Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu061327.1 Olea europaea HOM05D006017 ORTHO05D007821 6.9e-312 1073.2 502 100.0
Oeu061328.1 Olea europaea HOM05D006017 ORTHO05D007821 6.9e-312 1073.2 502 100.0
MSTRG.14945 Avicennia marina HOM05D006017 ORTHO05D007821 5.0e-245 850.9 492 79.7
Dinv14956 Davidia involucrata HOM05D006017 ORTHO05D007821 4.2e-244 847.8 486 80.5
Hma1.2p1_0416F.1_g148570 Hydrangea macrophylla HOM05D006017 ORTHO05D007821 9.4e-244 846.7 488 79.7
CSS0036883 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 6.1e-243 844.0 493 79.7
Cc05_g11510 Coffea canephora HOM05D006017 ORTHO05D007821 2.6e-241 838.6 499 78.0
Solyc12g014100.2 Solanum lycopersicum HOM05D006017 ORTHO05D007821 1.3e-240 836.3 493 78.7
PGSC0003DMG400015330 Solanum tuberosum HOM05D006017 ORTHO05D007821 1.3e-240 836.3 493 78.7
Sopen12g005880 Solanum pennellii HOM05D006017 ORTHO05D007821 3.7e-240 834.7 493 78.3
Rhsim04G0023700 Rhododendron simsii HOM05D006017 ORTHO05D007821 2.4e-239 832.0 487 79.5
Actinidia18784 Actinidia chinensis HOM05D006017 ORTHO05D007821 9.1e-239 830.1 499 77.6
vmacro09508 Vaccinium macrocarpon HOM05D006017 ORTHO05D007821 9.1e-239 830.1 515 75.1
Cpa.g.sc131.80 Carica papaya HOM05D006017 ORTHO05D007821 7.7e-238 827.0 480 78.1
Migut.M00760 Erythranthe guttata HOM05D006017 ORTHO05D007821 2.9e-237 825.1 495 77.8
Peaxi162Scf00000g00262 Petunia axillaris HOM05D006017 ORTHO05D007821 3.8e-237 824.7 498 76.9
TWI38G0439 Tripterygium wilfordii HOM05D006017 ORTHO05D007821 1.4e-234 816.2 481 78.0
Cfa019614 Carpinus fangiana HOM05D006017 ORTHO05D007821 2.6e-233 812.0 495 76.4
GSVIVG01014248001 Vitis vinifera HOM05D006017 ORTHO05D007821 7.5e-233 810.4 498 75.1
Lj8A152T86 Lonicera japonica HOM05D006017 ORTHO05D007821 9.8e-233 810.1 487 77.2
CiPaw.12G115700 Carya illinoinensis HOM05D006017 ORTHO05D007821 2.2e-232 808.9 488 76.4
Prupe.4G172100 Prunus persica HOM05D006017 ORTHO05D007821 1.4e-231 806.2 486 75.9
Manes.03G103900 Manihot esculenta HOM05D006017 ORTHO05D007821 5.4e-231 804.3 479 76.8
Atru.chr2.2344 Acer truncatum HOM05D006017 ORTHO05D007821 7.0e-231 803.9 494 76.1
Gorai.002G065000 Gossypium raimondii HOM05D006017 ORTHO05D007821 1.2e-230 803.1 485 75.9
DCAR_028453 Daucus carota HOM05D006017 ORTHO05D007821 1.6e-230 802.7 480 77.9
CAN.G739.4 Capsicum annuum HOM05D006017 ORTHO05D007821 2.0e-230 802.4 527 72.3
Haze_09368 Corylus avellana HOM05D006017 ORTHO05D007821 3.5e-230 801.6 512 73.8
CiPaw.11G165400 Carya illinoinensis HOM05D006017 ORTHO05D007821 4.5e-230 801.2 483 76.4
Eucgr.F01184 Eucalyptus grandis HOM05D006017 ORTHO05D007821 4.5e-230 801.2 491 75.8
Gohir.D01G045400 Gossypium hirsutum HOM05D006017 ORTHO05D007821 4.5e-230 801.2 485 75.7
Gohir.A01G059400 Gossypium hirsutum HOM05D006017 ORTHO05D007821 5.9e-230 800.8 485 75.9
MBI07_g06432_MAGBIO Magnolia biondii HOM05D006017 ORTHO05D007821 5.9e-230 800.8 474 77.2
