Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu061583.3 Olea europaea HOM05D001937 ORTHO05D007024 4.1e-159 564.7 290 100.0
Actinidia11252 Actinidia chinensis HOM05D001937 ORTHO05D007024 2.6e-89 332.8 391 50.6
GSVIVG01034203001 Vitis vinifera HOM05D001937 ORTHO05D007024 1.1e-84 317.4 300 59.0
SalBow1G8218 Salvia bowleyana HOM05D001937 ORTHO05D007024 1.5e-84 317.0 479 43.8
MSTRG.3701 Avicennia marina HOM05D001937 ORTHO05D007024 7.4e-84 314.7 480 43.5
CAN.G97.40 Capsicum annuum HOM05D001937 ORTHO05D007024 1.3e-83 313.9 480 43.3
Manes.11G123000 Manihot esculenta HOM05D001937 ORTHO05D007024 2.2e-83 313.2 481 42.8
Migut.N00430 Erythranthe guttata HOM05D001937 ORTHO05D007024 4.8e-83 312.0 480 44.2
Dinv02213 Davidia involucrata HOM05D001937 ORTHO05D007024 6.3e-83 311.6 478 42.9
Lsat_1_v5_gn_6_11080 Lactuca sativa HOM05D001937 ORTHO05D007024 1.1e-82 310.8 477 43.2
Haze_10549 Corylus avellana HOM05D001937 ORTHO05D007024 1.4e-82 310.5 479 43.4
Lj1P823T23 Lonicera japonica HOM05D001937 ORTHO05D007024 1.4e-82 310.5 480 42.5
Sabra04G0061200 Salix brachista HOM05D001937 ORTHO05D007024 1.8e-82 310.1 478 43.3
Ciclev10018533m.g Citrus clementina HOM05D001937 ORTHO05D007024 2.4e-82 309.7 477 42.8
Cc09_g08410 Coffea canephora HOM05D001937 ORTHO05D007024 2.4e-82 309.7 480 43.1
FvH4_7g07120 Fragaria vesca HOM05D001937 ORTHO05D007024 2.4e-82 309.7 477 43.4
FAN06G4695 Fragaria x ananassa HOM05D001937 ORTHO05D007024 2.4e-82 309.7 477 43.4
FAN10G2279 Fragaria x ananassa HOM05D001937 ORTHO05D007024 2.4e-82 309.7 477 43.4
CSS0034620 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D007024 4.1e-82 308.9 480 43.3
DCAR_003140 Daucus carota HOM05D001937 ORTHO05D007024 4.1e-82 308.9 480 42.7
Solyc09g010560.3 Solanum lycopersicum HOM05D001937 ORTHO05D007024 5.3e-82 308.5 480 42.5
Sopen09g005280 Solanum pennellii HOM05D001937 ORTHO05D007024 5.3e-82 308.5 480 42.5
Duzib132G1189 Durio zibethinus HOM05D001937 ORTHO05D007024 7.0e-82 308.1 480 42.3
Hma1.2p1_0587F.1_g184190 Hydrangea macrophylla HOM05D001937 ORTHO05D007024 7.0e-82 308.1 480 42.5
CSS0040995 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D007024 9.1e-82 307.8 480 43.1
PGSC0003DMG400008847 Solanum tuberosum HOM05D001937 ORTHO05D007024 9.1e-82 307.8 480 42.3
THA.LOC104823845 Tarenaya hassleriana HOM05D001937 ORTHO05D007024 1.6e-81 307.0 480 42.1
Atru.chr12.1853 Acer truncatum HOM05D001937 ORTHO05D007024 2.0e-81 306.6 480 42.7
Ah.08g214380 Amaranthus hybridus HOM05D001937 ORTHO05D007024 2.0e-81 306.6 478 43.3
Nitab4.5_0000761g0030 Nicotiana tabacum HOM05D001937 ORTHO05D007024 2.0e-81 306.6 481 42.8
Cpa.g.sc41.77 Carica papaya HOM05D001937 ORTHO05D007024 2.6e-81 306.2 478 42.3
FAN03G1993 Fragaria x ananassa HOM05D001937 ORTHO05D007024 2.6e-81 306.2 477 42.8
