Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu061402.1 Olea europaea HOM05D003994 ORTHO05D004957 1.3e-117 426.4 216 100.0
Oeu005708.1 Olea europaea HOM05D003994 ORTHO05D004957 1.1e-108 396.7 211 93.4
Migut.N01321 Erythranthe guttata HOM05D003994 ORTHO05D004957 5.2e-98 361.3 207 86.0
SGA_v2.0_scaffold16G07672 Striga asiatica HOM05D003994 ORTHO05D004957 3.7e-96 355.1 207 83.1
SGA_v2.0_scaffold3G01602 Striga asiatica HOM05D003994 ORTHO05D004957 1.4e-95 353.2 207 82.1
MSTRG.27636 Avicennia marina HOM05D003994 ORTHO05D004957 2.4e-95 352.4 207 84.1
Solyc08g005985.1 Solanum lycopersicum HOM05D003994 ORTHO05D004957 2.2e-93 345.9 207 81.2
Sopen08g001960 Solanum pennellii HOM05D003994 ORTHO05D004957 2.2e-93 345.9 207 81.2
PGSC0003DMG401014852 Solanum tuberosum HOM05D003994 ORTHO05D004957 6.5e-93 344.4 207 80.7
Nitab4.5_0001583g0200 Nicotiana tabacum HOM05D003994 ORTHO05D004957 7.2e-92 340.9 207 79.2
Nitab4.5_0001225g0220 Nicotiana tabacum HOM05D003994 ORTHO05D004957 2.7e-91 339.0 207 78.7
CAN.G940.12 Capsicum annuum HOM05D003994 ORTHO05D004957 4.7e-91 338.2 207 79.2
HanXRQChr10g0295951 Helianthus annuus HOM05D003994 ORTHO05D004957 3.4e-89 332.0 207 78.7
HanXRQChr16g0514761 Helianthus annuus HOM05D003994 ORTHO05D004957 4.4e-89 331.6 207 78.3
ECA234G2975 Erigeron canadensis HOM05D003994 ORTHO05D004957 1.7e-88 329.7 207 77.3
Lsat_1_v5_gn_8_167161 Lactuca sativa HOM05D003994 ORTHO05D004957 1.1e-87 327.0 207 76.3
Dinv41938 Davidia involucrata HOM05D003994 ORTHO05D004957 1.8e-87 326.2 207 77.8
CSS0048612 Camellia sinensis var. sinensis HOM05D003994 ORTHO05D004957 1.2e-86 323.6 207 75.4
AUR62037910 Chenopodium quinoa HOM05D003994 ORTHO05D004957 1.2e-86 323.6 211 73.5
TWI79G1032 Tripterygium wilfordii HOM05D003994 ORTHO05D004957 7.7e-86 320.9 209 75.6
CSS0002177 Camellia sinensis var. sinensis HOM05D003994 ORTHO05D004957 1.3e-85 320.1 207 74.4
Hma1.2p1_0163F.1_g072490 Hydrangea macrophylla HOM05D003994 ORTHO05D004957 1.7e-85 319.7 203 78.3
DCAR_025322 Daucus carota HOM05D003994 ORTHO05D004957 2.2e-85 319.3 199 77.9
Rhsim12G0069500 Rhododendron simsii HOM05D003994 ORTHO05D004957 3.8e-85 318.5 207 74.9
Actinidia00624 Actinidia chinensis HOM05D003994 ORTHO05D004957 8.5e-85 317.4 221 73.3
EL10Ac9g21377 Beta vulgaris HOM05D003994 ORTHO05D004957 8.5e-85 317.4 206 73.3
PGR042G1915 Punica granatum HOM05D003994 ORTHO05D004957 8.5e-85 317.4 202 76.7
AT4G38570 Arabidopsis thaliana HOM05D003994 ORTHO05D004957 1.9e-84 316.2 204 74.5
