Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu061338.1 Olea europaea HOM05D006105 ORTHO05D006345 2.5e-124 448.7 216 100.0
Oeu059277.1 Olea europaea HOM05D006105 ORTHO05D006345 3.5e-46 189.1 220 51.8
Oeu005394.1 Olea europaea HOM05D006105 ORTHO05D006345 3.3e-44 182.6 201 54.7
MSTRG.14950 Avicennia marina HOM05D006105 ORTHO05D006345 1.6e-43 180.3 223 52.0
Hma1.2p1_0416F.1_g148610 Hydrangea macrophylla HOM05D006105 ORTHO05D006345 2.1e-43 179.9 225 50.2
Actinidia35226 Actinidia chinensis HOM05D006105 ORTHO05D006345 1.1e-42 177.6 226 46.9
Hma1.2p1_0688F.1_g203660 Hydrangea macrophylla HOM05D006105 ORTHO05D006345 5.2e-42 175.3 218 47.2
Cc05_g11450 Coffea canephora HOM05D006105 ORTHO05D006345 1.2e-41 174.1 226 48.2
Nitab4.5_0005445g0040 Nicotiana tabacum HOM05D006105 ORTHO05D006345 2.6e-41 172.9 224 49.6
Actinidia18787 Actinidia chinensis HOM05D006105 ORTHO05D006345 7.6e-41 171.4 226 46.9
CSS0004572 Camellia sinensis var. sinensis HOM05D006105 ORTHO05D006345 9.9e-41 171.0 222 47.7
CSS0026032 Camellia sinensis var. sinensis HOM05D006105 ORTHO05D006345 1.1e-39 167.5 219 47.5
Lj8A152T79 Lonicera japonica HOM05D006105 ORTHO05D006345 1.4e-39 167.2 228 47.8
Sopen12g005900 Solanum pennellii HOM05D006105 ORTHO05D006345 2.4e-39 166.4 223 47.1
Dinv14962 Davidia involucrata HOM05D006105 ORTHO05D006345 3.2e-39 166.0 167 53.3
CSS0022090 Camellia sinensis var. sinensis HOM05D006105 ORTHO05D006345 7.8e-38 161.4 229 46.7
Oeu051102.1 Olea europaea HOM05D006105 ORTHO05D006345 3.0e-37 159.5 126 69.0
MSTRG.14216 Avicennia marina HOM05D006105 ORTHO05D006345 1.5e-36 157.1 224 47.8
Prupe.4G171200 Prunus persica HOM05D006105 ORTHO05D006345 1.1e-34 151.0 218 45.0
GSVIVG01014239001 Vitis vinifera HOM05D006105 ORTHO05D006345 2.4e-34 149.8 230 44.8
PGSC0003DMG400015376 Solanum tuberosum HOM05D006105 ORTHO05D006345 3.1e-34 149.4 256 40.6
MD03G1238800 Malus domestica HOM05D006105 ORTHO05D006345 4.5e-33 145.6 221 43.9
HanXRQChr10g0304731 Helianthus annuus HOM05D006105 ORTHO05D006345 7.6e-33 144.8 215 47.0
Nitab4.5_0003202g0040 Nicotiana tabacum HOM05D006105 ORTHO05D006345 9.9e-33 144.4 213 47.4
QL08p027367 Quercus lobata HOM05D006105 ORTHO05D006345 3.8e-32 142.5 225 44.9
SGA_v2.0_scaffold73G24208 Striga asiatica HOM05D006105 ORTHO05D006345 5.4e-31 138.7 231 44.6
Haze_09360 Corylus avellana HOM05D006105 ORTHO05D006345 2.1e-30 136.7 225 42.2
Nitab4.5_0000246g0110 Nicotiana tabacum HOM05D006105 ORTHO05D006345 2.7e-30 136.3 219 44.3
HanXRQChr12g0372831 Helianthus annuus HOM05D006105 ORTHO05D006345 4.6e-30 135.6 212 42.9
Solyc07g062685.2 Solanum lycopersicum HOM05D006105 ORTHO05D006345 6.0e-30 135.2 217 42.9
