Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu061211.1 Olea europaea HOM05D006158 ORTHO05D007065 4.5e-57 224.2 98 100.0
BcaB08g34988 Brassica carinata HOM05D006158 ORTHO05D007065 8.5e-08 60.5 38 57.9
BcaC07g41131 Brassica carinata HOM05D006158 ORTHO05D007065 8.5e-08 60.5 38 57.9
AL4G10820 Arabidopsis lyrata HOM05D006158 ORTHO05D007065 1.1e-07 60.1 38 55.3
AT2G21620 Arabidopsis thaliana HOM05D006158 ORTHO05D007065 1.1e-07 60.1 38 55.3
THA.LOC104824819 Tarenaya hassleriana HOM05D006158 ORTHO05D007065 1.1e-07 60.1 38 55.3
Aa31LG7G14860 Aethionema arabicum HOM05D006158 ORTHO05D007065 1.9e-07 59.3 61 42.6
Thhalv10000338m.g Eutrema salsugineum HOM05D006158 ORTHO05D007065 2.5e-07 58.9 61 42.6
Sp4g00780 Schrenkiella parvula HOM05D006158 ORTHO05D007065 3.2e-07 58.5 61 42.6
CSS0017185 Camellia sinensis var. sinensis HOM05D006158 ORTHO05D007065 9.4e-07 57.0 54 48.1
CARHR112610 Cardamine hirsuta HOM05D006158 ORTHO05D007065 9.4e-07 57.0 38 52.6
unitig_0.g63 Utricularia gibba HOM05D006158 ORTHO05D007065 9.4e-07 57.0 31 71.0
CDE11G1056 Ceratophyllum demersum HOM05D006158 ORTHO05D007065 1.2e-06 56.6 31 71.0
Migut.B00227 Erythranthe guttata HOM05D006158 ORTHO05D007065 1.6e-06 56.2 31 71.0
Oeu020748.1 Olea europaea HOM05D006158 ORTHO05D007065 1.6e-06 56.2 31 71.0
MBI16_g07736_MAGBIO Magnolia biondii HOM05D006158 ORTHO05D007065 3.6e-06 55.1 31 67.7
Nn5g29641 Nelumbo nucifera HOM05D006158 ORTHO05D007065 3.6e-06 55.1 31 67.7
Os02g0705400 Oryza sativa ssp. japonica HOM05D006158 ORTHO05D007065 3.6e-06 55.1 31 67.7
TAR381G1268 Trochodendron aralioides HOM05D006158 ORTHO05D007065 3.6e-06 55.1 31 67.7
Zm00001eb252090 Zea mays HOM05D006158 ORTHO05D007065 3.6e-06 55.1 31 67.7
Carub.0004s0065 Capsella rubella HOM05D006158 ORTHO05D007065 4.7e-06 54.7 35 54.3
Manes.11G086500 Manihot esculenta HOM05D006158 ORTHO05D007065 6.1e-06 54.3 33 54.5
Gohir.D12G028800 Gossypium hirsutum HOM05D006158 ORTHO05D007065 8.0e-06 53.9 54 42.6
Peaxi162Scf00684g00228 Petunia axillaris HOM05D006158 ORTHO05D007065 8.0e-06 53.9 54 46.3


User provided reference genes

Program Settings