Ah.01g023020 Amaranthus hybridus HOM05D003994 ORTHO05D004957 2.5e-84 315.8 213 72.8
A08p24160 Brassica napus HOM05D003994 ORTHO05D004957 4.2e-84 315.1 207 73.4
Rhsim05G0056700 Rhododendron simsii HOM05D003994 ORTHO05D004957 4.2e-84 315.1 207 74.9
Cfa005247 Carpinus fangiana HOM05D003994 ORTHO05D004957 5.5e-84 314.7 204 73.5
BcaC01g00237 Brassica carinata HOM05D003994 ORTHO05D004957 9.4e-84 313.9 204 75.0
BraA08t34371Z Brassica rapa HOM05D003994 ORTHO05D004957 9.4e-84 313.9 206 73.8
Haze_02136 Corylus avellana HOM05D003994 ORTHO05D004957 9.4e-84 313.9 204 73.5
CANSAT56G2628 Cannabis sativa HOM05D003994 ORTHO05D004957 1.2e-83 313.5 209 73.2
SalBow3G1772 Salvia bowleyana HOM05D003994 ORTHO05D004957 1.6e-83 313.2 187 79.7
CiPaw.05G082400 Carya illinoinensis HOM05D003994 ORTHO05D004957 2.7e-83 312.4 201 75.1
CANSAT25G2109 Cannabis sativa HOM05D003994 ORTHO05D004957 3.6e-83 312.0 202 74.8
Nn3g20343 Nelumbo nucifera HOM05D003994 ORTHO05D004957 6.1e-83 311.2 202 75.7
Cc09_g07710 Coffea canephora HOM05D003994 ORTHO05D004957 8.0e-83 310.8 202 74.8
THA.LOC104824762 Tarenaya hassleriana HOM05D003994 ORTHO05D004957 1.0e-82 310.5 204 75.0
Atru.chr5.3321 Acer truncatum HOM05D003994 ORTHO05D004957 1.4e-82 310.1 209 73.2
CiPaw.06G111900 Carya illinoinensis HOM05D003994 ORTHO05D004957 1.4e-82 310.1 207 72.9
MD10G1124800 Malus domestica HOM05D003994 ORTHO05D004957 1.4e-82 310.1 202 74.8
Prupe.7G263800 Prunus persica HOM05D003994 ORTHO05D004957 3.0e-82 308.9 202 74.3
Manes.04G058800 Manihot esculenta HOM05D003994 ORTHO05D004957 6.8e-82 307.8 209 71.8
Hund16215 Selenicereus undatus HOM05D003994 ORTHO05D004957 6.8e-82 307.8 207 72.5
Eucgr.I01421 Eucalyptus grandis HOM05D003994 ORTHO05D004957 8.8e-82 307.4 203 72.9
Thhalv10026160m.g Eutrema salsugineum HOM05D003994 ORTHO05D004957 1.2e-81 307.0 202 73.3
Gorai.002G198300 Gossypium raimondii HOM05D003994 ORTHO05D004957 1.2e-81 307.0 204 74.0
MD05G1122300 Malus domestica HOM05D003994 ORTHO05D004957 1.2e-81 307.0 202 74.8
Aa31LG6G16590 Aethionema arabicum HOM05D003994 ORTHO05D004957 1.5e-81 306.6 204 73.0
Sp5g23020 Schrenkiella parvula HOM05D003994 ORTHO05D004957 2.0e-81 306.2 205 73.2
Thhalv10019092m.g Eutrema salsugineum HOM05D003994 ORTHO05D004957 2.6e-81 305.8 205 72.7
FvH4_2g13710 Fragaria vesca HOM05D003994 ORTHO05D004957 2.6e-81 305.8 211 71.6
Sc08g0002910 Simmondsia chinensis HOM05D003994 ORTHO05D004957 2.6e-81 305.8 207 71.5
BcaB03g15393 Brassica carinata HOM05D003994 ORTHO05D004957 3.4e-81 305.4 205 72.2
