Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu061326.1 Olea europaea HOM05D006017 ORTHO05D007821 2.1e-82 308.9 147 100.0
Oeu061327.1 Olea europaea HOM05D006017 ORTHO05D007821 7.9e-82 307.0 146 99.3
Oeu061328.1 Olea europaea HOM05D006017 ORTHO05D007821 7.9e-82 307.0 146 99.3
MSTRG.14945 Avicennia marina HOM05D006017 ORTHO05D007821 6.2e-71 270.8 146 84.2
Dinv14956 Davidia involucrata HOM05D006017 ORTHO05D007821 1.5e-69 266.2 136 88.2
PGSC0003DMG400015330 Solanum tuberosum HOM05D006017 ORTHO05D007821 1.5e-69 266.2 143 83.9
Solyc12g014100.2 Solanum lycopersicum HOM05D006017 ORTHO05D007821 3.4e-69 265.0 143 83.2
Sopen12g005880 Solanum pennellii HOM05D006017 ORTHO05D007821 3.4e-69 265.0 143 83.2
CSS0036883 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 1.3e-68 263.1 140 85.7
Rhsim04G0023700 Rhododendron simsii HOM05D006017 ORTHO05D007821 2.9e-68 261.9 140 84.3
Peaxi162Scf00000g00262 Petunia axillaris HOM05D006017 ORTHO05D007821 1.4e-67 259.6 146 80.8
vmacro09508 Vaccinium macrocarpon HOM05D006017 ORTHO05D007821 3.2e-67 258.5 146 79.5
Nn1g04303 Nelumbo nucifera HOM05D006017 ORTHO05D007821 7.1e-67 257.3 135 85.9
Migut.M00760 Erythranthe guttata HOM05D006017 ORTHO05D007821 9.3e-67 256.9 146 79.5
Actinidia18784 Actinidia chinensis HOM05D006017 ORTHO05D007821 1.2e-66 256.5 146 80.8
SGA_v2.0_scaffold73G24213 Striga asiatica HOM05D006017 ORTHO05D007821 1.2e-66 256.5 137 84.7
CiPaw.12G115700 Carya illinoinensis HOM05D006017 ORTHO05D007821 2.1e-66 255.8 137 83.2
CiPaw.11G165400 Carya illinoinensis HOM05D006017 ORTHO05D007821 4.6e-66 254.6 148 79.7
Hma1.2p1_0416F.1_g148570 Hydrangea macrophylla HOM05D006017 ORTHO05D007821 6.0e-66 254.2 135 85.9
Haze_09368 Corylus avellana HOM05D006017 ORTHO05D007821 1.3e-65 253.1 137 82.5
Sc03g0010290 Simmondsia chinensis HOM05D006017 ORTHO05D007821 1.3e-65 253.1 141 80.1
Cpa.g.sc131.80 Carica papaya HOM05D006017 ORTHO05D007821 3.0e-65 251.9 135 82.2
Cc05_g11510 Coffea canephora HOM05D006017 ORTHO05D007821 5.1e-65 251.1 149 77.9
MBI07_g06432_MAGBIO Magnolia biondii HOM05D006017 ORTHO05D007821 1.1e-64 250.0 136 81.6
Cfa019614 Carpinus fangiana HOM05D006017 ORTHO05D007821 1.9e-64 249.2 137 81.8
AL8G29200 Arabidopsis lyrata HOM05D006017 ORTHO05D007821 2.5e-64 248.8 132 84.1
Carub.0008s1436 Capsella rubella HOM05D006017 ORTHO05D007821 4.3e-64 248.1 132 83.3
Lj8A152T86 Lonicera japonica HOM05D006017 ORTHO05D007821 4.3e-64 248.1 132 84.8
TAR436G0001 Trochodendron aralioides HOM05D006017 ORTHO05D007821 4.3e-64 248.1 136 80.9
GSVIVG01014248001 Vitis vinifera HOM05D006017 ORTHO05D007821 4.3e-64 248.1 148 76.4
Thhalv10013691m.g Eutrema salsugineum HOM05D006017 ORTHO05D007821 5.7e-64 247.7 133 83.5
AT5G54080 Arabidopsis thaliana HOM05D006017 ORTHO05D007821 7.4e-64 247.3 132 84.1
AUR62019513 Chenopodium quinoa HOM05D006017 ORTHO05D007821 7.4e-64 247.3 142 76.8
AUR62036125 Chenopodium quinoa HOM05D006017 ORTHO05D007821 1.3e-63 246.5 136 78.7
Eucgr.F01184 Eucalyptus grandis HOM05D006017 ORTHO05D007821 1.3e-63 246.5 141 78.0
Sp6g16110 Schrenkiella parvula HOM05D006017 ORTHO05D007821 1.3e-63 246.5 132 84.1
THA.LOC104811882 Tarenaya hassleriana HOM05D006017 ORTHO05D007821 1.3e-63 246.5 132 83.3
Atru.chr2.2344 Acer truncatum HOM05D006017 ORTHO05D007821 2.2e-63 245.7 144 80.6
