Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu061066.1 Olea europaea HOM05D004299 ORTHO05D003557 0.0e+00 1135.2 670 100.0
MSTRG.13 Avicennia marina HOM05D004299 ORTHO05D003557 2.9e-54 217.6 744 32.7
Migut.F00952 Erythranthe guttata HOM05D004299 ORTHO05D003557 7.6e-39 166.4 679 31.8
Peaxi162Scf00815g00349 Petunia axillaris HOM05D004299 ORTHO05D003557 2.4e-37 161.4 273 45.1
Actinidia34301 Actinidia chinensis HOM05D004299 ORTHO05D003557 3.2e-37 161.0 261 46.0
Nitab4.5_0005081g0100 Nicotiana tabacum HOM05D004299 ORTHO05D003557 6.0e-36 156.8 808 28.2
CSS0010494 Camellia sinensis var. sinensis HOM05D004299 ORTHO05D003557 2.8e-33 147.9 507 31.6
CSS0016343 Camellia sinensis var. sinensis HOM05D004299 ORTHO05D003557 2.8e-33 147.9 492 31.5
SalBow2G2429 Salvia bowleyana HOM05D004299 ORTHO05D003557 6.2e-33 146.7 372 36.0
PGSC0003DMG400026934 Solanum tuberosum HOM05D004299 ORTHO05D003557 1.1e-32 146.0 417 33.8
Sopen06g029190 Solanum pennellii HOM05D004299 ORTHO05D003557 3.1e-32 144.4 412 34.0
Hma1.2p1_0758F.1_g213620 Hydrangea macrophylla HOM05D004299 ORTHO05D003557 1.5e-31 142.1 208 49.0
Nitab4.5_0000115g0360 Nicotiana tabacum HOM05D004299 ORTHO05D003557 9.9e-31 139.4 486 33.3
CsaV3_5G005290 Cucumis sativus L. HOM05D013728 ORTHO05D003557 8.4e-30 136.3 731 27.9
Lj3A889G76 Lonicera japonica HOM05D004299 ORTHO05D003557 7.1e-29 133.3 720 28.5
ClCG01G005040 Citrullus lanatus HOM05D013728 ORTHO05D003557 3.5e-28 131.0 733 27.4
Nitab4.5_0002193g0040 Nicotiana tabacum HOM05D004299 ORTHO05D003557 1.7e-27 128.6 505 33.3
Nitab4.5_0000021g0310 Nicotiana tabacum HOM05D004299 ORTHO05D003557 2.3e-27 128.3 457 31.5
Actinidia08739 Actinidia chinensis HOM05D004299 ORTHO05D003557 6.2e-25 120.2 797 27.1
CsaV3_5G015680 Cucumis sativus L. HOM05D004299 ORTHO05D003557 8.1e-25 119.8 223 40.4
Dinv29171 Davidia involucrata HOM05D004299 ORTHO05D003557 8.1e-25 119.8 131 58.0
Haze_00596 Corylus avellana HOM05D004299 ORTHO05D003557 2.4e-24 118.2 443 32.7
QL09p025753 Quercus lobata HOM05D004299 ORTHO05D003557 2.4e-24 118.2 430 32.3
MELO3C005430.2 Cucumis melo HOM05D013728 ORTHO05D003557 5.3e-24 117.1 740 26.8
vmacro06502 Vaccinium macrocarpon HOM05D004299 ORTHO05D003557 9.0e-24 116.3 798 26.3
Gohir.D08G243500 Gossypium hirsutum HOM05D004299 ORTHO05D003557 1.2e-23 115.9 288 37.2
Solyc06g072810.4 Solanum lycopersicum HOM05D004299 ORTHO05D003557 1.2e-23 115.9 772 26.2
Peaxi162Scf00745g00852 Petunia axillaris HOM05D004299 ORTHO05D003557 1.5e-23 115.5 362 35.4
Sabra13G0071500 Salix brachista HOM05D004299 ORTHO05D003557 4.9e-22 110.5 291 34.0
unitig_52.g17695 Utricularia gibba HOM05D004299 ORTHO05D003557 6.4e-22 110.2 203 40.9
GSVIVG01024444001 Vitis vinifera HOM05D004299 ORTHO05D003557 6.4e-22 110.2 332 35.2