A07p32200 Brassica napus HOM05D003994 ORTHO05D004957 3.4e-81 305.4 205 71.7
FAN20G1157 Fragaria x ananassa HOM05D003994 ORTHO05D004957 3.4e-81 305.4 211 71.6
Sp7g37200 Schrenkiella parvula HOM05D003994 ORTHO05D004957 3.4e-81 305.4 204 72.5
CsaV3_2G016120 Cucumis sativus L. HOM05D003994 ORTHO05D004957 4.4e-81 305.1 209 71.3
FAN27G1606 Fragaria x ananassa HOM05D003994 ORTHO05D004957 4.4e-81 305.1 211 71.6
RcHm_v2.0_Chr7g0224781 Rosa chinensis HOM05D003994 ORTHO05D004957 5.7e-81 304.7 211 70.1
BolC2t08504H Brassica oleracea HOM05D003994 ORTHO05D004957 7.5e-81 304.3 205 71.2
Sed0013006 Sechium edule HOM05D003994 ORTHO05D004957 7.5e-81 304.3 209 70.3
BcaB03g15140 Brassica carinata HOM05D003994 ORTHO05D004957 9.8e-81 303.9 205 71.2
CARHR060640 Cardamine hirsuta HOM05D003994 ORTHO05D004957 9.8e-81 303.9 205 72.7
FvH4_2g14000 Fragaria vesca HOM05D003994 ORTHO05D004957 9.8e-81 303.9 211 71.1
TAR376G0382 Trochodendron aralioides HOM05D003994 ORTHO05D004957 9.8e-81 303.9 207 71.5
AL2G26920 Arabidopsis lyrata HOM05D003994 ORTHO05D004957 1.3e-80 303.5 205 71.7
BcaB05g24329 Brassica carinata HOM05D003994 ORTHO05D004957 1.3e-80 303.5 205 71.2
Duzib248G0985 Durio zibethinus HOM05D003994 ORTHO05D004957 1.3e-80 303.5 204 74.0
Gohir.A01G168900 Gossypium hirsutum HOM05D003994 ORTHO05D004957 1.7e-80 303.1 204 73.0
Carub.0002s1448 Capsella rubella HOM05D003994 ORTHO05D004957 2.2e-80 302.8 205 71.7
Duzib052G1000 Durio zibethinus HOM05D003994 ORTHO05D004957 2.2e-80 302.8 204 73.5
Gohir.D01G159750 Gossypium hirsutum HOM05D003994 ORTHO05D004957 2.2e-80 302.8 204 73.5
Sed0021478 Sechium edule HOM05D003994 ORTHO05D004957 2.8e-80 302.4 209 69.9
TAR629G0599 Trochodendron aralioides HOM05D003994 ORTHO05D004957 2.8e-80 302.4 207 72.0
AT1G68000 Arabidopsis thaliana HOM05D003994 ORTHO05D004957 3.7e-80 302.0 205 71.2
BcaC03g14900 Brassica carinata HOM05D003994 ORTHO05D004957 4.9e-80 301.6 205 70.7
Lalb_Chr01g0001921 Lupinus albus HOM05D003994 ORTHO05D004957 4.9e-80 301.6 202 71.8
GSVIVG01024019001 Vitis vinifera HOM05D003994 ORTHO05D004957 4.9e-80 301.6 207 70.5
Potri.004G175600 Populus trichocarpa HOM05D003994 ORTHO05D004957 6.3e-80 301.2 206 71.8
Potri.009G135500 Populus trichocarpa HOM05D003994 ORTHO05D004957 6.3e-80 301.2 203 73.4
Aqoxy4G01712 Aquilegia oxysepala HOM05D003994 ORTHO05D004957 8.3e-80 300.8 208 69.7
COL.COLO4_17341 Corchorus olitorius HOM05D003994 ORTHO05D004957 1.1e-79 300.4 204 74.5
C06p37970 Brassica napus HOM05D003994 ORTHO05D004957 2.4e-79 299.3 205 70.7