Ciclev10010617m.g Citrus clementina HOM05D006105 ORTHO05D006345 1.0e-29 134.4 222 42.3
DCAR_019586 Daucus carota HOM05D006105 ORTHO05D006345 6.7e-29 131.7 221 41.6
ECA234G3938 Erigeron canadensis HOM05D006105 ORTHO05D006345 6.7e-29 131.7 217 42.9
DCAR_013141 Daucus carota HOM05D006105 ORTHO05D006345 8.7e-29 131.3 222 40.1
Peaxi162Scf00000g02515 Petunia axillaris HOM05D006105 ORTHO05D006345 1.1e-28 131.0 194 45.4
FvH4_3g18750 Fragaria vesca HOM05D006105 ORTHO05D006345 1.5e-28 130.6 217 40.6
Sopen07g030920 Solanum pennellii HOM05D006105 ORTHO05D006345 2.5e-28 129.8 217 43.3
FAN16G1829 Fragaria x ananassa HOM05D006105 ORTHO05D006345 3.3e-28 129.4 217 40.1
FAN21G1974 Fragaria x ananassa HOM05D006105 ORTHO05D006345 1.3e-27 127.5 216 39.4
FAN11G0448 Fragaria x ananassa HOM05D006105 ORTHO05D006345 3.6e-27 125.9 214 39.3
Gohir.A08G021700 Gossypium hirsutum HOM05D006105 ORTHO05D006345 3.6e-27 125.9 225 41.3
Thecc.07G103600 Theobroma cacao HOM05D006105 ORTHO05D006345 1.1e-26 124.4 229 42.8
Gorai.004G029900 Gossypium raimondii HOM05D006105 ORTHO05D006345 1.4e-26 124.0 225 41.8
Nitab4.5_0003077g0030 Nicotiana tabacum HOM05D006105 ORTHO05D006345 1.4e-26 124.0 179 45.3
RcHm_v2.0_Chr5g0031561 Rosa chinensis HOM05D006105 ORTHO05D006345 1.4e-26 124.0 225 40.4
FAN25G1303 Fragaria x ananassa HOM05D006105 ORTHO05D006345 2.4e-26 123.2 225 37.8
DCAR_024487 Daucus carota HOM05D006105 ORTHO05D006345 5.3e-26 122.1 222 38.3
Rhsim06G0204700 Rhododendron simsii HOM05D006105 ORTHO05D006345 5.3e-26 122.1 225 39.1
DCAR_021012 Daucus carota HOM05D006105 ORTHO05D006345 2.0e-25 120.2 216 38.9
Cfa019604 Carpinus fangiana HOM05D006105 ORTHO05D006345 5.8e-25 118.6 228 40.4
Gohir.D08G032500 Gossypium hirsutum HOM05D006105 ORTHO05D006345 1.3e-24 117.5 225 41.3
COL.COLO4_17616 Corchorus olitorius HOM05D006105 ORTHO05D006345 1.7e-24 117.1 228 42.5
Rhsim04G0024000 Rhododendron simsii HOM05D006105 ORTHO05D006345 1.7e-24 117.1 232 39.2
Nn1g09023 Nelumbo nucifera HOM05D006105 ORTHO05D006345 2.2e-24 116.7 227 38.3
TWI38G0440 Tripterygium wilfordii HOM05D006105 ORTHO05D006345 4.9e-24 115.5 222 40.1
TAR629G1657 Trochodendron aralioides HOM05D006105 ORTHO05D006345 6.4e-24 115.2 229 39.3
Cpa.g.sc131.73 Carica papaya HOM05D006105 ORTHO05D006345 4.2e-23 112.5 217 41.0
Dinv18338 Davidia involucrata HOM05D006105 ORTHO05D006345 4.2e-23 112.5 91 60.4
Peaxi162Scf00069g01930 Petunia axillaris HOM05D006105 ORTHO05D006345 5.5e-23 112.1 251 36.7
Lsat_1_v5_gn_5_129201 Lactuca sativa HOM05D006105 ORTHO05D006345 2.1e-22 110.2 194 42.8
SGA_v2.0_scaffold34G13768 Striga asiatica HOM05D006105 ORTHO05D006345 2.7e-22 109.8 225 40.9
