Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu061526.2 Olea europaea HOM05D004858 ORTHO05D005600 2.3e-69 265.4 129 100.0
Oeu014311.1 Olea europaea HOM05D004858 ORTHO05D005600 1.5e-39 166.4 90 88.9
MSTRG.23644 Avicennia marina HOM05D004858 ORTHO05D005600 1.4e-37 159.8 90 83.3
Nitab4.5_0026287g0010 Nicotiana tabacum HOM05D004858 ORTHO05D005600 1.4e-34 149.8 90 78.9
SGA_v2.0_scaffold121G33088 Striga asiatica HOM05D004858 ORTHO05D005600 9.1e-34 147.1 91 76.9
SalBow3G1594 Salvia bowleyana HOM05D004858 ORTHO05D005600 4.5e-33 144.8 90 74.4
SalBow3G4557 Salvia bowleyana HOM05D004858 ORTHO05D005600 4.5e-33 144.8 90 74.4
Peaxi162Scf00118g01314 Petunia axillaris HOM05D004858 ORTHO05D005600 1.3e-32 143.3 90 74.4
Dinv23069 Davidia involucrata HOM05D004858 ORTHO05D005600 1.5e-31 139.8 90 73.3
Dinv26980 Davidia involucrata HOM05D004858 ORTHO05D005600 2.5e-31 139.0 87 78.2
Haze_03960 Corylus avellana HOM05D004858 ORTHO05D005600 7.2e-31 137.5 105 67.6
Cfa006798 Carpinus fangiana HOM05D004858 ORTHO05D005600 9.5e-31 137.1 91 74.7
arahy.Tifrunner.gnm1.ann1.J6YKXI Arachis hypogaea HOM05D004858 ORTHO05D005600 2.8e-30 135.6 91 72.5
Gorai.003G034000 Gossypium raimondii HOM05D004858 ORTHO05D005600 6.1e-30 134.4 90 73.3
Cc07_g07610 Coffea canephora HOM05D004858 ORTHO05D005600 8.0e-30 134.0 90 75.6
arahy.Tifrunner.gnm1.ann1.YV33P0 Arachis hypogaea HOM05D004858 ORTHO05D005600 1.0e-29 133.7 91 71.4
Migut.L00438 Erythranthe guttata HOM05D004858 ORTHO05D005600 1.8e-29 132.9 91 72.5
Gohir.D03G032400 Gossypium hirsutum HOM05D004858 ORTHO05D005600 1.8e-29 132.9 90 73.3
HanXRQChr09g0263081 Helianthus annuus HOM05D004858 ORTHO05D005600 2.3e-29 132.5 91 75.8
Gohir.A02G148000 Gossypium hirsutum HOM05D004858 ORTHO05D005600 3.0e-29 132.1 90 72.2
GSVIVG01006593001 Vitis vinifera HOM05D004858 ORTHO05D005600 3.0e-29 132.1 90 73.3
MBI16_g31809_MAGBIO Magnolia biondii HOM05D004858 ORTHO05D005600 4.0e-29 131.7 90 68.9
CANSAT01G1371 Cannabis sativa HOM05D004858 ORTHO05D005600 5.2e-29 131.3 90 70.0
Manes.12G119200 Manihot esculenta HOM05D004858 ORTHO05D005600 5.2e-29 131.3 94 73.4
PGR102G0524 Punica granatum HOM05D004858 ORTHO05D005600 6.8e-29 131.0 90 71.1
Ca_22084_v3 Cicer arietinum L. HOM05D004858 ORTHO05D005600 8.8e-29 130.6 91 68.1
MBI16_g05028_MAGBIO Magnolia biondii HOM05D004858 ORTHO05D005600 8.8e-29 130.6 87 71.3
Nn5g30705 Nelumbo nucifera HOM05D004858 ORTHO05D005600 8.8e-29 130.6 95 68.4
unitig_46.g18678 Utricularia gibba HOM05D004858 ORTHO05D005600 8.8e-29 130.6 91 72.5