RcHm_v2.0_Chr1g0337071 Rosa chinensis HOM05D001937 ORTHO05D007024 2.6e-81 306.2 477 43.6
Sc14g0006180 Simmondsia chinensis HOM05D001937 ORTHO05D007024 2.6e-81 306.2 479 42.8
Medtr4g093870 Medicago truncatula HOM05D001937 ORTHO05D007024 3.5e-81 305.8 481 43.7
TWI12G0886 Tripterygium wilfordii HOM05D001937 ORTHO05D007024 4.5e-81 305.4 480 42.7
HanXRQChr10g0312981 Helianthus annuus HOM05D001937 ORTHO05D007024 5.9e-81 305.1 481 42.0
Psat7g100640 Pisum sativum HOM05D001937 ORTHO05D007024 5.9e-81 305.1 480 42.7
Prupe.2G098100 Prunus persica HOM05D001937 ORTHO05D007024 7.7e-81 304.7 477 43.0
Rhsim09G0056700 Rhododendron simsii HOM05D001937 ORTHO05D007024 7.7e-81 304.7 480 42.5
Potri.004G091000 Populus trichocarpa HOM05D001937 ORTHO05D007024 1.0e-80 304.3 478 42.5
Duzib248G1173 Durio zibethinus HOM05D001937 ORTHO05D007024 1.3e-80 303.9 480 42.1
EL10Ac7g17851 Beta vulgaris HOM05D001937 ORTHO05D007024 1.7e-80 303.5 478 42.9
Lalb_Chr05g0217681 Lupinus albus HOM05D001937 ORTHO05D007024 1.7e-80 303.5 481 43.0
QL11p024047 Quercus lobata HOM05D001937 ORTHO05D007024 2.2e-80 303.1 479 43.0
Cfa005699 Carpinus fangiana HOM05D001937 ORTHO05D007024 2.9e-80 302.8 479 43.0
CiPaw.10G131100 Carya illinoinensis HOM05D001937 ORTHO05D007024 3.8e-80 302.4 480 42.1
COL.COLO4_33143 Corchorus olitorius HOM05D001937 ORTHO05D007024 3.8e-80 302.4 480 42.3
ECA233G4596 Erigeron canadensis HOM05D001937 ORTHO05D007024 6.5e-80 301.6 481 41.6
Eucgr.I01066 Eucalyptus grandis HOM05D001937 ORTHO05D007024 8.5e-80 301.2 480 43.3
arahy.Tifrunner.gnm1.ann1.EYG9NG Arachis hypogaea HOM05D001937 ORTHO05D007024 1.1e-79 300.8 482 42.3
AUR62008924 Chenopodium quinoa HOM05D001937 ORTHO05D007024 1.1e-79 300.8 479 42.2
TPR.G2837 Trifolium pratense HOM05D001937 ORTHO05D007024 1.1e-79 300.8 481 42.4
SGA_v2.0_scaffold14G07136 Striga asiatica HOM05D001937 ORTHO05D007024 1.5e-79 300.4 481 42.0
Glyma.08G069400 Glycine max HOM05D001937 ORTHO05D007024 1.9e-79 300.1 481 42.0
AUR62001097 Chenopodium quinoa HOM05D001937 ORTHO05D007024 2.5e-79 299.7 479 42.4
unitig_0.g658 Utricularia gibba HOM05D001937 ORTHO05D007024 3.2e-79 299.3 476 42.9
Actinidia06125 Actinidia chinensis HOM05D001937 ORTHO05D007024 4.2e-79 298.9 479 41.3
PSO017G7212 Papaver somniferum HOM05D001937 ORTHO05D007024 4.2e-79 298.9 479 41.8
Thecc.02G153900 Theobroma cacao HOM05D001937 ORTHO05D007024 5.5e-79 298.5 480 41.9
Aqoxy2G01407 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 7.2e-79 298.1 478 41.8
Aqoxy2G01413 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 7.2e-79 298.1 478 41.8
Aqoxy4G02972 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 7.2e-79 298.1 478 41.8
Aa31LG9G17330 Aethionema arabicum HOM05D001937 ORTHO05D007024 1.6e-78 297.0 480 42.1
