020240 Daucus carota HOM05D003170 ORTHO05D003611 2.6e-18 95.9 133 51.1
Sed0024024 Sechium edule HOM05D003170 ORTHO05D003611 2.6e-18 95.9 135 53.3
Gohir.A08G100333 Gossypium hirsutum HOM05D003170 ORTHO05D003611 3.4e-18 95.5 130 56.9
PSO478G4201 Papaver somniferum HOM05D003170 ORTHO05D003611 4.4e-18 95.1 171 40.4
ATR0757G045 Amborella trichopoda HOM05D003170 ORTHO05D003611 5.7e-18 94.7 135 51.9
Gohir.D09G041500 Gossypium hirsutum HOM05D003170 ORTHO05D003611 5.7e-18 94.7 146 47.9
HPP92_016063 Vanilla planifolia HOM05D003170 ORTHO05D003611 9.7e-18 94.0 138 50.0
Atru.chr1.481 Acer truncatum HOM05D003170 ORTHO05D003611 1.3e-17 93.6 149 49.7
Medtr0022s0300 Medicago truncatula HOM05D003170 ORTHO05D003611 1.3e-17 93.6 149 48.3
unitig_0.g2485 Utricularia gibba HOM05D003170 ORTHO05D003611 2.2e-17 92.8 139 51.8
CANSAT21G1030 Cannabis sativa HOM05D003170 ORTHO05D003611 3.7e-17 92.0 114 56.1
Lalb_Chr01g0009211 Lupinus albus HOM05D003170 ORTHO05D003611 6.3e-17 91.3 151 46.4
COL.COLO4_14288 Corchorus olitorius HOM05D006363 ORTHO05D007920 8.3e-17 90.9 129 47.3
Rhsim01G0180500 Rhododendron simsii HOM05D003170 ORTHO05D003611 1.4e-16 90.1 131 52.7
arahy.Tifrunner.gnm1.ann1.HMB1PX Arachis hypogaea HOM05D003170 ORTHO05D003611 3.1e-16 89.0 142 45.8
Nn1g01407 Nelumbo nucifera HOM05D003170 ORTHO05D003611 3.1e-16 89.0 120 50.0
PGSC0003DMG400010855 Solanum tuberosum HOM05D003170 ORTHO05D003611 3.1e-16 89.0 129 48.8
TPR.G10770 Trifolium pratense HOM05D003170 ORTHO05D003611 4.1e-16 88.6 148 46.6
Migut.F01132 Erythranthe guttata HOM05D003170 ORTHO05D003611 5.3e-16 88.2 133 45.1
Sp7g23560 Schrenkiella parvula HOM05D003170 ORTHO05D003611 5.3e-16 88.2 129 47.3
THA.LOC104800259 Tarenaya hassleriana HOM05D003170 ORTHO05D003611 5.3e-16 88.2 103 53.4
Carub.0007s1545 Capsella rubella HOM05D003170 ORTHO05D003611 7.0e-16 87.8 141 46.1
Os05g0301600 Oryza sativa ssp. japonica HOM05D003170 ORTHO05D003611 1.2e-15 87.0 134 44.0
Gohir.A09G040930 Gossypium hirsutum HOM05D003170 ORTHO05D003611 2.0e-15 86.3 153 45.1
CiPaw.16G095000 Carya illinoinensis HOM05D003170 ORTHO05D003611 3.5e-15 85.5 96 58.3
Actinidia31814 Actinidia chinensis HOM05D003170 ORTHO05D003611 5.9e-15 84.7 104 57.7
Lsat_1_v5_gn_5_1720 Lactuca sativa HOM05D003170 ORTHO05D003611 5.9e-15 84.7 134 48.5
Solyc01g009610.3 Solanum lycopersicum HOM05D003170 ORTHO05D003611 7.7e-15 84.3 129 48.8
MBI04_g04732_MAGBIO Magnolia biondii HOM05D003170 ORTHO05D003611 1.0e-14 84.0 135 47.4