PGSC0003DMG400012397 Solanum tuberosum HOM05D006105 ORTHO05D006345 6.0e-22 108.6 214 39.3
Duzib213G0100 Durio zibethinus HOM05D006105 ORTHO05D006345 7.9e-22 108.2 218 41.3
PGSC0003DMG400021273 Solanum tuberosum HOM05D006105 ORTHO05D006345 2.3e-21 106.7 224 42.9
Manes.03G103501 Manihot esculenta HOM05D006105 ORTHO05D006345 8.7e-21 104.8 221 39.4
Solyc12g014120.3 Solanum lycopersicum HOM05D006105 ORTHO05D006345 1.5e-20 104.0 91 57.1
Duzib268G0903 Durio zibethinus HOM05D006105 ORTHO05D006345 1.9e-20 103.6 221 40.3
PSO675G6909 Papaver somniferum HOM05D006105 ORTHO05D006345 5.6e-20 102.1 224 37.1
SalBow8G2605 Salvia bowleyana HOM05D006105 ORTHO05D006345 5.6e-20 102.1 216 38.0
SalBow7G2198 Salvia bowleyana HOM05D006105 ORTHO05D006345 7.4e-20 101.7 211 36.5
SalBow7G3373 Salvia bowleyana HOM05D006105 ORTHO05D006345 7.4e-20 101.7 211 36.5
MD11G1258600 Malus domestica HOM05D006105 ORTHO05D006345 3.7e-19 99.4 230 36.1
CiPaw.12G115300 Carya illinoinensis HOM05D006105 ORTHO05D006345 4.8e-19 99.0 224 37.5
Atru.chr2.2260 Acer truncatum HOM05D006105 ORTHO05D006345 6.2e-19 98.6 182 37.9
PSO541G5705 Papaver somniferum HOM05D006105 ORTHO05D006345 6.2e-19 98.6 224 36.6
ECA236G3415 Erigeron canadensis HOM05D006105 ORTHO05D006345 1.1e-18 97.8 207 37.2
AUR62019562 Chenopodium quinoa HOM05D006105 ORTHO05D006345 2.4e-18 96.7 230 33.0
Actinidia07497 Actinidia chinensis HOM05D006105 ORTHO05D006345 3.1e-18 96.3 190 40.5
Sc03g0010360 Simmondsia chinensis HOM05D006105 ORTHO05D006345 3.1e-18 96.3 142 45.8
Sopen10g003350 Solanum pennellii HOM05D016660 ORTHO05D006345 4.0e-18 95.9 207 39.6
AUR62037870 Chenopodium quinoa HOM05D006105 ORTHO05D006345 1.2e-17 94.4 192 37.0
Gorai.002G064700 Gossypium raimondii HOM05D006105 ORTHO05D006345 1.2e-17 94.4 220 37.3
TAR629G0423 Trochodendron aralioides HOM05D000109 ORTHO05D000965 1.5e-17 94.0 208 38.0
Gohir.D01G045100 Gossypium hirsutum HOM05D006105 ORTHO05D006345 5.8e-17 92.0 220 36.8
CiPaw.11G164300 Carya illinoinensis HOM05D006105 ORTHO05D006345 8.4e-16 88.2 174 39.7
TWI39G0145 Tripterygium wilfordii HOM05D006105 ORTHO05D006345 2.5e-15 86.7 229 34.9
arahy.Tifrunner.gnm1.ann1.KE6FEG Arachis hypogaea HOM05D006105 ORTHO05D006345 3.2e-15 86.3 221 32.1
Potri.001G375600 Populus trichocarpa HOM05D006105 ORTHO05D006345 2.7e-14 83.2 210 35.7
Lj3g0024128 Lotus japonicus HOM05D006105 ORTHO05D006345 4.6e-14 82.4 226 34.5
Phvul.005G068000 Phaseolus vulgaris HOM05D006105 ORTHO05D006345 7.9e-14 81.6 225 34.2
Migut.M00751 Erythranthe guttata HOM05D006105 ORTHO05D006345 1.0e-13 81.3 216 34.3
Aqoxy1G02199 Aquilegia oxysepala HOM05D006105 ORTHO05D006345 1.3e-13 80.9 222 35.1
Migut.H01972 Erythranthe guttata HOM05D006105 ORTHO05D006345 1.8e-13 80.5 178 38.2
