Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu061298.1 Olea europaea HOM05D006549 ORTHO05D008080 0.0e+00 1119.0 619 100.0
Oeu025891.1 Olea europaea HOM05D006549 ORTHO05D008080 1.5e-137 494.2 620 54.2
MSTRG.17620 Avicennia marina HOM05D006549 ORTHO05D008080 7.6e-102 375.6 617 42.8
Migut.N02355 Erythranthe guttata HOM05D006549 ORTHO05D008080 3.1e-95 353.6 617 41.2
Sabra09G0036200 Salix brachista HOM05D006549 ORTHO05D008080 2.4e-92 344.0 624 39.6
Cc01_g06100 Coffea canephora HOM05D006549 ORTHO05D008080 1.6e-91 341.3 619 38.6
Sabra16G0155200 Salix brachista HOM05D006549 ORTHO05D008080 1.8e-90 337.8 628 41.2
Nitab4.5_0006878g0020 Nicotiana tabacum HOM05D006549 ORTHO05D008080 5.1e-90 336.3 620 39.0
Rhsim13G0217400 Rhododendron simsii HOM05D002345 ORTHO05D002391 3.3e-89 333.6 561 46.9
GSVIVG01031548001 Vitis vinifera HOM05D006549 ORTHO05D008080 3.3e-89 333.6 621 38.3
Thecc.09G240800 Theobroma cacao HOM05D006549 ORTHO05D008080 1.3e-88 331.6 620 37.7
FAN11G3700 Fragaria x ananassa HOM05D006549 ORTHO05D008080 3.7e-88 330.1 619 39.6
FvH4_3g28330 Fragaria vesca HOM05D006549 ORTHO05D008080 4.8e-88 329.7 619 39.6
Actinidia06932 Actinidia chinensis HOM05D006549 ORTHO05D008080 6.2e-88 329.3 379 56.2
Potri.001G254600 Populus trichocarpa HOM05D006549 ORTHO05D008080 1.1e-87 328.6 627 38.6
Lju41A40T23 Lonicera japonica HOM05D006549 ORTHO05D008080 1.4e-87 328.2 328 59.5
Duzib170G0947 Durio zibethinus HOM05D006549 ORTHO05D008080 1.5e-86 324.7 619 38.3
Nn7g36445 Nelumbo nucifera HOM05D006549 ORTHO05D008080 2.0e-86 324.3 614 39.6
Manes.14G005500 Manihot esculenta HOM05D006549 ORTHO05D008080 2.6e-86 323.9 623 37.7
Dinv22152 Davidia involucrata HOM05D006549 ORTHO05D008080 5.8e-86 322.8 624 37.3
Actinidia16353 Actinidia chinensis HOM05D006549 ORTHO05D008080 2.2e-85 320.9 620 40.2
Gorai.006G126000 Gossypium raimondii HOM05D006549 ORTHO05D008080 2.2e-85 320.9 619 38.4
Gohir.D09G108300 Gossypium hirsutum HOM05D006549 ORTHO05D008080 3.8e-85 320.1 619 38.4
Gohir.A09G111700 Gossypium hirsutum HOM05D006549 ORTHO05D008080 6.4e-85 319.3 619 38.4
Potri.009G049700 Populus trichocarpa HOM05D006549 ORTHO05D008080 6.4e-85 319.3 621 37.7
vmacro04120 Vaccinium macrocarpon HOM05D006549 ORTHO05D008080 8.4e-85 318.9 314 60.8
CAN.G633.4 Capsicum annuum HOM05D006549 ORTHO05D008080 1.9e-84 317.8 620 37.6
CSS0047891 Camellia sinensis var. sinensis HOM05D006549 ORTHO05D008080 3.2e-84 317.0 314 60.5
Nitab4.5_0002726g0080 Nicotiana tabacum HOM05D006549 ORTHO05D008080 3.2e-84 317.0 324 57.1
Dinv36213 Davidia involucrata HOM05D006549 ORTHO05D008080 5.5e-84 316.2 268 64.2
CiPaw.13G153800 Carya illinoinensis HOM05D006549 ORTHO05D008080 3.5e-83 313.5 318 58.5