Glyma.11G091200 Glycine max HOM05D003994 ORTHO05D004957 2.4e-79 299.3 202 71.8
Lalb_Chr03g0025191 Lupinus albus HOM05D003994 ORTHO05D004957 2.4e-79 299.3 202 73.3
Aqoxy1G00146 Aquilegia oxysepala HOM05D003994 ORTHO05D004957 3.1e-79 298.9 208 69.7
Phvul.011G036100 Phaseolus vulgaris HOM05D003994 ORTHO05D004957 3.1e-79 298.9 202 71.3
BcaC08g46004 Brassica carinata HOM05D003994 ORTHO05D004957 5.4e-79 298.1 205 70.7
BolC6t38896H Brassica oleracea HOM05D003994 ORTHO05D004957 1.2e-78 297.0 205 70.2
Lsat_1_v5_gn_5_108021 Lactuca sativa HOM05D003994 ORTHO05D004957 1.2e-78 297.0 188 76.6
Thecc.02G059800 Theobroma cacao HOM05D003994 ORTHO05D004957 1.2e-78 297.0 209 72.2
Dinv43046 Davidia involucrata HOM05D003225 ORTHO05D003818 1.6e-78 296.6 195 76.4
ClCG02G011950 Citrullus lanatus HOM05D003994 ORTHO05D004957 2.0e-78 296.2 235 64.3
Lalb_Chr19g0139051 Lupinus albus HOM05D003994 ORTHO05D004957 5.9e-78 294.7 203 71.4
PSO017G2109 Papaver somniferum HOM05D003994 ORTHO05D004957 1.7e-77 293.1 206 68.9
PSO675G5603 Papaver somniferum HOM05D003994 ORTHO05D004957 1.7e-77 293.1 206 68.9
Psat7g138440 Pisum sativum HOM05D003994 ORTHO05D004957 5.0e-77 291.6 202 69.3
vmacro17345 Vaccinium macrocarpon HOM05D003994 ORTHO05D004957 5.0e-77 291.6 187 76.5
QL11p050712 Quercus lobata HOM05D003994 ORTHO05D004957 6.6e-77 291.2 203 70.9
unitig_749.g13986 Utricularia gibba HOM05D003994 ORTHO05D004957 6.6e-77 291.2 187 73.3
Ca_19074_v3 Cicer arietinum L. HOM05D003994 ORTHO05D004957 1.1e-76 290.4 209 67.5
TPR.G39214 Trifolium pratense HOM05D003994 ORTHO05D004957 1.1e-76 290.4 202 68.8
TPR.G38794 Trifolium pratense HOM05D003994 ORTHO05D004957 1.5e-76 290.0 202 68.3
Medtr4g073020 Medicago truncatula HOM05D003994 ORTHO05D004957 2.5e-76 289.3 202 67.8
Carub.0007s0044 Capsella rubella HOM05D003994 ORTHO05D004957 9.5e-76 287.3 204 69.6
AUR62040162 Chenopodium quinoa HOM05D003994 ORTHO05D004957 1.4e-74 283.5 207 66.7
C03p77150 Brassica napus HOM05D003994 ORTHO05D004957 6.8e-74 281.2 185 74.1
C02p23750 Brassica napus HOM05D003994 ORTHO05D004957 3.4e-73 278.9 189 71.4
CARHR294300 Cardamine hirsuta HOM05D003994 ORTHO05D004957 4.4e-73 278.5 186 73.1
HPP92_004513 Vanilla planifolia HOM05D003994 ORTHO05D004957 5.7e-73 278.1 207 66.2
A02p14650 Brassica napus HOM05D003994 ORTHO05D004957 1.1e-71 273.9 192 70.3
BraA02t06532Z Brassica rapa HOM05D003994 ORTHO05D004957 1.1e-71 273.9 192 70.3
SGA_v2.0_scaffold243G44305 Striga asiatica HOM05D003994 ORTHO05D004957 1.8e-71 273.1 180 75.0
