Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu061480.1 Olea europaea HOM05D001952 ORTHO05D004913 1.0e-224 783.1 400 100.0
Oeu024552.2 Olea europaea HOM05D001952 ORTHO05D004913 1.1e-64 251.5 480 39.0
vmacro19640 Vaccinium macrocarpon HOM05D001952 ORTHO05D004913 3.3e-42 176.8 454 33.0
Migut.D01755 Erythranthe guttata HOM05D001952 ORTHO05D004913 2.2e-41 174.1 465 29.9
Migut.L00973 Erythranthe guttata HOM05D001952 ORTHO05D004913 4.8e-41 172.9 465 29.5
Lj6A55T16 Lonicera japonica HOM05D001952 ORTHO05D004913 1.1e-40 171.8 481 30.4
Hma1.2p1_0132F.1_g060740 Hydrangea macrophylla HOM05D001952 ORTHO05D004913 1.8e-40 171.0 479 30.1
Migut.L00878 Erythranthe guttata HOM05D001952 ORTHO05D004913 3.8e-38 163.3 453 29.8
CSS0039830 Camellia sinensis var. sinensis HOM05D001952 ORTHO05D004913 3.2e-37 160.2 480 29.8
SalBow7G2566 Salvia bowleyana HOM05D001952 ORTHO05D004913 1.6e-36 157.9 466 29.2
Cc02_g37060 Coffea canephora HOM05D001952 ORTHO05D004913 2.1e-36 157.5 489 29.9
Lsat_1_v5_gn_7_6921 Lactuca sativa HOM05D001952 ORTHO05D004913 2.1e-36 157.5 468 28.8
CSS0007104 Camellia sinensis var. sinensis HOM05D001952 ORTHO05D004913 8.0e-36 155.6 480 29.4
DCAR_006897 Daucus carota HOM05D001952 ORTHO05D004913 4.0e-35 153.3 469 28.6
Nitab4.5_0003477g0020 Nicotiana tabacum HOM05D001952 ORTHO05D004913 6.7e-35 152.5 473 29.4
Nitab4.5_0000603g0070 Nicotiana tabacum HOM05D001952 ORTHO05D004913 3.3e-34 150.2 473 28.5
Hund16968 Selenicereus undatus HOM05D001952 ORTHO05D004913 3.3e-34 150.2 479 28.2
AUR62033377 Chenopodium quinoa HOM05D001952 ORTHO05D004913 2.8e-33 147.1 478 28.9
Haze_16907 Corylus avellana HOM05D001952 ORTHO05D004913 4.8e-33 146.4 468 29.1
QL08p050945 Quercus lobata HOM05D001952 ORTHO05D004913 6.3e-33 146.0 475 29.7
SGA_v2.0_scaffold7G04047 Striga asiatica HOM05D001952 ORTHO05D004913 1.4e-32 144.8 480 27.7
CANSAT56G1737 Cannabis sativa HOM05D001952 ORTHO05D004913 1.8e-32 144.4 480 28.1
Potri.014G074900 Populus trichocarpa HOM05D001952 ORTHO05D004913 2.4e-32 144.1 494 29.6
Rhsim05G0144200 Rhododendron simsii HOM05D001952 ORTHO05D004913 2.4e-32 144.1 466 28.8
Sabra14G0053600 Salix brachista HOM05D001952 ORTHO05D004913 2.4e-32 144.1 482 29.5
Haze_00291 Corylus avellana HOM05D001952 ORTHO05D004913 3.1e-32 143.7 459 28.8
ECA236G1094 Erigeron canadensis HOM05D001952 ORTHO05D004913 3.1e-32 143.7 460 29.3
RcHm_v2.0_Chr1g0313121 Rosa chinensis HOM05D001952 ORTHO05D004913 5.3e-32 142.9 447 28.6
PGSC0003DMG400016476 Solanum tuberosum HOM05D001952 ORTHO05D004913 5.3e-32 142.9 473 28.8
