Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu061605.1 Olea europaea HOM05D004806 ORTHO05D005397 1.3e-79 299.7 147 100.0
Oeu021121.1 Olea europaea HOM05D004806 ORTHO05D005397 8.9e-09 64.3 44 68.2
FAN01G2868 Fragaria x ananassa HOM05D004806 ORTHO05D005397 1.2e-08 63.9 90 43.3
Potri.010G192800 Populus trichocarpa HOM05D004806 ORTHO05D005397 1.5e-08 63.5 55 52.7
Sabra08G0047400 Salix brachista HOM05D004806 ORTHO05D005397 1.5e-08 63.5 55 52.7
Migut.F01427 Erythranthe guttata HOM05D004806 ORTHO05D005397 2.0e-08 63.2 55 54.5
FAN10G3438 Fragaria x ananassa HOM05D004806 ORTHO05D005397 2.6e-08 62.8 55 49.1
MD01G1147200 Malus domestica HOM05D004806 ORTHO05D005397 2.6e-08 62.8 55 50.9
Prupe.2G246100 Prunus persica HOM05D004806 ORTHO05D005397 2.6e-08 62.8 55 50.9
MELO3C008275.2 Cucumis melo HOM05D004806 ORTHO05D005397 3.4e-08 62.4 53 52.8
Oeu059753.1 Olea europaea HOM05D004806 ORTHO05D005397 3.4e-08 62.4 42 66.7
Potri.008G064500 Populus trichocarpa HOM05D004806 ORTHO05D005397 3.4e-08 62.4 55 50.9
PGR142G0174 Punica granatum HOM05D004806 ORTHO05D005397 3.4e-08 62.4 55 52.7
Thecc.10G026200 Theobroma cacao HOM05D004806 ORTHO05D005397 3.4e-08 62.4 55 50.9
arahy.Tifrunner.gnm1.ann1.13YYB8 Arachis hypogaea HOM05D004806 ORTHO05D005397 4.4e-08 62.0 55 49.1
arahy.Tifrunner.gnm1.ann1.76KK00 Arachis hypogaea HOM05D004806 ORTHO05D005397 4.4e-08 62.0 55 49.1
DCAR_027553 Daucus carota HOM05D004806 ORTHO05D005397 4.4e-08 62.0 55 52.7
Medtr5g081880 Medicago truncatula HOM05D004806 ORTHO05D005397 4.4e-08 62.0 53 54.7
SalBow6G1361 Salvia bowleyana HOM05D004806 ORTHO05D005397 5.8e-08 61.6 46 63.0
SalBow6G1823 Salvia bowleyana HOM05D004806 ORTHO05D005397 5.8e-08 61.6 46 63.0
Oeu055830.1 Olea europaea HOM05D004806 ORTHO05D005397 7.5e-08 61.2 55 52.7
CSS0019944 Camellia sinensis var. sinensis HOM05D004806 ORTHO05D005397 9.8e-08 60.8 55 50.9
Dinv20955 Davidia involucrata HOM05D004806 ORTHO05D005397 9.8e-08 60.8 55 50.9
Dinv20988 Davidia involucrata HOM05D004806 ORTHO05D005397 9.8e-08 60.8 55 50.9
FAN03G1683 Fragaria x ananassa HOM05D004806 ORTHO05D005397 9.8e-08 60.8 55 49.1
Lsat_1_v5_gn_8_12421 Lactuca sativa HOM05D004806 ORTHO05D005397 9.8e-08 60.8 55 52.7
Manes.10G017800 Manihot esculenta HOM05D004806 ORTHO05D005397 9.8e-08 60.8 55 49.1
Psat2g035600 Pisum sativum HOM05D004806 ORTHO05D005397 9.8e-08 60.8 53 50.9
TPR.G8038 Trifolium pratense HOM05D004806 ORTHO05D005397 9.8e-08 60.8 53 52.8
Eucgr.G03032 Eucalyptus grandis HOM05D004806 ORTHO05D005397 1.3e-07 60.5 55 49.1
MD07G1214200 Malus domestica HOM05D004806 ORTHO05D005397 1.3e-07 60.5 42 61.9
vmacro06995 Vaccinium macrocarpon HOM05D004806 ORTHO05D005397 1.3e-07 60.5 55 50.9