Gohir.A08G223300 Gossypium hirsutum HOM05D004299 ORTHO05D003557 1.1e-21 109.4 290 36.6
Prupe.2G324100 Prunus persica HOM05D004299 ORTHO05D003557 1.9e-21 108.6 465 29.9
Cfa015894 Carpinus fangiana HOM05D004299 ORTHO05D003557 2.4e-21 108.2 372 31.5
Manes.09G124200 Manihot esculenta HOM05D004299 ORTHO05D003557 2.4e-21 108.2 517 27.7
Glyma.11G092600 Glycine max HOM05D004299 ORTHO05D003557 3.2e-21 107.8 291 33.3
MD01G1233900 Malus domestica HOM05D004299 ORTHO05D003557 1.6e-20 105.5 603 26.7
CiPaw.05G237300 Carya illinoinensis HOM05D004299 ORTHO05D003557 3.5e-20 104.4 539 27.1
arahy.Tifrunner.gnm1.ann1.R3QID6 Arachis hypogaea HOM05D004299 ORTHO05D003557 4.6e-20 104.0 589 28.0
Cpa.g.sc39.57 Carica papaya HOM05D004299 ORTHO05D003557 2.3e-19 101.7 342 33.0
Atru.chr12.1996 Acer truncatum HOM05D004299 ORTHO05D003557 5.1e-19 100.5 256 36.3
Glyma.12G018900 Glycine max HOM05D004299 ORTHO05D003557 6.7e-19 100.1 313 31.9
PGR042G3162 Punica granatum HOM05D004299 ORTHO05D003557 2.5e-18 98.2 702 26.4
Rhsim03G0220700 Rhododendron simsii HOM05D004299 ORTHO05D003557 3.3e-18 97.8 388 29.9
MD07G1306000 Malus domestica HOM05D004299 ORTHO05D003557 7.4e-18 96.7 584 27.6
Manes.08G164200 Manihot esculenta HOM05D004299 ORTHO05D003557 9.6e-18 96.3 846 25.1
Oeu049055.1 Olea europaea HOM05D004299 ORTHO05D003557 9.6e-18 96.3 70 74.3
Thecc.05G208300 Theobroma cacao HOM05D004299 ORTHO05D003557 1.6e-17 95.5 480 28.3
Potri.013G081600 Populus trichocarpa HOM05D004299 ORTHO05D003557 2.1e-17 95.1 300 31.0
Sc19g0000210 Simmondsia chinensis HOM05D004299 ORTHO05D003557 3.6e-17 94.4 123 48.8
AT5G17160 Arabidopsis thaliana HOM05D004299 ORTHO05D003557 6.2e-17 93.6 241 37.3
DCAR_014573 Daucus carota HOM05D004299 ORTHO05D003557 6.2e-17 93.6 685 26.4
AT3G03130 Arabidopsis thaliana HOM05D004299 ORTHO05D003557 1.1e-16 92.8 196 37.2
Sp3g02170 Schrenkiella parvula HOM05D004299 ORTHO05D003557 1.1e-16 92.8 476 29.6
Medtr4g077590 Medicago truncatula HOM05D004299 ORTHO05D003557 1.4e-16 92.4 240 35.0
Duzib106G1502 Durio zibethinus HOM05D004299 ORTHO05D003557 2.4e-16 91.7 326 31.6
COL.COLO4_06387 Corchorus olitorius HOM05D004299 ORTHO05D003557 3.1e-16 91.3 571 28.2
TAR374G1619 Trochodendron aralioides HOM05D004299 ORTHO05D003557 3.1e-16 91.3 530 29.1
Duzib128G1020 Durio zibethinus HOM05D004299 ORTHO05D003557 4.0e-16 90.9 132 46.2
Gorai.004G259400 Gossypium raimondii HOM05D004299 ORTHO05D003557 4.0e-16 90.9 741 25.2
Sed0000182 Sechium edule HOM05D004299 ORTHO05D003557 4.0e-16 90.9 492 27.0
A06p26270 Brassica napus HOM05D004299 ORTHO05D003557 5.3e-16 90.5 383 31.6
BNapus_Darmor_BZH_scaffold_78p00020 Brassica napus HOM05D004299 ORTHO05D003557 5.3e-16 90.5 383 31.6