EL10Ac1g00960 Beta vulgaris HOM05D001952 ORTHO05D004913 1.2e-31 141.7 480 26.7
CAN.G1014.4 Capsicum annuum HOM05D001952 ORTHO05D004913 1.6e-31 141.4 466 29.2
Manes.05G041100 Manihot esculenta HOM05D001952 ORTHO05D004913 3.5e-31 140.2 473 28.3
Phvul.005G009900 Phaseolus vulgaris HOM05D001952 ORTHO05D004913 3.5e-31 140.2 460 29.1
MELO3C003326.2 Cucumis melo HOM05D001952 ORTHO05D004913 5.9e-31 139.4 481 27.2
Thecc.07G183300 Theobroma cacao HOM05D001952 ORTHO05D004913 5.9e-31 139.4 483 27.3
Peaxi162Scf00231g00244 Petunia axillaris HOM05D001952 ORTHO05D004913 7.7e-31 139.0 473 29.0
Sopen02g025360 Solanum pennellii HOM05D001952 ORTHO05D004913 1.3e-30 138.3 473 28.8
Solyc02g080650.3 Solanum lycopersicum HOM05D001952 ORTHO05D004913 1.7e-30 137.9 473 28.3
Ah.05g175860 Amaranthus hybridus HOM05D001952 ORTHO05D004913 8.5e-30 135.6 479 26.9
AUR62004280 Chenopodium quinoa HOM05D001952 ORTHO05D004913 8.5e-30 135.6 478 27.6
TAR375G0220 Trochodendron aralioides HOM05D001952 ORTHO05D004913 1.5e-29 134.8 480 29.0
ClCG09G012850 Citrullus lanatus HOM05D001952 ORTHO05D004913 1.9e-29 134.4 478 27.2
Ciclev10004825m.g Citrus clementina HOM05D001952 ORTHO05D004913 1.9e-29 134.4 480 27.5
HanXRQChr04g0122171 Helianthus annuus HOM05D001952 ORTHO05D004913 1.9e-29 134.4 466 27.0
unitig_0.g170 Utricularia gibba HOM05D001952 ORTHO05D004913 2.5e-29 134.0 463 27.2
Sc02g0002270 Simmondsia chinensis HOM05D001952 ORTHO05D004913 3.2e-29 133.7 473 27.3
GSVIVG01026499001 Vitis vinifera HOM05D001952 ORTHO05D008796 5.5e-29 132.9 256 39.5
Gohir.A01G099700 Gossypium hirsutum HOM05D001952 ORTHO05D004913 9.4e-29 132.1 477 26.8
PGSC0003DMG402027917 Solanum tuberosum HOM05D001952 ORTHO05D004913 1.2e-28 131.7 461 28.9
Gorai.002G109800 Gossypium raimondii HOM05D001952 ORTHO05D004913 1.6e-28 131.3 476 26.9
Cpa.g.sc753.2 Carica papaya HOM05D001952 ORTHO05D004913 2.1e-28 131.0 476 26.9
Eucgr.H05060 Eucalyptus grandis HOM05D001952 ORTHO05D004913 2.7e-28 130.6 477 26.2
FAN06G4730 Fragaria x ananassa HOM05D001952 ORTHO05D004913 2.7e-28 130.6 485 27.4
RcHm_v2.0_Chr1g0351801 Rosa chinensis HOM05D001952 ORTHO05D004913 2.7e-28 130.6 479 26.3
FvH4_7g08540 Fragaria vesca HOM05D001952 ORTHO05D004913 4.7e-28 129.8 485 27.4
Glyma.18G215400 Glycine max HOM05D001952 ORTHO05D004913 4.7e-28 129.8 491 27.3
FAN10G1564 Fragaria x ananassa HOM05D001952 ORTHO05D004913 6.1e-28 129.4 485 27.2
FAN03G2676 Fragaria x ananassa HOM05D001952 ORTHO05D004913 8.0e-28 129.0 484 26.7
FAN10G0713 Fragaria x ananassa HOM05D001952 ORTHO05D004913 1.0e-27 128.6 485 27.0