FAN21G3651 Fragaria x ananassa HOM05D006549 ORTHO05D008080 1.0e-82 312.0 628 38.2
unitig_27.g25003 Utricularia gibba HOM05D006549 ORTHO05D008080 1.0e-82 312.0 618 36.9
PGR102G0709 Punica granatum HOM05D006549 ORTHO05D008080 2.3e-82 310.8 621 37.7
PGSC0003DMG400031244 Solanum tuberosum HOM05D006549 ORTHO05D008080 8.7e-82 308.9 321 56.1
TWI39G1226 Tripterygium wilfordii HOM05D006549 ORTHO05D008080 8.7e-82 308.9 619 38.6
Prupe.4G256800 Prunus persica HOM05D006549 ORTHO05D008080 1.1e-81 308.5 620 40.2
Solyc11g065180.2 Solanum lycopersicum HOM05D006549 ORTHO05D008080 1.3e-80 305.1 320 57.5
SGA_v2.0_scaffold42G16082 Striga asiatica HOM05D006549 ORTHO05D008080 4.8e-80 303.1 617 36.0
Sopen11g024900 Solanum pennellii HOM05D006549 ORTHO05D008080 6.2e-80 302.8 322 57.1
TPR.G38023 Trifolium pratense HOM05D006549 ORTHO05D008080 8.2e-80 302.4 602 38.7
ECA238G1745 Erigeron canadensis HOM05D006549 ORTHO05D008080 1.4e-79 301.6 317 53.9
RcHm_v2.0_Chr5g0051211 Rosa chinensis HOM05D006549 ORTHO05D008080 1.4e-79 301.6 620 36.0
QL01p018092 Quercus lobata HOM05D006549 ORTHO05D008080 3.1e-79 300.4 337 55.5
DCAR_000660 Daucus carota HOM05D006549 ORTHO05D008080 5.3e-79 299.7 624 39.3
Eucgr.B03712 Eucalyptus grandis HOM05D006549 ORTHO05D008080 5.3e-79 299.7 317 58.7
Aqoxy1G00310 Aquilegia oxysepala HOM05D006549 ORTHO05D008080 9.0e-79 298.9 314 57.3
Sc09g0000890 Simmondsia chinensis HOM05D006549 ORTHO05D008080 1.5e-78 298.1 320 57.8
MD03G1170300 Malus domestica HOM05D006549 ORTHO05D008080 2.6e-78 297.4 619 36.8
VMungo1215G3210 Vigna mungo HOM05D006549 ORTHO05D008080 3.4e-78 297.0 616 38.6
CANSAT54G0570 Cannabis sativa HOM05D006549 ORTHO05D008080 1.7e-77 294.7 319 54.5
Medtr5g009010 Medicago truncatula HOM05D006549 ORTHO05D008080 1.7e-77 294.7 319 53.6
Lsat_1_v5_gn_2_29261 Lactuca sativa HOM05D006549 ORTHO05D008080 2.9e-77 293.9 320 52.2
C09p64480 Brassica napus HOM05D006549 ORTHO05D008080 3.8e-77 293.5 316 52.8
BolC9t59282H Brassica oleracea HOM05D006549 ORTHO05D008080 3.8e-77 293.5 316 52.8
Phvul.002G033900 Phaseolus vulgaris HOM05D006549 ORTHO05D008080 3.8e-77 293.5 600 38.0
Glyma.11G015900 Glycine max HOM05D006549 ORTHO05D008080 8.4e-77 292.4 319 57.1
MD11G1187800 Malus domestica HOM05D006549 ORTHO05D008080 1.1e-76 292.0 332 51.2
Sed0027042 Sechium edule HOM05D006549 ORTHO05D008080 1.1e-76 292.0 621 38.5
BraA03t09898Z Brassica rapa HOM05D006549 ORTHO05D008080 1.9e-76 291.2 314 52.2
arahy.Tifrunner.gnm1.ann1.2W4GIE Arachis hypogaea HOM05D006549 ORTHO05D008080 2.5e-76 290.8 611 37.3
EL10Ac4g10185 Beta vulgaris HOM05D006549 ORTHO05D008080 2.5e-76 290.8 323 54.2
CARHR200690 Cardamine hirsuta HOM05D006549 ORTHO05D008080 2.5e-76 290.8 316 54.1