Sc03g0010290 Simmondsia chinensis HOM05D006017 ORTHO05D007821 1.0e-229 800.0 491 74.3
Eucgr.F01185 Eucalyptus grandis HOM05D006017 ORTHO05D007821 2.9e-229 798.5 491 75.8
ECA240G4517 Erigeron canadensis HOM05D006017 ORTHO05D007821 3.8e-229 798.1 497 74.0
RcHm_v2.0_Chr5g0031821 Rosa chinensis HOM05D006017 ORTHO05D007821 3.8e-229 798.1 492 74.0
ClCG07G009900 Citrullus lanatus HOM05D006017 ORTHO05D007821 8.6e-229 797.0 474 77.0
Sed0020976 Sechium edule HOM05D006017 ORTHO05D007821 2.5e-228 795.4 473 77.2
FAN16G2700 Fragaria x ananassa HOM05D006017 ORTHO05D007821 5.5e-228 794.3 483 74.9
FAN11G3087 Fragaria x ananassa HOM05D006017 ORTHO05D007821 7.2e-228 793.9 492 74.0
PGR083G0123 Punica granatum HOM05D006017 ORTHO05D007821 1.2e-227 793.1 498 74.5
Lsat_1_v5_gn_9_98620 Lactuca sativa HOM05D006017 ORTHO05D007821 2.1e-227 792.3 477 76.1
CANSAT35G1773 Cannabis sativa HOM05D006017 ORTHO05D007821 2.8e-227 792.0 477 76.9
CsaV3_4G008430 Cucumis sativus L. HOM05D006017 ORTHO05D007821 6.1e-227 790.8 474 76.6
HanXRQChr03g0070991 Helianthus annuus HOM05D006017 ORTHO05D007821 6.1e-227 790.8 489 76.1
Thecc.07G102400 Theobroma cacao HOM05D006017 ORTHO05D007821 1.0e-226 790.0 471 76.9
MELO3C016089.2 Cucumis melo HOM05D006017 ORTHO05D007821 1.4e-226 789.6 474 76.6
QL08p027671 Quercus lobata HOM05D006017 ORTHO05D007821 3.0e-226 788.5 490 74.5
EL10Ac4g08290 Beta vulgaris HOM05D006017 ORTHO05D007821 1.5e-225 786.2 474 75.5
Nitab4.5_0003077g0020 Nicotiana tabacum HOM05D006017 ORTHO05D007821 3.7e-224 781.6 507 73.8
Aqoxy1G02214 Aquilegia oxysepala HOM05D006017 ORTHO05D007821 2.4e-223 778.9 483 74.1
AUR62019513 Chenopodium quinoa HOM05D006017 ORTHO05D007821 2.0e-222 775.8 484 73.8
PSO541G6385 Papaver somniferum HOM05D006017 ORTHO05D007821 2.7e-222 775.4 481 73.6
ATR0749G089 Amborella trichopoda HOM05D006017 ORTHO05D007821 4.5e-222 774.6 481 73.4
Glyma.12G158600 Glycine max HOM05D006017 ORTHO05D007821 4.5e-222 774.6 479 73.9
FAN21G1753 Fragaria x ananassa HOM05D006017 ORTHO05D007821 1.0e-221 773.5 512 70.5
Lj3g0015312 Lotus japonicus HOM05D006017 ORTHO05D007821 1.0e-221 773.5 467 75.4
AL8G29200 Arabidopsis lyrata HOM05D006017 ORTHO05D007821 6.6e-221 770.8 468 75.4
Lalb_Chr03g0030841 Lupinus albus HOM05D006017 ORTHO05D007821 2.5e-220 768.8 469 74.4
Carub.0008s1436 Capsella rubella HOM05D006017 ORTHO05D007821 3.3e-220 768.5 468 74.6
THA.LOC104811882 Tarenaya hassleriana HOM05D006017 ORTHO05D007821 3.3e-220 768.5 468 75.4
Aa31LG3G9950 Aethionema arabicum HOM05D006017 ORTHO05D007821 1.2e-219 766.5 468 74.8
Medtr8g463280 Medicago truncatula HOM05D006017 ORTHO05D007821 1.2e-219 766.5 468 74.4
CARHR267270 Cardamine hirsuta HOM05D006017 ORTHO05D007821 1.6e-219 766.1 468 74.8
PSO675G4947 Papaver somniferum HOM05D006017 ORTHO05D007821 1.6e-219 766.1 489 72.2
BcaB05g22107 Brassica carinata HOM05D006017 ORTHO05D007821 2.1e-219 765.8 469 74.8