Medtr7g075940 Medicago truncatula HOM05D001952 ORTHO05D004913 1.8e-27 127.9 452 29.0
COL.COLO4_19760 Corchorus olitorius HOM05D001952 ORTHO05D004913 5.2e-27 126.3 474 25.7
MBI05_g28393_MAGBIO Magnolia biondii HOM05D001952 ORTHO05D004913 6.8e-27 125.9 461 26.7
MBI17_g11655_MAGBIO Magnolia biondii HOM05D001952 ORTHO05D004913 6.8e-27 125.9 452 27.0
MD15G1435200 Malus domestica HOM05D001952 ORTHO05D004913 6.8e-27 125.9 479 25.5
PSO782G1679 Papaver somniferum HOM05D001952 ORTHO05D004913 6.8e-27 125.9 476 27.1
Migut.D01751 Erythranthe guttata HOM05D001952 ORTHO05D004913 8.8e-27 125.6 233 37.3
Gohir.D01G084100 Gossypium hirsutum HOM05D001952 ORTHO05D004913 1.2e-26 125.2 476 26.5
PGR004G1086 Punica granatum HOM05D001952 ORTHO05D004913 1.2e-26 125.2 480 25.6
Duzib213G0290 Durio zibethinus HOM05D001952 ORTHO05D004913 2.0e-26 124.4 497 25.2
Phvul.005G010100 Phaseolus vulgaris HOM05D001952 ORTHO05D005568 2.0e-26 124.4 476 27.1
Atru.chr1.534 Acer truncatum HOM05D001952 ORTHO05D004913 2.6e-26 124.0 472 26.1
TWI34G0947 Tripterygium wilfordii HOM05D001952 ORTHO05D004913 3.4e-26 123.6 472 26.7
Sed0000408 Sechium edule HOM05D001952 ORTHO05D004913 7.5e-26 122.5 478 26.2
Dinv32411 Davidia involucrata HOM05D001952 ORTHO05D004913 1.3e-25 121.7 357 29.4
BraA09t35698Z Brassica rapa HOM05D001952 ORTHO05D004913 1.7e-25 121.3 454 25.8
PSO478G1189 Papaver somniferum HOM05D001952 ORTHO05D004913 2.2e-25 120.9 477 26.6
Lalb_Chr19g0127181 Lupinus albus HOM05D001952 ORTHO05D004913 2.8e-25 120.6 473 27.5
Psat3g112920 Pisum sativum HOM05D001952 ORTHO05D004913 2.8e-25 120.6 463 27.4
THA.LOC104801468 Tarenaya hassleriana HOM05D001952 ORTHO05D004913 3.7e-25 120.2 464 27.6
CiPaw.02G175900 Carya illinoinensis HOM05D001952 ORTHO05D004913 4.8e-25 119.8 379 28.8
Aa31LG11G5430 Aethionema arabicum HOM05D001952 ORTHO05D004913 8.3e-25 119.0 454 26.0
BcaB01g02233 Brassica carinata HOM05D001952 ORTHO05D004913 8.3e-25 119.0 464 25.6
VMungo1383G2849 Vigna mungo HOM05D001952 ORTHO05D004913 1.1e-24 118.6 492 26.0
A09p00620 Brassica napus HOM05D001952 ORTHO05D004913 1.4e-24 118.2 455 26.2
Aa31LG4G9800 Aethionema arabicum HOM05D001952 ORTHO05D004913 1.8e-24 117.9 460 26.1
Gohir.A01G099100 Gossypium hirsutum HOM05D001952 ORTHO05D004913 1.8e-24 117.9 406 28.1
Gohir.D01G083600 Gossypium hirsutum HOM05D001952 ORTHO05D004913 1.8e-24 117.9 476 25.6
C09p00240 Brassica napus HOM05D001952 ORTHO05D004913 2.4e-24 117.5 457 26.0
Aqoxy2G02797 Aquilegia oxysepala HOM05D001952 ORTHO05D004913 3.1e-24 117.1 465 25.8
Aqoxy5G00703 Aquilegia oxysepala HOM05D001952 ORTHO05D004913 4.1e-24 116.7 465 26.5