CARHR232950 Cardamine hirsuta HOM05D003170 ORTHO05D003611 1.3e-14 83.6 137 46.0
Lsat_1_v5_gn_0_29780 Lactuca sativa HOM05D003170 ORTHO05D003611 1.3e-14 83.6 145 46.9
Haze_08928 Corylus avellana HOM05D003170 ORTHO05D003611 1.7e-14 83.2 130 44.6
Gohir.D09G175400 Gossypium hirsutum HOM05D003170 ORTHO05D003611 2.2e-14 82.8 131 51.1
Gorai.006G197500 Gossypium raimondii HOM05D003170 ORTHO05D003611 2.2e-14 82.8 131 51.1
Lsat_1_v5_gn_2_10280 Lactuca sativa HOM05D003170 ORTHO05D003611 2.2e-14 82.8 133 48.1
Sed0003103 Sechium edule HOM05D003170 ORTHO05D003611 2.9e-14 82.4 133 46.6
TAR375G0255 Trochodendron aralioides HOM05D003170 ORTHO05D003611 3.8e-14 82.0 137 45.3
vmacro09842 Vaccinium macrocarpon HOM05D003170 ORTHO05D003611 3.8e-14 82.0 129 49.6
Sp6g14450 Schrenkiella parvula HOM05D003170 ORTHO05D003611 6.5e-14 81.3 138 44.9
ECA233G1278 Erigeron canadensis HOM05D003170 ORTHO05D003611 8.5e-14 80.9 134 46.3
HanXRQChr14g0462211 Helianthus annuus HOM05D003170 ORTHO05D003611 8.5e-14 80.9 131 45.8
Aa31LG3G8580 Aethionema arabicum HOM05D003170 ORTHO05D003611 1.2e-12 77.0 121 45.5
Thhalv10014782m.g Eutrema salsugineum HOM05D003170 ORTHO05D003611 1.2e-12 77.0 132 43.2
Actinidia03117 Actinidia chinensis HOM05D003170 ORTHO05D003611 1.6e-12 76.6 143 47.6
A10p09900 Brassica napus HOM05D003170 ORTHO05D003611 2.7e-12 75.9 136 41.2
Duzib205G0251 Durio zibethinus HOM05D003170 ORTHO05D003611 3.6e-12 75.5 135 40.7
Lsat_1_v5_gn_8_66160 Lactuca sativa HOM05D003170 ORTHO05D003611 6.1e-12 74.7 111 45.9
Zm00001eb304110 Zea mays HOM05D003170 ORTHO05D003611 8.0e-12 74.3 117 47.9
Ciclev10022533m.g Citrus clementina HOM05D003170 ORTHO05D003611 1.0e-11 73.9 130 43.1
QL12p017686 Quercus lobata HOM05D003170 ORTHO05D003611 1.2e-10 70.5 129 40.3
FAN03G0230 Fragaria x ananassa HOM05D003170 ORTHO05D003611 1.5e-10 70.1 105 51.4
FAN03G3472 Fragaria x ananassa HOM05D003170 ORTHO05D003611 1.5e-10 70.1 105 51.4
Lsat_1_v5_gn_8_6760 Lactuca sativa HOM05D003170 ORTHO05D003611 1.5e-10 70.1 106 48.1
arahy.Tifrunner.gnm1.ann1.XVLL42 Arachis hypogaea HOM05D003170 ORTHO05D003611 3.4e-10 68.9 123 45.5
HanXRQChr13g0395671 Helianthus annuus HOM05D003170 ORTHO05D003611 3.4e-10 68.9 133 41.4
CDE04G2040 Ceratophyllum demersum HOM05D003170 ORTHO05D003611 4.4e-10 68.6 139 43.9
FAN10G1156 Fragaria x ananassa HOM05D003170 ORTHO05D003611 4.4e-10 68.6 104 50.0
Lsat_1_v5_gn_0_10360 Lactuca sativa HOM05D003170 ORTHO05D003611 4.4e-10 68.6 108 50.0
FAN01G0494 Fragaria x ananassa HOM05D003170 ORTHO05D003611 5.7e-10 68.2 118 47.5