Rhsim08G0089100 Rhododendron simsii HOM05D004858 ORTHO05D005600 1.2e-28 130.2 90 72.2
TAR628G1120 Trochodendron aralioides HOM05D004858 ORTHO05D005600 1.2e-28 130.2 90 68.9
CiPaw.07G039500 Carya illinoinensis HOM05D004858 ORTHO05D005600 1.5e-28 129.8 91 70.3
QL06p038187 Quercus lobata HOM05D004858 ORTHO05D005600 2.6e-28 129.0 91 70.3
Hma1.2p1_1953F.1_g308860 Hydrangea macrophylla HOM05D004858 ORTHO05D005600 4.4e-28 128.3 93 69.9
Nn6g34570 Nelumbo nucifera HOM05D004858 ORTHO05D005600 4.4e-28 128.3 90 72.2
CiPaw.08G148200 Carya illinoinensis HOM05D004858 ORTHO05D005600 5.7e-28 127.9 91 71.4
Glyma.05G110100 Glycine max HOM05D004858 ORTHO05D005600 7.5e-28 127.5 91 71.4
TWI74G1540 Tripterygium wilfordii HOM05D004858 ORTHO05D005600 9.8e-28 127.1 91 68.1
VMungo0251G0206 Vigna mungo HOM05D004858 ORTHO05D005600 9.8e-28 127.1 91 70.3
Atru.chr3.1087 Acer truncatum HOM05D004858 ORTHO05D005600 1.3e-27 126.7 91 71.4
CSS0041224 Camellia sinensis var. sinensis HOM05D004858 ORTHO05D005600 1.3e-27 126.7 90 67.8
CSS0047057 Camellia sinensis var. sinensis HOM05D004858 ORTHO05D005600 1.3e-27 126.7 90 67.8
CAN.G1061.6 Capsicum annuum HOM05D004858 ORTHO05D005600 1.3e-27 126.7 91 72.5
Actinidia36402 Actinidia chinensis HOM05D004858 ORTHO05D005600 1.7e-27 126.3 90 68.9
ATR0767G115 Amborella trichopoda HOM05D004858 ORTHO05D005600 1.7e-27 126.3 90 66.7
Cpa.g.sc129.47 Carica papaya HOM05D004858 ORTHO05D005600 1.7e-27 126.3 91 69.2
CDE02G3413 Ceratophyllum demersum HOM05D004858 ORTHO05D005600 1.7e-27 126.3 91 70.3
PGSC0003DMG400017913 Solanum tuberosum HOM05D004858 ORTHO05D005600 1.7e-27 126.3 90 66.7
Duzib147G0425 Durio zibethinus HOM05D004858 ORTHO05D005600 2.2e-27 125.9 91 70.3
Glyma.17G157000 Glycine max HOM05D004858 ORTHO05D005600 2.2e-27 125.9 91 71.4
CDE01G0584 Ceratophyllum demersum HOM05D004858 ORTHO05D005600 2.8e-27 125.6 90 70.0
Nitab4.5_0007790g0010 Nicotiana tabacum HOM05D004858 ORTHO05D005600 2.8e-27 125.6 91 68.1
Duzib187G0061 Durio zibethinus HOM05D004858 ORTHO05D005600 3.7e-27 125.2 91 70.3
HanXRQChr14g0447621 Helianthus annuus HOM05D004858 ORTHO05D005600 3.7e-27 125.2 91 71.4
unitig_37.g12385 Utricularia gibba HOM05D004858 ORTHO05D005600 3.7e-27 125.2 91 69.2
COL.COLO4_11647 Corchorus olitorius HOM05D004858 ORTHO05D005600 4.9e-27 124.8 91 70.3
Manes.13G106700 Manihot esculenta HOM05D004858 ORTHO05D005600 4.9e-27 124.8 93 67.7
HanXRQChr07g0203771 Helianthus annuus HOM05D004858 ORTHO05D005600 1.1e-26 123.6 91 69.2
Solyc02g091880.4 Solanum lycopersicum HOM05D004858 ORTHO05D005600 1.1e-26 123.6 91 69.2