TAR624G0159 Trochodendron aralioides HOM05D001952 ORTHO05D004913 5.4e-24 116.3 451 27.3
Lj5g0018602 Lotus japonicus HOM05D001952 ORTHO05D004913 7.0e-24 115.9 471 26.8
AT4G00231 Arabidopsis thaliana HOM05D001952 ORTHO05D004913 1.6e-23 114.8 463 27.2
CARHR248310 Cardamine hirsuta HOM05D001952 ORTHO05D004913 4.5e-23 113.2 469 25.4
FAN06G0845 Fragaria x ananassa HOM05D001952 ORTHO05D004913 7.7e-23 112.5 482 25.3
FAN06G0866 Fragaria x ananassa HOM05D001952 ORTHO05D004913 7.7e-23 112.5 482 25.3
arahy.Tifrunner.gnm1.ann1.U9VUHP Arachis hypogaea HOM05D001952 ORTHO05D004913 1.0e-22 112.1 475 26.1
arahy.Tifrunner.gnm1.ann1.Z6RYGL Arachis hypogaea HOM05D001952 ORTHO05D004913 1.0e-22 112.1 475 26.1
Hund09554 Selenicereus undatus HOM05D001952 ORTHO05D004913 1.0e-22 112.1 329 27.1
AL6G53250 Arabidopsis lyrata HOM05D001952 ORTHO05D004913 1.7e-22 111.3 471 26.3
Carub.0005s0957 Capsella rubella HOM05D001952 ORTHO05D004913 1.7e-22 111.3 476 26.9
FvH4_7g12770 Fragaria vesca HOM05D001952 ORTHO05D004913 2.2e-22 110.9 483 25.1
Peaxi162Scf00207g01356 Petunia axillaris HOM05D001952 ORTHO05D004913 2.2e-22 110.9 522 25.7
BcaC04g24187 Brassica carinata HOM05D001952 ORTHO05D004913 5.0e-22 109.8 459 25.5
TPR.G23686 Trifolium pratense HOM05D001952 ORTHO05D012360 6.5e-22 109.4 291 32.0
BolC9t52959H Brassica oleracea HOM05D001952 ORTHO05D004913 1.1e-21 108.6 463 25.7
FAN01G0405 Fragaria x ananassa HOM05D001952 ORTHO05D004913 1.1e-21 108.6 338 27.8
Psat4g209120 Pisum sativum HOM05D001952 ORTHO05D004913 1.9e-21 107.8 463 26.1
Thhalv10025092m.g Eutrema salsugineum HOM05D001952 ORTHO05D004913 2.5e-21 107.5 462 25.3
Gorai.002G109400 Gossypium raimondii HOM05D001952 ORTHO05D004913 3.2e-21 107.1 248 33.1
Sp6g00320 Schrenkiella parvula HOM05D001952 ORTHO05D004913 4.2e-21 106.7 448 24.8
CsaV3_3G049900 Cucumis sativus L. HOM05D001952 ORTHO05D004913 7.2e-21 105.9 371 25.9
arahy.Tifrunner.gnm1.ann1.7790ZZ Arachis hypogaea HOM05D001952 ORTHO05D004913 2.1e-20 104.4 472 25.6
CDE01G0692 Ceratophyllum demersum HOM05D001952 ORTHO05D004913 8.0e-20 102.4 403 26.8
vmacro08923 Vaccinium macrocarpon HOM05D001952 ORTHO05D004913 2.3e-19 100.9 300 31.0
Eucgr.I00835 Eucalyptus grandis HOM05D001952 ORTHO05D004913 6.8e-19 99.4 304 28.6
Prupe.2G152200 Prunus persica HOM05D001952 ORTHO05D004913 8.8e-19 99.0 356 25.6
Glyma.09G276502 Glycine max HOM05D001952 ORTHO05D004913 4.1e-16 90.1 244 34.4
PSO541G2051 Papaver somniferum HOM05D001952 ORTHO05D004913 5.4e-16 89.7 235 33.2
TPR.G13243 Trifolium pratense HOM05D001952 ORTHO05D004913 9.2e-16 89.0 62 67.7