Ca_23058_v3 Cicer arietinum L. HOM05D006017 ORTHO05D007821 2.1e-219 765.8 468 74.8
Ca_30664_v3 Cicer arietinum L. HOM05D006017 ORTHO05D007821 2.1e-219 765.8 468 74.8
C02p17670 Brassica napus HOM05D006017 ORTHO05D007821 2.8e-219 765.4 469 74.4
Phvul.011G148800 Phaseolus vulgaris HOM05D006017 ORTHO05D007821 6.1e-219 764.2 474 73.6
Sp6g16110 Schrenkiella parvula HOM05D006017 ORTHO05D007821 6.1e-219 764.2 468 74.8
AT5G54080 Arabidopsis thaliana HOM05D006017 ORTHO05D007821 1.4e-218 763.1 468 74.8
A02p10590 Brassica napus HOM05D006017 ORTHO05D007821 3.0e-218 761.9 469 74.2
BraA02t06124Z Brassica rapa HOM05D006017 ORTHO05D007821 3.0e-218 761.9 469 74.2
Potri.001G374100 Populus trichocarpa HOM05D006017 ORTHO05D007821 3.0e-218 761.9 479 74.5
Psat4g138640 Pisum sativum HOM05D006017 ORTHO05D007821 4.0e-218 761.5 467 74.7
BcaC03g14354 Brassica carinata HOM05D006017 ORTHO05D007821 3.4e-217 758.4 469 74.0
BolC2t07897H Brassica oleracea HOM05D006017 ORTHO05D007821 7.5e-217 757.3 469 73.8
Sabra16G0246500 Salix brachista HOM05D006017 ORTHO05D007821 9.8e-217 756.9 477 74.2
arahy.Tifrunner.gnm1.ann1.DSNA77 Arachis hypogaea HOM05D006017 ORTHO05D007821 2.2e-216 755.7 484 71.1
arahy.Tifrunner.gnm1.ann1.FV2XB3 Arachis hypogaea HOM05D006017 ORTHO05D007821 2.2e-216 755.7 489 70.6
SGA_v2.0_scaffold73G24213 Striga asiatica HOM05D006017 ORTHO05D007821 2.9e-216 755.4 527 68.7
VMungo1127G0952 Vigna mungo HOM05D006017 ORTHO05D007821 2.4e-215 752.3 468 73.1
AUR62036125 Chenopodium quinoa HOM05D006017 ORTHO05D007821 3.2e-215 751.9 481 71.9
unitig_46.g18314 Utricularia gibba HOM05D006017 ORTHO05D007821 4.1e-215 751.5 490 71.6
HPP92_003902 Vanilla planifolia HOM05D006017 ORTHO05D007821 8.9e-210 733.8 475 70.5
CDE02G3882 Ceratophyllum demersum HOM05D006017 ORTHO05D007821 1.7e-205 719.5 483 69.2
Os06g0103300 Oryza sativa ssp. japonica HOM05D006017 ORTHO05D007821 3.9e-205 718.4 479 69.9
Zm00001eb379510 Zea mays HOM05D006017 ORTHO05D007821 1.1e-202 710.3 491 67.6
Nn1g04303 Nelumbo nucifera HOM05D006017 ORTHO05D007821 1.5e-201 706.4 415 78.1
Ciclev10008509m.g Citrus clementina HOM05D006017 ORTHO05D007821 2.0e-201 706.1 416 78.1
Ah.04g164440 Amaranthus hybridus HOM05D006017 ORTHO05D007821 1.9e-199 699.5 473 68.9
Hund22764 Selenicereus undatus HOM05D006017 ORTHO05D007821 1.4e-191 673.3 433 71.1
Mapoly0078s0002 Marchantia polymorpha HOM05D006017 ORTHO05D007821 2.3e-189 666.0 470 65.5
Duzib170G0488 Durio zibethinus HOM05D006017 ORTHO05D007821 1.5e-185 653.3 490 64.3
Pp3c16_940 Physcomitrium patens HOM05D006017 ORTHO05D007821 3.4e-185 652.1 484 63.6
AagrBONN_evm.TU.Sc2ySwM_228.2578 Anthoceros agrestis HOM05D006017 ORTHO05D007821 4.2e-183 645.2 457 64.8
Nitab4.5_0005445g0020 Nicotiana tabacum HOM05D006017 ORTHO05D007821 5.4e-183 644.8 452 69.2
Thhalv10013691m.g Eutrema salsugineum HOM05D006017 ORTHO05D007821 7.3e-180 634.4 469 64.6