BraA07t29656Z Brassica rapa HOM05D001937 ORTHO05D007024 1.6e-78 297.0 476 41.8
Gohir.D02G190400 Gossypium hirsutum HOM05D001937 ORTHO05D007024 1.6e-78 297.0 480 41.7
Ca_18373_v3 Cicer arietinum L. HOM05D001937 ORTHO05D007024 2.1e-78 296.6 482 41.9
MELO3C021250.2 Cucumis melo HOM05D001937 ORTHO05D007024 2.1e-78 296.6 479 42.4
Gohir.A03G167300 Gossypium hirsutum HOM05D001937 ORTHO05D007024 2.1e-78 296.6 480 41.5
Gorai.005G213100 Gossypium raimondii HOM05D001937 ORTHO05D007024 2.1e-78 296.6 480 41.7
Nn2g12806 Nelumbo nucifera HOM05D001937 ORTHO05D007024 2.1e-78 296.6 483 41.2
A07p19500 Brassica napus HOM05D001937 ORTHO05D007024 2.7e-78 296.2 476 41.8
Sp7g04200 Schrenkiella parvula HOM05D001937 ORTHO05D007024 2.7e-78 296.2 476 41.6
BcaB02g08024 Brassica carinata HOM05D001937 ORTHO05D007024 3.6e-78 295.8 560 38.2
MBI05_g10862_MAGBIO Magnolia biondii HOM05D001937 ORTHO05D007024 3.6e-78 295.8 479 41.5
PSO478G1455 Papaver somniferum HOM05D001937 ORTHO05D007024 3.6e-78 295.8 479 42.0
Lj4g0006057 Lotus japonicus HOM05D001937 ORTHO05D007024 6.1e-78 295.0 481 41.8
CsaV3_6G000030 Cucumis sativus L. HOM05D001937 ORTHO05D007024 1.0e-77 294.3 479 42.2
Thhalv10027622m.g Eutrema salsugineum HOM05D001937 ORTHO05D007024 1.0e-77 294.3 478 41.2
C06p17940 Brassica napus HOM05D001937 ORTHO05D007024 1.4e-77 293.9 477 41.5
BolC6t36984H Brassica oleracea HOM05D001937 ORTHO05D007024 1.4e-77 293.9 477 41.5
CANSAT01G0692 Cannabis sativa HOM05D001937 ORTHO05D007024 2.3e-77 293.1 479 41.3
MD07G1077100 Malus domestica HOM05D001937 ORTHO05D007024 2.3e-77 293.1 478 42.3
Zm00001eb021240 Zea mays HOM05D001937 ORTHO05D007024 4.0e-77 292.4 475 41.3
CARHR214920 Cardamine hirsuta HOM05D001937 ORTHO05D007024 5.2e-77 292.0 475 41.3
VMungo0251G0821 Vigna mungo HOM05D001937 ORTHO05D007024 6.7e-77 291.6 480 41.5
arahy.Tifrunner.gnm1.ann1.TT5FZ7 Arachis hypogaea HOM05D001937 ORTHO05D007024 8.8e-77 291.2 482 40.5
Carub.0007s3301 Capsella rubella HOM05D001937 ORTHO05D007024 1.5e-76 290.4 476 41.8
CDE07G0097 Ceratophyllum demersum HOM05D001937 ORTHO05D007024 1.5e-76 290.4 457 42.0
Phvul.002G211700 Phaseolus vulgaris HOM05D001937 ORTHO05D007024 2.0e-76 290.0 479 40.7
AL7G46730 Arabidopsis lyrata HOM05D001937 ORTHO05D007024 4.4e-76 288.9 476 41.2
FAN01G0178 Fragaria x ananassa HOM05D001937 ORTHO05D007024 4.4e-76 288.9 477 41.9
AT5G37830 Arabidopsis thaliana HOM05D001937 ORTHO05D007024 5.7e-76 288.5 477 40.9
ClCG05G003000 Citrullus lanatus HOM05D001937 ORTHO05D007024 5.7e-76 288.5 480 41.7
Sed0024188 Sechium edule HOM05D001937 ORTHO05D007024 1.7e-75 287.0 476 42.0
PGR142G3997 Punica granatum HOM05D001937 ORTHO05D007024 2.8e-75 286.2 482 41.1
ATR0559G108 Amborella trichopoda HOM05D001937 ORTHO05D007024 1.4e-74 283.9 479 40.7
