Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu061362.1 Olea europaea HOM05D005059 ORTHO05D004248 2.6e-43 178.3 90 100.0
Hma1.2p1_1016F.1_g248040 Hydrangea macrophylla HOM05D005059 ORTHO05D004248 1.0e-15 86.7 93 52.7
TAR624G0872 Trochodendron aralioides HOM05D005059 ORTHO05D004248 1.0e-15 86.7 93 49.5
TAR626G0600 Trochodendron aralioides HOM05D005059 ORTHO05D004248 1.5e-14 82.8 94 47.9
Dinv18371 Davidia involucrata HOM05D000126 ORTHO05D000085 4.3e-14 81.3 88 51.1
TAR627G0439 Trochodendron aralioides HOM05D005059 ORTHO05D004248 5.6e-14 80.9 94 46.8
Nn3g21078 Nelumbo nucifera HOM05D005059 ORTHO05D004248 1.2e-13 79.7 96 47.9
Aqoxy4G00224 Aquilegia oxysepala HOM05D005059 ORTHO05D004248 8.1e-13 77.0 88 43.2
Nn6g34461 Nelumbo nucifera HOM05D005059 ORTHO05D004248 1.1e-12 76.6 95 44.2
TAR624G0770 Trochodendron aralioides HOM05D005059 ORTHO05D004248 1.8e-12 75.9 89 47.2
Nitab4.5_0000788g0070 Nicotiana tabacum HOM05D005059 ORTHO05D004248 4.0e-12 74.7 90 47.8
CiPaw.09G073100 Carya illinoinensis HOM05D005059 ORTHO05D004248 1.5e-11 72.8 96 45.8
TAR629G2882 Trochodendron aralioides HOM05D005059 ORTHO05D004248 1.5e-11 72.8 79 50.6
Oeu043118.1 Olea europaea HOM05D005059 ORTHO05D004248 2.0e-11 72.4 85 44.7
Haze_06169 Corylus avellana HOM05D005059 ORTHO05D004248 2.6e-11 72.0 97 44.3
Hma1.2p1_0113F.1_g055120 Hydrangea macrophylla HOM05D005059 ORTHO05D004248 3.4e-11 71.6 92 41.3
MBI06_g16696_MAGBIO Magnolia biondii HOM05D005059 ORTHO05D004248 4.4e-11 71.2 87 41.4
Thecc.06G165400 Theobroma cacao HOM05D005059 ORTHO05D004248 7.6e-11 70.5 95 41.1
Lsat_1_v5_gn_7_25601 Lactuca sativa HOM05D005059 ORTHO05D004248 2.2e-10 68.9 86 44.2
Manes.16G042800 Manihot esculenta HOM05D005059 ORTHO05D004248 2.9e-10 68.6 97 40.2
CSS0038855 Camellia sinensis var. sinensis HOM05D005059 ORTHO05D004248 3.8e-10 68.2 90 43.3
QL05p049931 Quercus lobata HOM05D005059 ORTHO05D004248 3.8e-10 68.2 94 38.3
MBI07_g00460_MAGBIO Magnolia biondii HOM05D005059 ORTHO05D004248 6.4e-10 67.4 60 51.7
Rhsim04G0027000 Rhododendron simsii HOM05D002453 ORTHO05D008746 6.4e-10 67.4 62 48.4
CSS0004272 Camellia sinensis var. sinensis HOM05D005059 ORTHO05D004248 8.4e-10 67.0 92 44.6
Phvul.002G241108 Phaseolus vulgaris HOM05D005059 ORTHO05D004248 8.4e-10 67.0 97 44.3
Dinv15004 Davidia involucrata HOM05D005059 ORTHO05D004248 1.1e-09 66.6 74 45.9
Cfa000656 Carpinus fangiana HOM05D005059 ORTHO05D004248 1.4e-09 66.2 99 44.4
Dinv12752 Davidia involucrata HOM05D005059 ORTHO05D004248 1.4e-09 66.2 59 50.8
Manes.17G059300 Manihot esculenta HOM05D005059 ORTHO05D004248 1.4e-09 66.2 102 40.2
CAN.G411.50 Capsicum annuum HOM05D005059 ORTHO05D004248 1.9e-09 65.9 95 40.0
Ciclev10018148m.g Citrus clementina HOM05D005059 ORTHO05D004248 2.4e-09 65.5 92 43.5
Sabra04G0040600 Salix brachista HOM05D005059 ORTHO05D004248 2.4e-09 65.5 104 39.4
Glyma.08G118500 Glycine max HOM05D005059 ORTHO05D004248 3.2e-09 65.1 87 47.1
Oeu060173.1 Olea europaea HOM05D005059 ORTHO05D004248 3.2e-09 65.1 92 41.3