FAN24G3352 Fragaria x ananassa HOM05D003994 ORTHO05D004957 5.4e-71 271.6 211 64.5
VMungo1127G1708 Vigna mungo HOM05D003994 ORTHO05D004957 5.4e-71 271.6 187 68.4
MELO3C020821.2 Cucumis melo HOM05D003994 ORTHO05D004957 1.2e-70 270.4 208 64.4
FAN15G2236 Fragaria x ananassa HOM05D003994 ORTHO05D004957 1.6e-70 270.0 211 64.5
A07p34510 Brassica napus HOM05D003994 ORTHO05D004957 4.6e-70 268.5 187 71.7
Os02g0123600 Oryza sativa ssp. japonica HOM05D003994 ORTHO05D004957 1.0e-69 267.3 207 62.3
Sabra04G0117500 Salix brachista HOM05D003994 ORTHO05D004957 1.0e-69 267.3 207 64.3
Lj3g0010701 Lotus japonicus HOM05D003994 ORTHO05D004957 1.7e-69 266.5 189 67.7
Glyma.12G033500 Glycine max HOM05D003994 ORTHO05D004957 2.3e-69 266.2 185 69.2
ATR0307G066 Amborella trichopoda HOM05D003994 ORTHO05D004957 2.1e-67 259.6 209 65.1
FAN24G0721 Fragaria x ananassa HOM05D003994 ORTHO05D004957 2.8e-67 259.2 247 56.3
PGR142G1861 Punica granatum HOM05D003994 ORTHO05D004957 3.6e-67 258.8 209 63.6
arahy.Tifrunner.gnm1.ann1.VZUK08 Arachis hypogaea HOM05D003994 ORTHO05D004957 4.7e-67 258.5 214 64.0
Sabra09G0105200 Salix brachista HOM05D003994 ORTHO05D004957 6.2e-67 258.1 224 59.4
Zm00001eb274200 Zea mays HOM05D003994 ORTHO05D004957 1.4e-66 256.9 197 64.0
SalBow3G2361 Salvia bowleyana HOM05D003994 ORTHO05D004957 3.1e-66 255.8 218 62.8
CDE05G3005 Ceratophyllum demersum HOM05D003994 ORTHO05D004957 1.7e-64 250.0 208 65.4
Peaxi162Scf00045g00144 Petunia axillaris HOM05D003994 ORTHO05D004957 2.2e-64 249.6 207 61.8
EL10Ac7g18178 Beta vulgaris HOM05D003994 ORTHO05D004957 3.7e-64 248.8 207 60.9
arahy.Tifrunner.gnm1.ann1.L07Y4L Arachis hypogaea HOM05D003994 ORTHO05D004957 1.9e-63 246.5 207 62.8
SHI32381 Sapria himalayana HOM05D003994 ORTHO05D004957 1.7e-61 240.0 176 66.5
arahy.Tifrunner.gnm1.ann1.U045QQ Arachis hypogaea HOM05D003994 ORTHO05D004957 1.1e-58 230.7 158 73.4
Lj5C178T13 Lonicera japonica HOM05D003994 ORTHO05D004957 1.1e-58 230.7 143 79.0
MBI02_g21865_MAGBIO Magnolia biondii HOM05D003994 ORTHO05D004957 1.4e-58 230.3 207 60.4
Mapoly0071s0023 Marchantia polymorpha HOM05D003994 ORTHO05D004957 6.4e-56 221.5 198 60.1
SalBow5G5214 Salvia bowleyana HOM05D003994 ORTHO05D004957 1.2e-54 217.2 170 66.5
BolC6t39228H Brassica oleracea HOM05D000212 ORTHO05D005509 1.6e-54 216.9 152 73.7
CDE05G1389 Ceratophyllum demersum HOM05D003994 ORTHO05D004957 1.0e-53 214.2 208 59.1
C03p25490 Brassica napus HOM05D003994 ORTHO05D004957 8.6e-53 211.1 142 73.9
SMO112G0024 Selaginella moellendorffii HOM05D003994 ORTHO05D004957 1.9e-52 209.9 199 58.8