ECA238G0732 Erigeron canadensis HOM05D003170 ORTHO05D003611 7.5e-10 67.8 132 41.7
Thhalv10026333m.g Eutrema salsugineum HOM05D003170 ORTHO05D003611 7.5e-10 67.8 141 41.1
Lsat_1_v5_gn_2_66880 Lactuca sativa HOM05D003170 ORTHO05D003611 7.5e-10 67.8 97 50.5
FvH4_7g29250 Fragaria vesca HOM05D003170 ORTHO05D003611 9.8e-10 67.4 109 49.5
FAN06G4027 Fragaria x ananassa HOM05D003170 ORTHO05D003611 1.3e-09 67.0 102 51.0
FAN06G4666 Fragaria x ananassa HOM05D003170 ORTHO05D003611 1.3e-09 67.0 102 51.0
Sopen01g005140 Solanum pennellii HOM05D003170 ORTHO05D003611 1.7e-09 66.6 79 54.4
BcaB08g35572 Brassica carinata HOM05D003170 ORTHO05D003611 8.3e-09 64.3 103 45.6
Lsat_1_v5_gn_9_89540 Lactuca sativa HOM05D003170 ORTHO05D003611 8.3e-09 64.3 133 42.9
BcaC06g32804 Brassica carinata HOM05D001175 ORTHO05D003020 1.1e-08 63.9 107 45.8
Glyma.20G157200 Glycine max HOM05D003170 ORTHO05D003611 1.1e-08 63.9 125 40.8
Lsat_1_v5_gn_2_26501 Lactuca sativa HOM05D003170 ORTHO05D003611 1.4e-08 63.5 134 43.3
C07p54390 Brassica napus HOM05D001061 ORTHO05D006729 1.8e-08 63.2 108 45.4
BolC7t45924H Brassica oleracea HOM05D003170 ORTHO05D003611 1.8e-08 63.2 108 45.4
A03p56070 Brassica napus HOM05D001061 ORTHO05D006729 2.4e-08 62.8 108 45.4
Phvul.007G068200 Phaseolus vulgaris HOM05D003170 ORTHO05D003611 5.4e-08 61.6 131 35.9
Lsat_1_v5_gn_8_63220 Lactuca sativa HOM05D003170 ORTHO05D003611 7.0e-08 61.2 109 45.9
arahy.Tifrunner.gnm1.ann1.NN7C7R Arachis hypogaea HOM05D003170 ORTHO05D003611 9.1e-08 60.8 117 43.6
LjContig00238g0006434 Lotus japonicus HOM05D003170 ORTHO05D003611 9.1e-08 60.8 122 37.7
Aa31sc165G60 Aethionema arabicum HOM05D003170 ORTHO05D003611 2.0e-07 59.7 126 37.3
VMungo0720G1110 Vigna mungo HOM05D003170 ORTHO05D003611 2.7e-07 59.3 104 38.5
HPP92_017209 Vanilla planifolia HOM05D003170 ORTHO05D003611 3.5e-07 58.9 106 44.3
Glyma.10G237400 Glycine max HOM05D003170 ORTHO05D003611 1.3e-06 57.0 137 38.0
RcHm_v2.0_Chr1g0377001 Rosa chinensis HOM05D003170 ORTHO05D003611 3.8e-06 55.5 121 43.8
AT5G52200 Arabidopsis thaliana HOM05D003170 ORTHO05D003611 6.6e-06 54.7 107 40.2
Medtr1g100747 Medicago truncatula HOM05D003170 ORTHO05D003611 6.6e-06 54.7 129 38.8
TPR.G14320 Trifolium pratense HOM05D003170 ORTHO05D003611 6.6e-06 54.7 122 36.1
Carub.0008s1229 Capsella rubella HOM05D003170 ORTHO05D003611 8.6e-06 54.3 101 41.6
CBR_g17955 Chara braunii HOM05D003170 ORTHO05D003611 8.6e-06 54.3 113 41.6


User provided reference genes

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