TPR.G34261 Trifolium pratense HOM05D001952 ORTHO05D004913 9.2e-16 89.0 62 67.7
TPR.G6584 Trifolium pratense HOM05D001952 ORTHO05D004913 1.6e-15 88.2 62 67.7
TPR.G18232 Trifolium pratense HOM05D001952 ORTHO05D004913 2.0e-15 87.8 62 66.1
Cfa001612 Carpinus fangiana HOM05D001952 ORTHO05D004913 3.5e-15 87.0 53 73.6
Ca_07850_v3 Cicer arietinum L. HOM05D001952 ORTHO05D004913 3.5e-15 87.0 53 69.8
ATR0820G267 Amborella trichopoda HOM05D001952 ORTHO05D004913 7.8e-15 85.9 59 62.7
MD07G1124700 Malus domestica HOM05D001952 ORTHO05D004913 1.5e-13 81.6 51 68.6
Lj4g0006210 Lotus japonicus HOM05D001952 ORTHO05D004913 3.3e-13 80.5 448 24.8
Sopen04g024480 Solanum pennellii HOM05D001952 ORTHO05D004913 4.3e-13 80.1 52 67.3
PSO782G4203 Papaver somniferum HOM05D001952 ORTHO05D004913 5.6e-13 79.7 145 31.7
Aa31LG10G10140 Aethionema arabicum HOM05D001952 ORTHO05D004913 7.3e-13 79.3 229 31.0
Eucgr.I00845 Eucalyptus grandis HOM05D001952 ORTHO05D004913 1.2e-12 78.6 59 52.5
CBR_g31682 Chara braunii HOM05D001952 ORTHO05D004913 1.6e-12 78.2 53 60.4
SEGI_14537 Sequoiadendron giganteum HOM05D001952 ORTHO05D004913 3.6e-12 77.0 63 58.7
Lj6A55T17 Lonicera japonica HOM05D001952 ORTHO05D004913 8.0e-12 75.9 141 39.0
SEGI_08371 Sequoiadendron giganteum HOM05D001952 ORTHO05D004913 1.4e-11 75.1 55 60.0
SEGI_36330 Sequoiadendron giganteum HOM05D001952 ORTHO05D004913 1.4e-11 75.1 55 60.0
Carub.0006s2681 Capsella rubella HOM05D001952 ORTHO05D004913 4.0e-11 73.6 237 31.2
Potri.008G158901 Populus trichocarpa HOM05D001952 ORTHO05D004913 8.9e-11 72.4 64 60.9
Os03g0118900 Oryza sativa ssp. japonica HOM05D001952 ORTHO05D004913 3.4e-10 70.5 59 50.8
Mapoly0062s0112 Marchantia polymorpha HOM05D001952 ORTHO05D004913 4.4e-10 70.1 54 53.7
Zm00001eb001350 Zea mays HOM05D001952 ORTHO05D004913 1.3e-09 68.6 59 52.5
AagrBONN_evm.TU.Sc2ySwM_117.782 Anthoceros agrestis HOM05D001952 ORTHO05D004913 6.4e-09 66.2 53 52.8
Cre08.g374300 Chlamydomonas reinhardtii HOM05D001952 ORTHO05D004913 4.1e-08 63.5 63 47.6
MD07G1124800 Malus domestica HOM05D001952 ORTHO05D004913 5.4e-08 63.2 143 32.2
SMO351G0039 Selaginella moellendorffii HOM05D001952 ORTHO05D004913 1.6e-07 61.6 42 57.1
Lj1g0014823 Lotus japonicus HOM05D001952 ORTHO05D004913 4.6e-07 60.1 35 71.4
Pp3c21_1420 Physcomitrium patens HOM05D001952 ORTHO05D004913 5.9e-07 59.7 51 47.1
TPR.G34267 Trifolium pratense HOM05D001952 ORTHO05D004913 1.7e-06 58.2 135 34.8
PSO781G0092 Papaver somniferum HOM05D001952 ORTHO05D004913 5.0e-06 56.6 251 26.3


User provided reference genes

Program Settings