Oeu040922.1 Olea europaea HOM05D005059 ORTHO05D004248 4.2e-09 64.7 84 45.2
Sopen02g021130 Solanum pennellii HOM05D005059 ORTHO05D004248 4.2e-09 64.7 81 45.7
COL.COLO4_31233 Corchorus olitorius HOM05D005059 ORTHO05D004248 7.1e-09 63.9 100 39.0
PGSC0003DMG400028485 Solanum tuberosum HOM05D005059 ORTHO05D004248 7.1e-09 63.9 89 42.7
Actinidia18806 Actinidia chinensis HOM05D005059 ORTHO05D004248 1.2e-08 63.2 76 42.1
CSS0000215 Camellia sinensis var. sinensis HOM05D005059 ORTHO05D004248 1.2e-08 63.2 96 38.5
MSTRG.13233 Avicennia marina HOM05D005059 ORTHO05D004248 1.6e-08 62.8 87 41.4
Migut.H01411 Erythranthe guttata HOM05D005059 ORTHO05D004248 1.6e-08 62.8 58 55.2
Nitab4.5_0006663g0010 Nicotiana tabacum HOM05D005059 ORTHO05D004248 1.6e-08 62.8 88 42.0
Potri.004G061300 Populus trichocarpa HOM05D005059 ORTHO05D004248 1.6e-08 62.8 106 35.8
FvH4_3g07300 Fragaria vesca HOM05D005059 ORTHO05D004248 2.7e-08 62.0 101 40.6
Prupe.4G067000 Prunus persica HOM05D005059 ORTHO05D004248 2.7e-08 62.0 92 42.4
FAN21G0043 Fragaria x ananassa HOM05D005059 ORTHO05D004248 3.5e-08 61.6 101 40.6
FAN25G1124 Fragaria x ananassa HOM05D005059 ORTHO05D004248 3.5e-08 61.6 101 40.6
Gohir.A05G153400 Gossypium hirsutum HOM05D005059 ORTHO05D004248 3.5e-08 61.6 97 38.1
CSS0027903 Camellia sinensis var. sinensis HOM05D008890 ORTHO05D004248 4.6e-08 61.2 96 47.9
AT1G29290 Arabidopsis thaliana HOM05D005059 ORTHO05D004248 6.0e-08 60.8 71 43.7
FAN11G2282 Fragaria x ananassa HOM05D005059 ORTHO05D004248 6.0e-08 60.8 101 40.6
Lj4g0014521 Lotus japonicus HOM05D005059 ORTHO05D004248 6.0e-08 60.8 89 43.8
PGR042G3020 Punica granatum HOM05D005059 ORTHO05D004248 6.0e-08 60.8 91 39.6
Ca_17896_v3 Cicer arietinum L. HOM05D005059 ORTHO05D004248 7.8e-08 60.5 93 46.2
FAN16G0464 Fragaria x ananassa HOM05D005059 ORTHO05D004248 7.8e-08 60.5 101 39.6
Glyma.05G161100 Glycine max HOM05D005059 ORTHO05D004248 7.8e-08 60.5 59 52.5
Oeu060178.1 Olea europaea HOM05D005059 ORTHO05D004248 7.8e-08 60.5 95 36.8
RcHm_v2.0_Chr5g0011661 Rosa chinensis HOM05D005059 ORTHO05D004248 7.8e-08 60.5 102 38.2
SalBow7G3765 Salvia bowleyana HOM05D005059 ORTHO05D004248 7.8e-08 60.5 94 38.3
Thhalv10009585m.g Eutrema salsugineum HOM05D005059 ORTHO05D004248 1.3e-07 59.7 71 40.8
Hma1.2p1_0373F.1_g138420 Hydrangea macrophylla HOM05D005059 ORTHO05D004248 1.3e-07 59.7 60 48.3
MD00G1009200 Malus domestica HOM05D005059 ORTHO05D004248 1.3e-07 59.7 92 39.1
MD00G1221100 Malus domestica HOM05D005059 ORTHO05D004248 1.3e-07 59.7 92 39.1
MD10G1275500 Malus domestica HOM05D005059 ORTHO05D004248 1.3e-07 59.7 91 41.8
AL1G43080 Arabidopsis lyrata HOM05D005059 ORTHO05D004248 1.7e-07 59.3 69 44.9
Gohir.D05G156000 Gossypium hirsutum HOM05D005059 ORTHO05D004248 1.7e-07 59.3 97 37.1
Gorai.009G160500 Gossypium raimondii HOM05D005059 ORTHO05D004248 1.7e-07 59.3 97 37.1
Psat7g068640 Pisum sativum HOM05D005059 ORTHO05D004248 1.7e-07 59.3 94 41.5