Os01g0966000 Oryza sativa ssp. japonica HOM05D001937 ORTHO05D007024 2.0e-73 280.0 478 41.0
ATR0559G369 Amborella trichopoda HOM05D001937 ORTHO05D007024 3.5e-73 279.3 479 39.5
Peaxi162Scf00165g01826 Petunia axillaris HOM05D001937 ORTHO05D007024 3.5e-73 279.3 294 54.8
SEGI_01532 Sequoiadendron giganteum HOM05D001937 ORTHO05D007024 4.2e-71 272.3 479 39.7
CDE04G1916 Ceratophyllum demersum HOM05D001937 ORTHO05D007024 5.5e-71 271.9 482 39.4
BcaC08g44352 Brassica carinata HOM05D001937 ORTHO05D007024 4.7e-70 268.9 294 53.4
SHI12658 Sapria himalayana HOM05D001937 ORTHO05D007024 1.3e-67 260.8 489 37.6
Lalb_Chr16g0382831 Lupinus albus HOM05D001937 ORTHO05D007024 9.1e-66 254.6 269 55.4
VMungo0251G0025 Vigna mungo HOM05D001937 ORTHO05D007024 1.6e-65 253.8 284 53.2
AagrBONN_evm.TU.Sc2ySwM_368.2008 Anthoceros agrestis HOM05D001937 ORTHO05D007024 5.9e-65 251.9 477 38.2
Mapoly0035s0055 Marchantia polymorpha HOM05D001937 ORTHO05D007024 6.5e-64 248.4 479 35.5
TAR636G1691 Trochodendron aralioides HOM05D001937 ORTHO05D007024 2.5e-63 246.5 409 40.8
SMO147G0274 Selaginella moellendorffii HOM05D001937 ORTHO05D007024 1.8e-58 230.3 478 35.1
Pp3c19_22940 Physcomitrium patens HOM05D001937 ORTHO05D007024 5.6e-55 218.8 294 44.9
CBR_g26054 Chara braunii HOM05D000019 ORTHO05D000002 1.5e-52 210.7 484 33.7
Dinv02208 Davidia involucrata HOM05D001937 ORTHO05D007024 3.2e-50 203.0 239 51.5
Oeu029564.1 Olea europaea HOM05D001937 ORTHO05D007024 3.6e-38 162.9 119 73.1
Nitab4.5_0004091g0060 Nicotiana tabacum HOM05D001937 ORTHO05D007024 1.5e-36 157.5 323 38.7
MCO14G182 Micromonas commoda HOM05D001937 ORTHO05D007024 1.1e-34 151.4 267 37.8
Cfa025426 Carpinus fangiana HOM05D001937 ORTHO05D007024 1.4e-34 151.0 448 29.7
TAR636G1243 Trochodendron aralioides HOM05D001937 ORTHO05D007024 6.0e-33 145.6 277 37.9
Cre07.g325748 Chlamydomonas reinhardtii HOM05D001937 ORTHO05D007024 2.5e-31 140.2 239 40.2
HPP92_019823 Vanilla planifolia HOM05D001937 ORTHO05D007024 2.0e-28 130.6 103 66.0
ECA234G0635 Erigeron canadensis HOM05D001937 ORTHO05D007024 5.6e-23 112.5 73 75.3
TAR636G2347 Trochodendron aralioides HOM05D001937 ORTHO05D007024 1.4e-21 107.8 91 59.3
PRCOL_00004137 Prasinoderma coloniale HOM05D001937 ORTHO05D007024 4.9e-19 99.4 226 31.0
ECA234G4540 Erigeron canadensis HOM05D016619 ORTHO05D007024 1.2e-17 94.7 76 68.4
SalBow1G1280 Salvia bowleyana HOM05D001937 ORTHO05D007024 1.1e-15 88.2 68 63.2
SalBow2G0807 Salvia bowleyana HOM05D001937 ORTHO05D007024 2.5e-15 87.0 68 63.2
SalBow1G2752 Salvia bowleyana HOM05D001937 ORTHO05D007024 2.1e-14 84.0 68 61.8
Lalb_Chr16g0382841 Lupinus albus HOM05D001937 ORTHO05D007024 1.1e-13 81.6 52 75.0


User provided reference genes

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