MBI07_g17039_MAGBIO Magnolia biondii HOM05D006105 ORTHO05D006345 3.0e-13 79.7 220 33.2
Dinv17387 Davidia involucrata HOM05D006105 ORTHO05D006345 8.7e-13 78.2 216 35.6
arahy.Tifrunner.gnm1.ann1.LEI4AX Arachis hypogaea HOM05D006105 ORTHO05D006345 1.9e-12 77.0 232 29.3
VMungo1080G1877 Vigna mungo HOM05D006105 ORTHO05D006345 1.9e-12 77.0 225 32.4
ClCG07G009910 Citrullus lanatus HOM05D006105 ORTHO05D006345 3.3e-12 76.3 217 33.6
CsaV3_4G033280 Cucumis sativus L. HOM05D006105 ORTHO05D006345 3.3e-12 76.3 221 33.9
Sed0015488 Sechium edule HOM05D006105 ORTHO05D006345 3.3e-12 76.3 224 31.7
Lalb_Chr25g0286021 Lupinus albus HOM05D006105 ORTHO05D006345 4.3e-12 75.9 234 31.6
ClCG11G017660 Citrullus lanatus HOM05D006105 ORTHO05D006345 2.1e-11 73.6 223 33.6
Solyc10g007156.2 Solanum lycopersicum HOM05D016660 ORTHO05D006345 2.1e-11 73.6 182 35.2
Sed0005720 Sechium edule HOM05D006105 ORTHO05D006345 2.8e-11 73.2 228 33.8
VMungo1127G1756 Vigna mungo HOM05D006105 ORTHO05D006345 3.7e-11 72.8 225 32.9
Glyma.12G228100 Glycine max HOM05D006105 ORTHO05D006345 1.1e-10 71.2 226 34.5
MELO3C025628.2 Cucumis melo HOM05D006105 ORTHO05D006345 1.4e-10 70.9 234 33.3
arahy.Tifrunner.gnm1.ann1.TTJ9YL Arachis hypogaea HOM05D006105 ORTHO05D006345 2.4e-10 70.1 219 29.2
Medtr2g078220 Medicago truncatula HOM05D006105 ORTHO05D006345 3.1e-10 69.7 221 31.2
Ca_04016_v3 Cicer arietinum L. HOM05D006105 ORTHO05D006345 5.3e-10 68.9 224 30.4
Gohir.A13G148200 Gossypium hirsutum HOM05D006105 ORTHO05D006345 9.0e-10 68.2 92 44.6
Aqoxy4G00493 Aquilegia oxysepala HOM05D006105 ORTHO05D006345 2.2e-08 63.5 226 29.6
Eucgr.F01202 Eucalyptus grandis HOM05D006105 ORTHO05D006345 2.2e-08 63.5 77 50.6
Glyma.06G232600 Glycine max HOM05D006105 ORTHO05D006345 2.2e-08 63.5 216 30.1
Glyma.13G271900 Glycine max HOM05D006105 ORTHO05D006345 2.2e-08 63.5 230 31.7
TPR.G9213 Trifolium pratense HOM05D006105 ORTHO05D006345 2.2e-08 63.5 215 29.8
MELO3C016090.2 Cucumis melo HOM05D006105 ORTHO05D006345 5.0e-08 62.4 219 30.6
CsaV3_4G008420 Cucumis sativus L. HOM05D006105 ORTHO05D006345 1.1e-07 61.2 217 30.4
HanXRQChr17g0545011 Helianthus annuus HOM05D006105 ORTHO05D006345 1.4e-07 60.8 175 37.7
PGR083G1480 Punica granatum HOM05D006105 ORTHO05D006345 3.2e-07 59.7 223 31.4
Gohir.A01G059000 Gossypium hirsutum HOM05D006105 ORTHO05D006345 4.2e-07 59.3 65 47.7
unitig_747.g21582 Utricularia gibba HOM05D026394 ORTHO05D030051 5.5e-07 58.9 96 40.6
Manes.16G035200 Manihot esculenta HOM05D013066 ORTHO05D006345 1.2e-06 57.8 218 27.5
SGA_v2.0_scaffold130G34335 Striga asiatica HOM05D006105 ORTHO05D006345 1.6e-06 57.4 176 30.7


User provided reference genes

Program Settings