DCAR_005145 Daucus carota HOM05D005059 ORTHO05D004248 3.0e-07 58.5 68 39.7
TWI53G1149 Tripterygium wilfordii HOM05D005059 ORTHO05D004248 3.9e-07 58.2 99 36.4
BcaB03g13892 Brassica carinata HOM05D005059 ORTHO05D004248 5.1e-07 57.8 71 40.8
Sed0013946 Sechium edule HOM05D005059 ORTHO05D004248 5.1e-07 57.8 90 40.0
Cc02_g15600 Coffea canephora HOM05D005059 ORTHO05D004248 6.6e-07 57.4 87 36.8
QL08p025461 Quercus lobata HOM05D008890 ORTHO05D004248 6.6e-07 57.4 89 39.3
Medtr8g087390 Medicago truncatula HOM05D005059 ORTHO05D004248 8.7e-07 57.0 55 56.4
BcaB07g32517 Brassica carinata HOM05D005059 ORTHO05D004248 1.1e-06 56.6 71 39.4
BraA08t35043Z Brassica rapa HOM05D009829 ORTHO05D012418 1.1e-06 56.6 93 40.9
CARHR028610 Cardamine hirsuta HOM05D005059 ORTHO05D004248 1.1e-06 56.6 71 40.8
Sp1g25220 Schrenkiella parvula HOM05D005059 ORTHO05D004248 1.1e-06 56.6 71 39.4
A09p37060 Brassica napus HOM05D005059 ORTHO05D004248 1.9e-06 55.8 71 38.0
BraA09t39221Z Brassica rapa HOM05D005059 ORTHO05D004248 1.9e-06 55.8 71 38.0
Potri.011G070500 Populus trichocarpa HOM05D005059 ORTHO05D004248 2.5e-06 55.5 73 39.7
Rhsim13G0187800 Rhododendron simsii HOM05D005059 ORTHO05D004248 2.5e-06 55.5 97 37.1
BcaC05g26955 Brassica carinata HOM05D005059 ORTHO05D004248 3.3e-06 55.1 71 38.0
C05p28050 Brassica napus HOM05D005059 ORTHO05D004248 3.3e-06 55.1 71 38.0
BolC5t31533H Brassica oleracea HOM05D005059 ORTHO05D004248 3.3e-06 55.1 71 38.0
Lsat_1_v5_gn_7_102441 Lactuca sativa HOM05D005059 ORTHO05D004248 3.3e-06 55.1 82 41.5
Phvul.006G173000 Phaseolus vulgaris HOM05D005059 ORTHO05D004248 3.3e-06 55.1 89 39.3
A07p10740 Brassica napus HOM05D005059 ORTHO05D004248 4.3e-06 54.7 71 39.4
BraA07t28869Z Brassica rapa HOM05D005059 ORTHO05D004248 4.3e-06 54.7 71 39.4
Lsat_1_v5_gn_7_102341 Lactuca sativa HOM05D005059 ORTHO05D004248 4.3e-06 54.7 91 42.9
Medtr2g016800 Medicago truncatula HOM05D005059 ORTHO05D004248 4.3e-06 54.7 94 37.2
PSO339G2616 Papaver somniferum HOM05D005059 ORTHO05D004248 4.3e-06 54.7 67 47.8
Thecc.07G128300 Theobroma cacao HOM05D008890 ORTHO05D004248 4.3e-06 54.7 90 31.1
TAR627G0061 Trochodendron aralioides HOM05D005059 ORTHO05D004248 4.3e-06 54.7 84 36.9
Carub.0001s2751 Capsella rubella HOM05D005059 ORTHO05D004248 5.6e-06 54.3 71 43.7
Sp1g15090 Schrenkiella parvula HOM05D009829 ORTHO05D012418 5.6e-06 54.3 88 38.6
Atru.chr10.1568 Acer truncatum HOM05D005059 ORTHO05D004248 7.3e-06 53.9 79 39.2
CiPaw.10G061800 Carya illinoinensis HOM05D005059 ORTHO05D004248 7.3e-06 53.9 99 39.4
SalBow8G0022 Salvia bowleyana HOM05D005059 ORTHO05D004248 7.3e-06 53.9 59 45.8
TPR.G6728 Trifolium pratense HOM05D005059 ORTHO05D004248 7.3e-06 53.9 56 51.8
BcaC07g38826 Brassica carinata HOM05D009829 ORTHO05D012418 9.6e-06 53.5 93 38.7
DCAR_027980 Daucus carota HOM05D005059 ORTHO05D004248 9.6e-06 53.5 72 38.9
Eucgr.D00466 Eucalyptus grandis HOM05D005059 ORTHO05D004248 9.6e-06 53.5 97 39.2


User provided reference genes

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