Ciclev10008509m.g Citrus clementina HOM05D006017 ORTHO05D007821 2.2e-63 245.7 133 82.7
TWI38G0439 Tripterygium wilfordii HOM05D006017 ORTHO05D007821 2.2e-63 245.7 132 84.8
CARHR267270 Cardamine hirsuta HOM05D006017 ORTHO05D007821 2.8e-63 245.4 132 83.3
C02p17670 Brassica napus HOM05D006017 ORTHO05D007821 4.8e-63 244.6 133 82.7
Eucgr.F01185 Eucalyptus grandis HOM05D006017 ORTHO05D007821 4.8e-63 244.6 141 78.0
Gohir.A01G059400 Gossypium hirsutum HOM05D006017 ORTHO05D007821 4.8e-63 244.6 135 81.5
Aa31LG3G9950 Aethionema arabicum HOM05D006017 ORTHO05D007821 6.3e-63 244.2 132 83.3
BcaB05g22107 Brassica carinata HOM05D006017 ORTHO05D007821 1.1e-62 243.4 133 82.7
BcaC03g14354 Brassica carinata HOM05D006017 ORTHO05D007821 1.1e-62 243.4 133 82.7
BolC2t07897H Brassica oleracea HOM05D006017 ORTHO05D007821 1.1e-62 243.4 133 82.7
Thecc.07G102400 Theobroma cacao HOM05D006017 ORTHO05D007821 1.1e-62 243.4 135 81.5
Sed0020976 Sechium edule HOM05D006017 ORTHO05D007821 1.4e-62 243.0 135 80.0
DCAR_028453 Daucus carota HOM05D006017 ORTHO05D007821 1.8e-62 242.7 131 84.0
Ah.04g164440 Amaranthus hybridus HOM05D006017 ORTHO05D007821 2.4e-62 242.3 138 78.3
Lsat_1_v5_gn_9_98620 Lactuca sativa HOM05D006017 ORTHO05D007821 2.4e-62 242.3 142 77.5
PSO675G4947 Papaver somniferum HOM05D006017 ORTHO05D007821 2.4e-62 242.3 132 82.6
PSO541G6385 Papaver somniferum HOM05D006017 ORTHO05D007821 3.1e-62 241.9 132 81.8
A02p10590 Brassica napus HOM05D006017 ORTHO05D007821 4.1e-62 241.5 133 82.0
BraA02t06124Z Brassica rapa HOM05D006017 ORTHO05D007821 4.1e-62 241.5 133 82.0
Gorai.002G065000 Gossypium raimondii HOM05D006017 ORTHO05D007821 4.1e-62 241.5 135 80.0
RcHm_v2.0_Chr5g0031821 Rosa chinensis HOM05D006017 ORTHO05D007821 4.1e-62 241.5 142 76.8
EL10Ac4g08290 Beta vulgaris HOM05D006017 ORTHO05D007821 5.3e-62 241.1 135 77.8
Manes.03G103900 Manihot esculenta HOM05D006017 ORTHO05D007821 5.3e-62 241.1 143 76.9
ECA240G4517 Erigeron canadensis HOM05D006017 ORTHO05D007821 6.9e-62 240.7 147 74.1
Gohir.D01G045400 Gossypium hirsutum HOM05D006017 ORTHO05D007821 1.2e-61 240.0 135 79.3
Aqoxy1G02214 Aquilegia oxysepala HOM05D006017 ORTHO05D007821 1.5e-61 239.6 132 81.1
FAN11G3087 Fragaria x ananassa HOM05D006017 ORTHO05D007821 2.0e-61 239.2 142 77.5
PGR083G0123 Punica granatum HOM05D006017 ORTHO05D007821 2.0e-61 239.2 142 77.5
ATR0749G089 Amborella trichopoda HOM05D006017 ORTHO05D007821 2.6e-61 238.8 133 78.9
CDE02G3882 Ceratophyllum demersum HOM05D006017 ORTHO05D007821 4.5e-61 238.0 136 76.5
unitig_46.g18314 Utricularia gibba HOM05D006017 ORTHO05D007821 5.9e-61 237.7 142 76.8
CAN.G739.4 Capsicum annuum HOM05D006017 ORTHO05D007821 1.0e-60 236.9 172 66.3
MD03G1237300 Malus domestica HOM05D006017 ORTHO05D007821 1.0e-60 236.9 144 75.7
FAN16G2700 Fragaria x ananassa HOM05D006017 ORTHO05D007821 1.7e-60 236.1 133 80.5
FAN21G1753 Fragaria x ananassa HOM05D006017 ORTHO05D007821 2.9e-60 235.3 133 79.7
ClCG07G009900 Citrullus lanatus HOM05D006017 ORTHO05D007821 5.0e-60 234.6 136 75.7
Prupe.4G172100 Prunus persica HOM05D006017 ORTHO05D007821 6.5e-60 234.2 133 78.9
CsaV3_4G008430 Cucumis sativus L. HOM05D006017 ORTHO05D007821 8.5e-60 233.8 136 75.7