A03p05610 Brassica napus HOM05D006549 ORTHO05D008080 9.3e-76 288.9 326 50.9
Ciclev10015584m.g Citrus clementina HOM05D006549 ORTHO05D008080 2.1e-75 287.7 603 37.5
Haze_23190 Corylus avellana HOM05D006549 ORTHO05D008080 2.1e-75 287.7 659 35.4
Glyma.01G226800 Glycine max HOM05D006549 ORTHO05D008080 2.7e-75 287.3 327 56.0
LjContig00222g0000121 Lotus japonicus HOM05D006549 ORTHO05D008080 1.0e-74 285.4 600 38.0
Ah.06g193800 Amaranthus hybridus HOM05D006549 ORTHO05D008080 1.3e-74 285.0 327 53.5
BolC3t13156H Brassica oleracea HOM05D006549 ORTHO05D008080 1.3e-74 285.0 319 49.5
AUR62000165 Chenopodium quinoa HOM05D006549 ORTHO05D008080 1.3e-74 285.0 617 34.7
ClCG03G013060 Citrullus lanatus HOM05D006549 ORTHO05D008080 3.0e-74 283.9 621 37.7
AL6G23210 Arabidopsis lyrata HOM05D006549 ORTHO05D008080 6.7e-74 282.7 317 53.0
COL.COLO4_36476 Corchorus olitorius HOM05D006549 ORTHO05D008080 6.7e-74 282.7 620 36.5
Peaxi162Scf00004g03918 Petunia axillaris HOM05D006549 ORTHO05D008080 1.5e-73 281.6 240 62.5
Carub.0006s1091 Capsella rubella HOM05D006549 ORTHO05D008080 1.9e-73 281.2 316 52.2
BraA10t44605Z Brassica rapa HOM05D006549 ORTHO05D008080 2.5e-73 280.8 314 51.0
AUR62039846 Chenopodium quinoa HOM05D006549 ORTHO05D008080 3.3e-73 280.4 617 33.4
A10p25410 Brassica napus HOM05D006549 ORTHO05D008080 5.7e-73 279.6 316 51.3
THA.LOC104811185 Tarenaya hassleriana HOM05D006549 ORTHO05D008080 9.7e-73 278.9 313 53.7
Atru.chr3.2633 Acer truncatum HOM05D006549 ORTHO05D008080 1.4e-71 275.0 314 57.3
Aa31LG3G14820 Aethionema arabicum HOM05D006549 ORTHO05D008080 1.4e-71 275.0 328 51.5
CsaV3_1G043000 Cucumis sativus L. HOM05D006549 ORTHO05D008080 1.8e-71 274.6 329 54.1
Hund07453 Selenicereus undatus HOM05D006549 ORTHO05D008080 2.4e-71 274.2 321 52.6
AT5G12410 Arabidopsis thaliana HOM05D006549 ORTHO05D008080 4.1e-71 273.5 324 51.9
arahy.Tifrunner.gnm1.ann1.9560XR Arachis hypogaea HOM05D006549 ORTHO05D008080 9.0e-71 272.3 317 53.3
Sp6g31230 Schrenkiella parvula HOM05D006549 ORTHO05D008080 4.5e-70 270.0 609 35.5
Psat2g186960 Pisum sativum HOM05D000745 ORTHO05D000641 5.9e-70 269.6 324 51.9
C03p06560 Brassica napus HOM05D006549 ORTHO05D008080 1.0e-69 268.9 318 48.1
CDE08G0181 Ceratophyllum demersum HOM05D006549 ORTHO05D008080 5.0e-69 266.5 312 46.5
HanXRQChr14g0433001 Helianthus annuus HOM05D006549 ORTHO05D008080 1.1e-68 265.4 315 50.8
Ca_24492_v3 Cicer arietinum L. HOM05D000745 ORTHO05D000641 1.4e-68 265.0 313 55.0
Os11g0568600 Oryza sativa ssp. japonica HOM05D006549 ORTHO05D008080 2.5e-68 264.2 326 47.2
ATR0721G160 Amborella trichopoda HOM05D006549 ORTHO05D008080 5.5e-68 263.1 319 48.0