Sopen02g036450 Solanum pennellii HOM05D004858 ORTHO05D005600 1.1e-26 123.6 91 69.2
THA.LOC104804193 Tarenaya hassleriana HOM05D004858 ORTHO05D005600 1.1e-26 123.6 90 68.9
Thecc.01G079800 Theobroma cacao HOM05D004858 ORTHO05D005600 1.1e-26 123.6 90 68.9
Gohir.A11G210700 Gossypium hirsutum HOM05D004858 ORTHO05D005600 1.8e-26 122.9 90 70.0
DCAR_025838 Daucus carota HOM05D004858 ORTHO05D005600 2.4e-26 122.5 91 68.1
Lsat_1_v5_gn_2_81581 Lactuca sativa HOM05D004858 ORTHO05D005600 2.4e-26 122.5 91 70.3
Ciclev10026828m.g Citrus clementina HOM05D004858 ORTHO05D005600 3.1e-26 122.1 88 70.5
Lalb_Chr16g0385901 Lupinus albus HOM05D004858 ORTHO05D005600 4.1e-26 121.7 94 70.2
Peaxi162Scf00096g01525 Petunia axillaris HOM05D004858 ORTHO05D005600 4.1e-26 121.7 91 69.2
Aqoxy6G01531 Aquilegia oxysepala HOM05D004858 ORTHO05D005600 5.4e-26 121.3 90 63.3
Lalb_Chr09g0329381 Lupinus albus HOM05D004858 ORTHO05D005600 5.4e-26 121.3 91 64.8
THA.LOC104807646 Tarenaya hassleriana HOM05D004858 ORTHO05D005600 7.0e-26 120.9 90 65.6
Lj4g0010254 Lotus japonicus HOM05D004858 ORTHO05D005600 9.2e-26 120.6 91 68.1
TAR381G0631 Trochodendron aralioides HOM05D004858 ORTHO05D005600 9.2e-26 120.6 90 66.7
Prupe.6G213100 Prunus persica HOM05D004858 ORTHO05D005600 1.6e-25 119.8 91 67.0
Sc16g0000840 Simmondsia chinensis HOM05D004858 ORTHO05D005600 1.6e-25 119.8 88 67.0
Carub.0007s0239 Capsella rubella HOM05D004858 ORTHO05D005600 2.0e-25 119.4 91 69.2
Potri.007G008800 Populus trichocarpa HOM05D004858 ORTHO05D005600 2.0e-25 119.4 90 64.4
Solyc03g043850.3 Solanum lycopersicum HOM05D004858 ORTHO05D005600 2.0e-25 119.4 90 63.3
THA.LOC104824932 Tarenaya hassleriana HOM05D004858 ORTHO05D005600 2.0e-25 119.4 90 67.8
ECA232G2479 Erigeron canadensis HOM05D004858 ORTHO05D005600 2.7e-25 119.0 93 68.8
Lalb_Chr05g0220461 Lupinus albus HOM05D004858 ORTHO05D005600 3.5e-25 118.6 94 69.1
ClCG10G008050 Citrullus lanatus HOM05D004858 ORTHO05D005600 4.5e-25 118.2 90 71.1
Lsat_1_v5_gn_4_159121 Lactuca sativa HOM05D004858 ORTHO05D005600 4.5e-25 118.2 91 69.2
MD02G1193900 Malus domestica HOM05D004858 ORTHO05D005600 4.5e-25 118.2 91 64.8
AL7G12840 Arabidopsis lyrata HOM05D004858 ORTHO05D005600 5.9e-25 117.9 91 69.2
Eucgr.I00649 Eucalyptus grandis HOM05D004858 ORTHO05D005600 5.9e-25 117.9 91 69.2
Thhalv10026651m.g Eutrema salsugineum HOM05D004858 ORTHO05D005600 5.9e-25 117.9 91 68.1
Gohir.D11G212400 Gossypium hirsutum HOM05D004858 ORTHO05D005600 5.9e-25 117.9 87 69.0
Gorai.007G228300 Gossypium raimondii HOM05D004858 ORTHO05D005600 5.9e-25 117.9 87 69.0