HPP92_018194 Vanilla planifolia HOM05D004806 ORTHO05D005397 1.3e-07 60.5 53 49.1
TWI53G0900 Tripterygium wilfordii HOM05D004806 ORTHO05D005397 1.7e-07 60.1 53 54.7
Atru.chr12.242 Acer truncatum HOM05D004806 ORTHO05D005397 2.2e-07 59.7 55 49.1
Actinidia29677 Actinidia chinensis HOM05D004806 ORTHO05D005397 2.2e-07 59.7 55 49.1
Actinidia33944 Actinidia chinensis HOM05D004806 ORTHO05D005397 2.2e-07 59.7 55 49.1
CsaV3_6G001640 Cucumis sativus L. HOM05D004806 ORTHO05D005397 2.2e-07 59.7 50 54.0
FvH4_7g24020 Fragaria vesca HOM05D004806 ORTHO05D005397 2.2e-07 59.7 55 47.3
FAN06G0754 Fragaria x ananassa HOM05D004806 ORTHO05D005397 2.2e-07 59.7 55 47.3
RcHm_v2.0_Chr1g0369401 Rosa chinensis HOM05D004806 ORTHO05D005397 2.9e-07 59.3 55 47.3
Sabra10G0148400 Salix brachista HOM05D004806 ORTHO05D005397 2.9e-07 59.3 42 59.5
Sed0002029 Sechium edule HOM05D004806 ORTHO05D005397 2.9e-07 59.3 42 57.1
THA.LOC104824306 Tarenaya hassleriana HOM05D004806 ORTHO05D005397 2.9e-07 59.3 55 45.5
VMungo0647G1582 Vigna mungo HOM05D004806 ORTHO05D005397 2.9e-07 59.3 55 50.9
CDE02G2339 Ceratophyllum demersum HOM05D004806 ORTHO05D005397 4.9e-07 58.5 55 49.1
ClCG11G006350 Citrullus lanatus HOM05D004806 ORTHO05D005397 4.9e-07 58.5 50 52.0
Ciclev10030877m.g Citrus clementina HOM05D004806 ORTHO05D005397 4.9e-07 58.5 55 47.3
MBI14_g36885_MAGBIO Magnolia biondii HOM05D004806 ORTHO05D005397 4.9e-07 58.5 55 49.1
RcHm_v2.0_Chr1g0313541 Rosa chinensis HOM05D004806 ORTHO05D005397 6.4e-07 58.2 41 61.0
Ah.10g036410 Amaranthus hybridus HOM05D004806 ORTHO05D005397 8.3e-07 57.8 55 45.5
LjContig00357g0026481 Lotus japonicus HOM05D004806 ORTHO05D005397 8.3e-07 57.8 55 47.3
Peaxi162Scf00401g00118 Petunia axillaris HOM05D004806 ORTHO05D005397 8.3e-07 57.8 55 47.3
QL08p062653 Quercus lobata HOM05D004806 ORTHO05D005397 8.3e-07 57.8 63 46.0
Aqoxy2G00978 Aquilegia oxysepala HOM05D004806 ORTHO05D005397 1.1e-06 57.4 53 49.1
CiPaw.01G295700 Carya illinoinensis HOM05D004806 ORTHO05D005397 1.1e-06 57.4 55 47.3
Duzib114G0963 Durio zibethinus HOM05D004806 ORTHO05D005397 1.1e-06 57.4 55 49.1
Glyma.14G062000 Glycine max HOM05D004806 ORTHO05D005397 1.1e-06 57.4 55 47.3
Phvul.008G226400 Phaseolus vulgaris HOM05D004806 ORTHO05D005397 1.1e-06 57.4 55 49.1
SGA_v2.0_scaffold343G49443 Striga asiatica HOM05D004806 ORTHO05D005397 1.1e-06 57.4 55 47.3
Ca_05931_v3 Cicer arietinum L. HOM05D004806 ORTHO05D005397 1.4e-06 57.0 53 50.9
HanXRQChr14g0459971 Helianthus annuus HOM05D004806 ORTHO05D005397 1.4e-06 57.0 55 47.3
Lalb_Chr04g0250791 Lupinus albus HOM05D004806 ORTHO05D005397 1.4e-06 57.0 78 39.7
Nitab4.5_0000737g0020 Nicotiana tabacum HOM05D004806 ORTHO05D005397 1.4e-06 57.0 55 45.5