Zm00001eb389940 Zea mays HOM05D003994 ORTHO05D004957 7.3e-52 208.0 197 55.3
Pp3c4_10100 Physcomitrium patens HOM05D003994 ORTHO05D004957 1.6e-51 206.8 209 53.6
BolC3t19967H Brassica oleracea HOM05D003994 ORTHO05D004957 2.8e-51 206.1 187 58.8
Pp3c3_18340 Physcomitrium patens HOM05D003994 ORTHO05D004957 8.9e-50 201.1 209 51.7
Cpa.g.sc37.130 Carica papaya HOM05D003994 ORTHO05D004957 9.2e-47 191.0 133 72.9
CBR_g32608 Chara braunii HOM05D003994 ORTHO05D004957 2.7e-46 189.5 197 52.8
C06p42000 Brassica napus HOM05D000573 ORTHO05D005509 5.2e-42 175.3 182 58.2
Cre10.g419800 Chlamydomonas reinhardtii HOM05D003994 ORTHO05D004957 5.2e-42 175.3 152 57.9
FAN15G2231 Fragaria x ananassa HOM05D003994 ORTHO05D004957 3.4e-41 172.6 142 62.7
BcaC08g46226 Brassica carinata HOM05D003994 ORTHO05D004957 1.1e-39 167.5 113 74.3
PRCOL_00004558 Prasinoderma coloniale HOM05D003994 ORTHO05D004957 4.3e-36 155.6 155 52.9
MCO09G063 Micromonas commoda HOM05D003994 ORTHO05D004957 1.6e-35 153.7 149 54.4
MBI11_g13142_MAGBIO Magnolia biondii HOM05D003994 ORTHO05D004957 8.1e-35 151.4 232 41.4
arahy.Tifrunner.gnm1.ann1.8L0F4Y Arachis hypogaea HOM05D003994 ORTHO05D004957 1.5e-33 147.1 96 72.9
BcaNung05108 Brassica carinata HOM05D003994 ORTHO05D004957 7.1e-31 138.3 117 64.1
AL7G10460 Arabidopsis lyrata HOM05D003994 ORTHO05D004957 6.9e-26 121.7 87 66.7
FAN27G1783 Fragaria x ananassa HOM05D003994 ORTHO05D004957 1.5e-25 120.6 114 55.3
RcHm_v2.0_Chr5g0023251 Rosa chinensis HOM05D003994 ORTHO05D004957 9.9e-25 117.9 78 71.8
Cfa022653 Carpinus fangiana HOM05D003994 ORTHO05D004957 2.2e-24 116.7 157 40.8
arahy.Tifrunner.gnm1.ann1.NCR277 Arachis hypogaea HOM05D003994 ORTHO05D004957 6.4e-24 115.2 94 61.7
MD08G1201300 Malus domestica HOM05D003994 ORTHO05D036609 1.5e-17 94.0 70 61.4
MD16G1270800 Malus domestica HOM05D003994 ORTHO05D036609 3.2e-15 86.3 76 55.3
Pp3c10_9870 Physcomitrium patens HOM05D003994 ORTHO05D310819 4.3e-12 75.9 190 28.4
THA.LOC104807810 Tarenaya hassleriana HOM05D003994 ORTHO05D004957 4.1e-10 69.3 44 70.5
Os06g0492000 Oryza sativa ssp. japonica HOM05D003994 ORTHO05D036609 2.5e-07 60.1 40 62.5
MBI11_g33763_MAGBIO Magnolia biondii HOM05D003994 ORTHO05D004957 3.2e-07 59.7 54 59.3
arahy.Tifrunner.gnm1.ann1.B18QXV Arachis hypogaea HOM05D003994 ORTHO05D086742 2.7e-06 56.6 77 49.4
Cre03.g204751 Chlamydomonas reinhardtii HOM05D003994 ORTHO05D043992 7.9e-06 55.1 86 38.4


User provided reference genes

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