PGSC0003DMG400030258 Solanum tuberosum HOM05D004858 ORTHO05D005600 5.9e-25 117.9 92 63.0
EL10Ac6g14949 Beta vulgaris HOM05D004858 ORTHO05D005600 1.3e-24 116.7 88 64.8
Medtr4g097800 Medicago truncatula HOM05D004858 ORTHO05D005600 1.3e-24 116.7 92 66.3
Phvul.003G231600 Phaseolus vulgaris HOM05D004858 ORTHO05D005600 1.3e-24 116.7 91 65.9
CARHR246220 Cardamine hirsuta HOM05D004858 ORTHO05D005600 1.7e-24 116.3 90 67.8
FvH4_1g18620 Fragaria vesca HOM05D004858 ORTHO05D005600 2.3e-24 115.9 91 65.9
FAN19G1409 Fragaria x ananassa HOM05D004858 ORTHO05D005600 2.3e-24 115.9 91 65.9
AT4G37830 Arabidopsis thaliana HOM05D004858 ORTHO05D005600 2.9e-24 115.5 90 65.6
FAN26G1754 Fragaria x ananassa HOM05D004858 ORTHO05D005600 2.9e-24 115.5 91 65.9
FAN23G1848 Fragaria x ananassa HOM05D004858 ORTHO05D005600 3.8e-24 115.2 91 65.9
Os03g0772800 Oryza sativa ssp. japonica HOM05D004858 ORTHO05D005600 3.8e-24 115.2 91 67.0
CsaV3_3G007040 Cucumis sativus L. HOM05D004858 ORTHO05D005600 5.0e-24 114.8 90 67.8
Sabra07G0006800 Salix brachista HOM05D004858 ORTHO05D005600 5.0e-24 114.8 111 56.8
TPR.G22417 Trifolium pratense HOM05D004858 ORTHO05D005600 5.0e-24 114.8 92 66.3
AUR62003145 Chenopodium quinoa HOM05D004858 ORTHO05D005600 8.6e-24 114.0 98 61.2
FAN28G0049 Fragaria x ananassa HOM05D004858 ORTHO05D005600 8.6e-24 114.0 91 64.8
A08p22870 Brassica napus HOM05D004858 ORTHO05D005600 1.1e-23 113.6 91 65.9
PSO675G0895 Papaver somniferum HOM05D004858 ORTHO05D005600 1.9e-23 112.8 90 62.2
ECA238G2402 Erigeron canadensis HOM05D004858 ORTHO05D005600 2.5e-23 112.5 91 63.7
RcHm_v2.0_Chr2g0109411 Rosa chinensis HOM05D004858 ORTHO05D005600 2.5e-23 112.5 91 64.8
Duzib264G0490 Durio zibethinus HOM05D004858 ORTHO05D005600 3.3e-23 112.1 90 63.3
Zm00001eb058950 Zea mays HOM05D004858 ORTHO05D005600 3.3e-23 112.1 106 57.5
Sp7g35470 Schrenkiella parvula HOM05D004858 ORTHO05D005600 4.3e-23 111.7 90 64.4
BcaC01g00373 Brassica carinata HOM05D004858 ORTHO05D005600 7.3e-23 110.9 90 64.4
BolC3t20143H Brassica oleracea HOM05D004858 ORTHO05D005600 7.3e-23 110.9 90 64.4
Psat4g088320 Pisum sativum HOM05D004858 ORTHO05D005600 9.5e-23 110.5 91 61.5
CSS0011371 Camellia sinensis var. sinensis HOM05D004858 ORTHO05D005600 1.2e-22 110.2 89 64.0
Nitab4.5_0002639g0030 Nicotiana tabacum HOM05D004858 ORTHO05D005600 1.2e-22 110.2 76 72.4
Sed0006730 Sechium edule HOM05D004858 ORTHO05D005600 2.1e-22 109.4 90 64.4
AUR62007965 Chenopodium quinoa HOM05D004858 ORTHO05D005600 2.8e-22 109.0 93 61.3
CiPaw.10G150100 Carya illinoinensis HOM05D004858 ORTHO05D005600 3.6e-22 108.6 79 63.3
