Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu061273.1 Olea europaea HOM05D008268 ORTHO05D010144 8.1e-177 623.6 313 100.0
Dinv22349 Davidia involucrata HOM05D008268 ORTHO05D010144 6.6e-46 188.7 358 41.3
Dinv08361 Davidia involucrata HOM05D008268 ORTHO05D010144 3.2e-40 169.9 356 41.0
Thecc.07G068700 Theobroma cacao HOM05D008268 ORTHO05D010144 7.9e-23 112.1 327 36.7
Duzib170G0253 Durio zibethinus HOM05D008268 ORTHO05D010144 8.7e-22 108.6 299 35.1
Gohir.D01G057100 Gossypium hirsutum HOM05D008268 ORTHO05D010144 8.7e-22 108.6 347 34.6
Gorai.002G077500 Gossypium raimondii HOM05D008268 ORTHO05D010144 8.7e-22 108.6 347 34.6
Gohir.A01G069900 Gossypium hirsutum HOM05D008268 ORTHO05D010144 7.4e-21 105.5 343 34.7
Actinidia09966 Actinidia chinensis HOM05D008268 ORTHO05D010144 1.6e-20 104.4 295 36.9
Duzib213G0412 Durio zibethinus HOM05D008268 ORTHO05D010144 1.6e-20 104.4 325 34.5
CSS0042196 Camellia sinensis var. sinensis HOM05D008268 ORTHO05D010144 2.2e-20 104.0 339 33.3
CSS0041304 Camellia sinensis var. sinensis HOM05D008268 ORTHO05D010144 5.3e-19 99.4 340 33.2
CiPaw.11G178900 Carya illinoinensis HOM05D008268 ORTHO05D010144 2.0e-18 97.4 322 31.4
Manes.15G081401 Manihot esculenta HOM05D008268 ORTHO05D010144 7.7e-18 95.5 342 32.2
QL08p017136 Quercus lobata HOM05D008268 ORTHO05D010144 7.7e-18 95.5 338 32.2
TAR626G0659 Trochodendron aralioides HOM05D008268 ORTHO05D010144 1.4e-16 91.3 314 33.8
MBI02_g38752_MAGBIO Magnolia biondii HOM05D008268 ORTHO05D010144 3.2e-16 90.1 285 33.7
Migut.M01849 Erythranthe guttata HOM05D008268 ORTHO05D010144 4.2e-16 89.7 338 30.8
MBI02_g46151_MAGBIO Magnolia biondii HOM05D008268 ORTHO05D010144 4.2e-16 89.7 285 33.7
RhsimUnG0172800 Rhododendron simsii HOM05D047612 ORTHO05D010144 2.1e-15 87.4 324 35.2
Cpa.g.sc12.16 Carica papaya HOM05D008268 ORTHO05D010144 1.0e-14 85.1 361 29.6
Cfa020486 Carpinus fangiana HOM05D008268 ORTHO05D010144 2.3e-14 84.0 323 31.0
Nitab4.5_0000297g0210 Nicotiana tabacum HOM05D015394 ORTHO05D017774 2.3e-14 84.0 357 29.4
Phvul.005G087800 Phaseolus vulgaris HOM05D008268 ORTHO05D010144 3.3e-13 80.1 308 32.8
RhsimUnG0257100 Rhododendron simsii HOM05D047612 ORTHO05D010144 7.4e-13 79.0 339 33.0
Peaxi162Scf00000g07812 Petunia axillaris HOM05D015394 ORTHO05D017774 1.3e-12 78.2 310 30.6
Glyma.13G282800 Glycine max HOM05D008268 ORTHO05D010144 4.8e-12 76.3 342 32.2
Lsat_1_v5_gn_0_5400 Lactuca sativa HOM05D008268 ORTHO05D010144 8.2e-12 75.5 160 40.6
MD11G1234600 Malus domestica HOM05D008268 ORTHO05D010144 8.2e-12 75.5 395 26.8
Nitab4.5_0001252g0050 Nicotiana tabacum HOM05D015394 ORTHO05D017774 1.1e-11 75.1 375 29.3
Atru.chr2.2941 Acer truncatum HOM05D008268 ORTHO05D010144 1.8e-11 74.3 368 29.6
VMungo1080G0851 Vigna mungo HOM05D008268 ORTHO05D010144 3.1e-11 73.6 306 32.7
Peaxi162Scf01216g00063 Petunia axillaris HOM05D015394 ORTHO05D017774 5.3e-11 72.8 329 29.8
SHI51816 Sapria himalayana HOM05D008268 ORTHO05D010144 2.0e-10 70.9 370 28.6
Haze_09553 Corylus avellana HOM05D008268 ORTHO05D010144 3.4e-10 70.1 309 30.4
Rhsim06G0192000 Rhododendron simsii HOM05D008268 ORTHO05D010144 4.5e-10 69.7 357 28.9
Sabra16G0271800 Salix brachista HOM05D019858 ORTHO05D010144 1.7e-09 67.8 338 30.2
Sabra16G0276800 Salix brachista HOM05D019858 ORTHO05D010144 1.7e-09 67.8 338 30.2
Glyma.12G217800 Glycine max HOM05D008268 ORTHO05D010144 2.2e-09 67.4 183 35.0
Medtr2g081240 Medicago truncatula HOM05D008268 ORTHO05D010144 3.8e-09 66.6 314 31.8
Prupe.4G192500 Prunus persica HOM05D008268 ORTHO05D010144 6.5e-09 65.9 380 27.1
Sopen07g031850 Solanum pennellii HOM05D015394 ORTHO05D017774 1.4e-08 64.7 348 27.9
Nn1g06831 Nelumbo nucifera HOM05D008268 ORTHO05D010144 1.9e-08 64.3 348 28.2
Solyc07g063670.2 Solanum lycopersicum HOM05D015394 ORTHO05D017774 4.2e-08 63.2 348 27.9
COL.COLO4_09500 Corchorus olitorius HOM05D008268 ORTHO05D010144 5.5e-08 62.8 159 34.6
TWI38G2068 Tripterygium wilfordii HOM05D008268 ORTHO05D010144 1.6e-07 61.2 299 31.8
TPR.G32855 Trifolium pratense HOM05D008268 ORTHO05D010144 2.1e-07 60.8 212 34.4
GSVIVG01014468001 Vitis vinifera HOM05D008268 ORTHO05D010144 2.1e-07 60.8 233 30.0
Lalb_Chr25g0286831 Lupinus albus HOM05D008268 ORTHO05D010144 7.9e-07 58.9 376 27.9
Potri.001G409000 Populus trichocarpa HOM05D019858 ORTHO05D010144 1.0e-06 58.5 313 29.7
MD03G1216800 Malus domestica HOM05D008268 ORTHO05D010144 1.4e-06 58.2 321 27.7
THA.LOC104799901 Tarenaya hassleriana HOM05D010655 ORTHO05D012747 3.9e-06 56.6 357 28.6


User provided reference genes

Program Settings