Hma1.2p1_0416F.1_g148580 Hydrangea macrophylla HOM05D006017 ORTHO05D007821 4.3e-172 608.6 309 87.4
SMO119G0176 Selaginella moellendorffii HOM05D006017 ORTHO05D007821 2.8e-171 605.9 471 60.5
FvH4_3g19020 Fragaria vesca HOM05D006017 ORTHO05D007821 3.3e-164 582.4 322 80.4
SalBow8G4076 Salvia bowleyana HOM05D006017 ORTHO05D007821 7.4e-164 581.3 308 84.7
Cre02.g091200 Chlamydomonas reinhardtii HOM05D006017 ORTHO05D007821 4.8e-155 552.0 479 56.6
MD03G1237500 Malus domestica HOM05D006017 ORTHO05D007821 1.2e-153 547.4 297 82.2
PRCOL_00000185 Prasinoderma coloniale HOM05D006017 ORTHO05D007821 1.9e-151 540.0 491 54.8
TPR.G22540 Trifolium pratense HOM05D006017 ORTHO05D007821 4.6e-150 535.4 412 63.3
Glyma.06G234200 Glycine max HOM05D006017 ORTHO05D007821 1.9e-127 460.3 305 70.2
Oeu061326.1 Olea europaea HOM05D006017 ORTHO05D007821 7.8e-81 305.4 146 99.3
CSS0003418 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 2.3e-80 303.9 189 76.2
MD03G1237300 Malus domestica HOM05D006017 ORTHO05D007821 5.3e-69 266.2 206 63.1
FAN25G2436 Fragaria x ananassa HOM05D006017 ORTHO05D007821 6.9e-69 265.8 132 85.6
SEGI_01915 Sequoiadendron giganteum HOM05D006017 ORTHO05D007821 4.9e-67 259.6 214 57.9
Rhsim07G0153900 Rhododendron simsii HOM05D006017 ORTHO05D000252 3.5e-65 253.4 234 54.7
Glyma.06G234050 Glycine max HOM05D006017 ORTHO05D007821 8.7e-64 248.8 133 82.7
TAR436G0001 Trochodendron aralioides HOM05D006017 ORTHO05D007821 3.3e-63 246.9 136 80.9
Nitab4.5_0004022g0010 Nicotiana tabacum HOM05D006017 ORTHO05D007821 8.1e-62 242.3 120 90.0
BcaC04g20394 Brassica carinata HOM05D006017 ORTHO05D007821 4.5e-60 236.5 401 39.7
C09p44170 Brassica napus HOM05D006017 ORTHO05D017343 7.9e-57 225.7 252 50.8
TWI38G1497 Tripterygium wilfordii HOM05D006017 ORTHO05D007821 2.5e-47 194.1 119 74.8
CSS0021316 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 5.8e-44 183.0 160 56.9
A10p11370 Brassica napus HOM05D006017 ORTHO05D007821 9.3e-42 175.6 283 41.3
SEGI_25954 Sequoiadendron giganteum HOM05D006017 ORTHO05D007821 1.3e-30 138.7 93 66.7
FAN25G2983 Fragaria x ananassa HOM05D006017 ORTHO05D007821 3.9e-24 117.1 105 52.4
TWI38G0821 Tripterygium wilfordii HOM05D006017 ORTHO05D413584 1.1e-21 109.0 62 80.6
arahy.Tifrunner.gnm1.ann1.EZ2Q4B Arachis hypogaea HOM05D006004 ORTHO05D006976 1.8e-21 108.2 61 77.0
SEGI_23248 Sequoiadendron giganteum HOM05D006017 ORTHO05D007821 2.4e-21 107.8 77 61.0
CSS0031230 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 3.6e-17 94.0 141 40.4
BolC9t57289H Brassica oleracea HOM05D006017 ORTHO05D104628 1.8e-16 91.7 217 30.9
BraA10t43231Z Brassica rapa HOM05D006017 ORTHO05D017343 2.6e-15 87.8 68 60.3
HPP92_003866 Vanilla planifolia HOM05D006017 ORTHO05D007821 5.5e-10 70.1 54 63.0
Mapoly0432s0001 Marchantia polymorpha HOM05D019566 ORTHO05D017343 8.8e-08 62.8 43 62.8


User provided reference genes

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