Ca_23058_v3 Cicer arietinum L. HOM05D006017 ORTHO05D007821 5.5e-59 231.1 132 77.3
Ca_30664_v3 Cicer arietinum L. HOM05D006017 ORTHO05D007821 5.5e-59 231.1 132 77.3
Medtr8g463280 Medicago truncatula HOM05D006017 ORTHO05D007821 7.2e-59 230.7 132 75.8
SEGI_01915 Sequoiadendron giganteum HOM05D006017 ORTHO05D007821 9.4e-59 230.3 131 77.1
MELO3C016089.2 Cucumis melo HOM05D006017 ORTHO05D007821 1.6e-58 229.6 136 75.0
HanXRQChr03g0070991 Helianthus annuus HOM05D006017 ORTHO05D007821 1.6e-58 229.6 140 75.0
Lj3g0015312 Lotus japonicus HOM05D006017 ORTHO05D007821 1.0e-57 226.9 132 76.5
Glyma.12G158600 Glycine max HOM05D006017 ORTHO05D007821 1.8e-57 226.1 129 77.5
CANSAT35G1773 Cannabis sativa HOM05D006017 ORTHO05D007821 2.3e-57 225.7 132 76.5
Psat4g138640 Pisum sativum HOM05D006017 ORTHO05D007821 3.9e-57 224.9 132 75.8
TPR.G22540 Trifolium pratense HOM05D006017 ORTHO05D007821 6.7e-57 224.2 132 75.0
Glyma.06G234200 Glycine max HOM05D006017 ORTHO05D007821 1.9e-56 222.6 127 77.2
Sabra16G0246500 Salix brachista HOM05D006017 ORTHO05D007821 1.9e-56 222.6 141 74.5
Phvul.011G148800 Phaseolus vulgaris HOM05D006017 ORTHO05D007821 3.3e-56 221.9 138 71.7
arahy.Tifrunner.gnm1.ann1.DSNA77 Arachis hypogaea HOM05D006017 ORTHO05D007821 4.3e-56 221.5 132 72.7
QL08p027671 Quercus lobata HOM05D006017 ORTHO05D007821 9.7e-56 220.3 141 72.3
arahy.Tifrunner.gnm1.ann1.FV2XB3 Arachis hypogaea HOM05D006017 ORTHO05D007821 1.7e-55 219.5 137 70.1
HPP92_003902 Vanilla planifolia HOM05D006017 ORTHO05D007821 1.7e-55 219.5 132 72.0
VMungo1127G0952 Vigna mungo HOM05D006017 ORTHO05D007821 2.2e-55 219.2 132 72.7
Potri.001G374100 Populus trichocarpa HOM05D006017 ORTHO05D007821 2.8e-55 218.8 141 73.8
Lalb_Chr03g0030841 Lupinus albus HOM05D006017 ORTHO05D007821 1.8e-54 216.1 133 72.2
AagrBONN_evm.TU.Sc2ySwM_228.2578 Anthoceros agrestis HOM05D006017 ORTHO05D007821 1.5e-53 213.0 133 69.2
Mapoly0078s0002 Marchantia polymorpha HOM05D006017 ORTHO05D007821 1.5e-53 213.0 134 70.1
Nitab4.5_0003077g0020 Nicotiana tabacum HOM05D006017 ORTHO05D007821 5.9e-53 211.1 115 82.6
Pp3c16_940 Physcomitrium patens HOM05D006017 ORTHO05D007821 1.4e-51 206.5 146 66.4
Zm00001eb379510 Zea mays HOM05D006017 ORTHO05D007821 9.4e-51 203.8 142 64.8
Os06g0103300 Oryza sativa ssp. japonica HOM05D006017 ORTHO05D007821 2.0e-48 196.1 133 66.9
SMO119G0176 Selaginella moellendorffii HOM05D006017 ORTHO05D007821 5.0e-44 181.4 132 61.4
Cre02.g091200 Chlamydomonas reinhardtii HOM05D006017 ORTHO05D007821 1.6e-42 176.4 136 58.1
PRCOL_00000185 Prasinoderma coloniale HOM05D006017 ORTHO05D007821 3.0e-41 172.2 135 61.5
Hund22764 Selenicereus undatus HOM05D006017 ORTHO05D007821 6.7e-33 144.4 77 77.9
CSS0021316 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 9.7e-32 140.6 77 79.2
Duzib170G0488 Durio zibethinus HOM05D006017 ORTHO05D007821 1.4e-22 110.2 59 84.7
CSS0031230 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 1.3e-15 87.0 44 88.6
Nitab4.5_0005445g0020 Nicotiana tabacum HOM05D006017 ORTHO05D007821 1.3e-15 87.0 47 78.7
HPP92_003866 Vanilla planifolia HOM05D006017 ORTHO05D007821 1.6e-10 70.1 54 63.0
BcaC04g20394 Brassica carinata HOM05D006017 ORTHO05D007821 7.0e-06 54.7 44 59.1


User provided reference genes

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