Sp4g22260 Schrenkiella parvula HOM05D004806 ORTHO05D005397 1.4e-06 57.0 55 43.6
AUR62012206 Chenopodium quinoa HOM05D004806 ORTHO05D005397 1.9e-06 56.6 55 47.3
AUR62022839 Chenopodium quinoa HOM05D004806 ORTHO05D005397 1.9e-06 56.6 55 47.3
Dinv34423 Davidia involucrata HOM05D004806 ORTHO05D005397 1.9e-06 56.6 55 47.3
Gohir.A06G164600 Gossypium hirsutum HOM05D004806 ORTHO05D005397 1.9e-06 56.6 55 45.5
Gohir.A10G229600 Gossypium hirsutum HOM05D004806 ORTHO05D005397 1.9e-06 56.6 55 49.1
Gohir.D06G170100 Gossypium hirsutum HOM05D004806 ORTHO05D005397 1.9e-06 56.6 55 45.5
Gohir.D10G243800 Gossypium hirsutum HOM05D004806 ORTHO05D005397 1.9e-06 56.6 55 49.1
Gorai.011G280200 Gossypium raimondii HOM05D004806 ORTHO05D005397 1.9e-06 56.6 55 49.1
Gorai.010G199100 Gossypium raimondii HOM05D004806 ORTHO05D005397 2.4e-06 56.2 55 45.5
C04p07550 Brassica napus HOM05D004806 ORTHO05D005397 3.2e-06 55.8 55 43.6
BolC4t22372H Brassica oleracea HOM05D004806 ORTHO05D005397 3.2e-06 55.8 55 43.6
BraA05t19615Z Brassica rapa HOM05D004806 ORTHO05D005397 3.2e-06 55.8 55 43.6
Duzib106G0751 Durio zibethinus HOM05D004806 ORTHO05D005397 3.2e-06 55.8 55 47.3
Lj1C950G18 Lonicera japonica HOM05D004806 ORTHO05D005397 3.2e-06 55.8 104 32.7
Nn2g11386 Nelumbo nucifera HOM05D004806 ORTHO05D005397 3.2e-06 55.8 55 47.3
EL10Ac2g04786 Beta vulgaris HOM05D004806 ORTHO05D005397 4.1e-06 55.5 43 58.1
CDE09G0712 Ceratophyllum demersum HOM05D004806 ORTHO05D005397 4.1e-06 55.5 42 59.5
Lsat_1_v5_gn_2_121900 Lactuca sativa HOM05D004806 ORTHO05D005397 4.1e-06 55.5 55 47.3
PGSC0003DMG400027178 Solanum tuberosum HOM05D004806 ORTHO05D005397 4.1e-06 55.5 55 45.5
TAR369G0441 Trochodendron aralioides HOM05D004806 ORTHO05D005397 4.1e-06 55.5 53 49.1
Aa31LG5G19660 Aethionema arabicum HOM05D004806 ORTHO05D005397 5.4e-06 55.1 55 41.8
CiPaw.02G189800 Carya illinoinensis HOM05D004806 ORTHO05D005397 5.4e-06 55.1 55 45.5
Nitab4.5_0003720g0010 Nicotiana tabacum HOM05D004806 ORTHO05D005397 5.4e-06 55.1 42 54.8
AL4G37530 Arabidopsis lyrata HOM05D004806 ORTHO05D005397 7.0e-06 54.7 55 41.8
Cc02_g06920 Coffea canephora HOM05D004806 ORTHO05D005397 7.0e-06 54.7 55 45.5
Thhalv10017559m.g Eutrema salsugineum HOM05D004806 ORTHO05D005397 7.0e-06 54.7 55 41.8
Lalb_Chr17g0346611 Lupinus albus HOM05D004806 ORTHO05D005397 7.0e-06 54.7 42 57.1
A05p06470 Brassica napus HOM05D004806 ORTHO05D005397 9.2e-06 54.3 51 47.1
ECA238G2978 Erigeron canadensis HOM05D004806 ORTHO05D005397 9.2e-06 54.3 55 43.6
Solyc05g052630.4 Solanum lycopersicum HOM05D004806 ORTHO05D005397 9.2e-06 54.3 55 43.6
Sopen05g031160 Solanum pennellii HOM05D004806 ORTHO05D005397 9.2e-06 54.3 55 43.6


User provided reference genes

Program Settings