Thhalv10013724m.g Eutrema salsugineum HOM05D006549 ORTHO05D008080 7.2e-68 262.7 608 32.4
MBI13_g04769_MAGBIO Magnolia biondii HOM05D006549 ORTHO05D008080 9.3e-68 262.3 620 34.0
QL01p018141 Quercus lobata HOM05D006549 ORTHO05D008080 1.6e-67 261.5 346 51.4
Lalb_Chr09g0320561 Lupinus albus HOM05D006549 ORTHO05D008080 1.0e-66 258.8 614 33.4
FAN16G0297 Fragaria x ananassa HOM05D006549 ORTHO05D008080 1.1e-65 255.4 164 74.4
Zm00001eb200070 Zea mays HOM05D006549 ORTHO05D008080 2.8e-64 250.8 621 32.2
PSO384G3463 Papaver somniferum HOM05D006549 ORTHO05D008080 8.2e-64 249.2 619 32.6
PSO339G6663 Papaver somniferum HOM05D006549 ORTHO05D008080 1.2e-62 245.4 619 31.8
BcaB01g05403 Brassica carinata HOM05D006549 ORTHO05D008080 2.6e-62 244.2 646 31.6
SEGI_14205 Sequoiadendron giganteum HOM05D006549 ORTHO05D008080 1.0e-58 232.3 277 48.4
TAR633G0410 Trochodendron aralioides HOM05D006549 ORTHO05D008080 2.8e-56 224.2 141 76.6
Hma1.2p1_1043F.1_g251200 Hydrangea macrophylla HOM05D006549 ORTHO05D008080 1.0e-53 215.7 135 74.8
BcaB08g37001 Brassica carinata HOM05D006549 ORTHO05D008080 1.3e-45 188.7 311 41.8
SHI46597 Sapria himalayana HOM05D006549 ORTHO05D008080 1.9e-44 184.9 342 37.1
Duzib168G0228 Durio zibethinus HOM05D006549 ORTHO05D008080 7.2e-44 183.0 287 47.7
Cc01_g06170 Coffea canephora HOM05D006549 ORTHO05D008080 6.1e-43 179.9 112 77.7
Mapoly0091s0083 Marchantia polymorpha HOM05D006549 ORTHO05D008080 8.2e-40 169.5 207 44.0
AagrBONN_evm.TU.Sc2ySwM_228.1610 Anthoceros agrestis HOM05D006549 ORTHO05D008080 5.3e-39 166.8 237 40.1
SMO013G0006 Selaginella moellendorffii HOM05D006549 ORTHO05D008080 5.3e-39 166.8 208 44.2
Pp3c3_2270 Physcomitrium patens HOM05D006549 ORTHO05D008080 3.2e-36 157.5 188 43.1
PRCOL_00001563 Prasinoderma coloniale HOM05D006549 ORTHO05D008080 4.0e-26 124.0 179 41.3
CBR_g300 Chara braunii HOM05D006549 ORTHO05D008080 3.4e-25 120.9 290 29.7
HPP92_011577 Vanilla planifolia HOM05D006549 ORTHO05D008080 9.2e-23 112.8 221 38.5
MELO3C015170.2 Cucumis melo HOM05D006549 ORTHO05D008080 2.7e-22 111.3 92 64.1
MCO09G159 Micromonas commoda HOM05D006549 ORTHO05D008080 6.6e-21 106.7 215 31.2
MELO3C029487.2 Cucumis melo HOM05D006549 ORTHO05D008080 2.3e-18 98.2 64 73.4
Cpa.g.sc84.3 Carica papaya HOM05D006549 ORTHO05D008080 4.4e-17 94.0 58 79.3
BolC3t13160H Brassica oleracea HOM05D006549 ORTHO05D008080 5.8e-17 93.6 76 57.9
Cre14.g629550 Chlamydomonas reinhardtii HOM05D006549 ORTHO05D008080 9.2e-15 86.3 175 31.4
Cpa.g.c41750 Carica papaya HOM05D006549 ORTHO05D008080 3.9e-13 80.9 78 55.1
CSS0036252 Camellia sinensis var. sinensis HOM05D006549 ORTHO05D008080 1.5e-12 79.0 59 66.1


User provided reference genes

Program Settings