HPP92_024955 Vanilla planifolia HOM05D004858 ORTHO05D005600 1.0e-21 107.1 96 59.4
TWI77G0309 Tripterygium wilfordii HOM05D004858 ORTHO05D005600 3.0e-21 105.5 88 59.1
Aa31LG6G14730 Aethionema arabicum HOM05D004858 ORTHO05D005600 1.5e-20 103.2 119 52.1
DCAR_021459 Daucus carota HOM05D004858 ORTHO05D005600 1.5e-20 103.2 90 61.1
C01p01370 Brassica napus HOM05D004858 ORTHO05D005600 2.0e-20 102.8 90 57.8
BolC1t00134H Brassica oleracea HOM05D004858 ORTHO05D005600 7.5e-20 100.9 90 56.7
MD15G1304000 Malus domestica HOM05D004858 ORTHO05D005600 3.7e-19 98.6 91 58.2
vmacro18001 Vaccinium macrocarpon HOM05D004858 ORTHO05D005600 7.0e-18 94.4 49 79.6
CSS0003752 Camellia sinensis var. sinensis HOM05D004858 ORTHO05D005600 1.6e-17 93.2 76 63.2
Nitab4.5_0000396g0060 Nicotiana tabacum HOM05D004858 ORTHO05D005600 4.6e-17 91.7 77 62.3
HPP92_021258 Vanilla planifolia HOM05D000682 ORTHO05D000510 1.0e-16 90.5 72 61.1
Ah.03g139600 Amaranthus hybridus HOM05D004858 ORTHO05D005600 3.9e-16 88.6 74 62.2
PGSC0003DMG400030628 Solanum tuberosum HOM05D004858 ORTHO05D005600 5.0e-16 88.2 77 62.3
BraA08t34250Z Brassica rapa HOM05D004858 ORTHO05D005600 1.2e-14 83.6 77 62.3
MELO3C014946.2 Cucumis melo HOM05D004858 ORTHO05D005600 1.6e-14 83.2 76 63.2
Hund16598 Selenicereus undatus HOM05D004858 ORTHO05D005600 4.7e-14 81.6 74 59.5
Sc03g0000690 Simmondsia chinensis HOM05D004858 ORTHO05D005600 8.0e-14 80.9 78 57.7
C03p79020 Brassica napus HOM05D004858 ORTHO05D005600 1.4e-13 80.1 76 59.2
Mapoly0043s0104 Marchantia polymorpha HOM05D004858 ORTHO05D005600 2.6e-12 75.9 75 50.7
vmacro22430 Vaccinium macrocarpon HOM05D004858 ORTHO05D005600 1.6e-09 66.6 35 77.1
Pp3c5_3360 Physcomitrium patens HOM05D004858 ORTHO05D005600 3.5e-09 65.5 92 44.6
Pp3c6_25050 Physcomitrium patens HOM05D004858 ORTHO05D005600 3.5e-09 65.5 94 42.6
AagrBONN_evm.TU.Sc2ySwM_344.1653 Anthoceros agrestis HOM05D004858 ORTHO05D005600 6.0e-09 64.7 83 43.4
SHI12046 Sapria himalayana HOM05D004858 ORTHO05D005600 1.0e-08 63.9 36 75.0
BraA01t00120Z Brassica rapa HOM05D004858 ORTHO05D005600 1.7e-08 63.2 93 46.2
CBR_g50891 Chara braunii HOM05D004858 ORTHO05D005600 2.5e-07 59.3 99 38.4
arahy.Tifrunner.gnm1.ann1.0N5P6D Arachis hypogaea HOM05D004858 ORTHO05D005600 2.8e-06 55.8 54 57.4
arahy.Tifrunner.gnm1.ann1.HTA6FY Arachis hypogaea HOM05D004858 ORTHO05D005600 2.8e-06 55.8 54 57.4
SEGI_12659 Sequoiadendron giganteum HOM05D004858 ORTHO05D005600 3.6e-06 55.5 79 45.6


User provided reference genes

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