ECA246G3276 Erigeron canadensis HOM05D004299 ORTHO05D003557 5.3e-16 90.5 364 28.6
PSO017G1908 Papaver somniferum HOM05D004299 ORTHO05D003557 5.3e-16 90.5 251 32.7
Potri.019G046801 Populus trichocarpa HOM05D004299 ORTHO05D003557 5.3e-16 90.5 504 27.2
BraA01t04590Z Brassica rapa HOM05D004299 ORTHO05D003557 9.0e-16 89.7 255 36.1
TAR374G0649 Trochodendron aralioides HOM05D004299 ORTHO05D003557 9.0e-16 89.7 530 29.2
BcaC04g18829 Brassica carinata HOM05D004299 ORTHO05D003557 1.5e-15 89.0 197 38.6
Sabra19G0058100 Salix brachista HOM05D004299 ORTHO05D003557 2.0e-15 88.6 367 31.1
SalBow4G2051 Salvia bowleyana HOM05D004299 ORTHO05D003557 4.5e-15 87.4 413 28.6
arahy.Tifrunner.gnm1.ann1.KHZX7Q Arachis hypogaea HOM05D004299 ORTHO05D003557 7.6e-15 86.7 531 27.5
Sed0018309 Sechium edule HOM05D004299 ORTHO05D003557 7.6e-15 86.7 353 30.6
AL6G28200 Arabidopsis lyrata HOM05D004299 ORTHO05D003557 1.7e-14 85.5 365 30.4
Lj3g0021850 Lotus japonicus HOM05D004299 ORTHO05D003557 1.7e-14 85.5 286 31.5
ECA247G1921 Erigeron canadensis HOM05D004299 ORTHO05D003557 2.9e-14 84.7 339 31.6
HanXRQChr17g0554401 Helianthus annuus HOM05D004299 ORTHO05D003557 2.9e-14 84.7 466 30.0
CANSAT35G1347 Cannabis sativa HOM05D004299 ORTHO05D003557 4.9e-14 84.0 143 44.1
Thhalv10013127m.g Eutrema salsugineum HOM05D004299 ORTHO05D003557 6.4e-14 83.6 366 29.5
Sp6g27070 Schrenkiella parvula HOM05D004299 ORTHO05D003557 6.4e-14 83.6 586 26.6
TPR.G8414 Trifolium pratense HOM05D004299 ORTHO05D003557 6.4e-14 83.6 289 32.5
C03p09520 Brassica napus HOM05D004299 ORTHO05D003557 1.1e-13 82.8 225 34.7
C03p60040 Brassica napus HOM05D004299 ORTHO05D003557 1.4e-13 82.4 193 35.2
BolC3t18269H Brassica oleracea HOM05D004299 ORTHO05D003557 1.4e-13 82.4 193 35.2
EL10Ac3g05093 Beta vulgaris HOM05D022644 ORTHO05D003557 1.9e-13 82.0 220 34.5
Lsat_1_v5_gn_3_37901 Lactuca sativa HOM05D004299 ORTHO05D003557 1.9e-13 82.0 371 30.5
CARHR196070 Cardamine hirsuta HOM05D004299 ORTHO05D003557 3.2e-13 81.3 339 28.6
Psat7g171480 Pisum sativum HOM05D004299 ORTHO05D003557 3.2e-13 81.3 296 30.1
Eucgr.G02658 Eucalyptus grandis HOM05D004299 ORTHO05D003557 4.2e-13 80.9 767 24.9
Phvul.011G021300 Phaseolus vulgaris HOM05D004299 ORTHO05D003557 5.5e-13 80.5 558 27.4
BcaB08g36802 Brassica carinata HOM05D004299 ORTHO05D003557 7.1e-13 80.1 344 30.5
Carub.0003s0228 Capsella rubella HOM05D004299 ORTHO05D003557 7.1e-13 80.1 319 28.8
Nn3g19291 Nelumbo nucifera HOM05D004299 ORTHO05D003557 7.1e-13 80.1 550 26.5
Cc02_g00400 Coffea canephora HOM05D004299 ORTHO05D003557 9.3e-13 79.7 548 26.3
Carub.0006s1534 Capsella rubella HOM05D004299 ORTHO05D003557 2.1e-12 78.6 412 27.4
MBI04_g44838_MAGBIO Magnolia biondii HOM05D027374 ORTHO05D030041 2.1e-12 78.6 545 25.9
PSO063G4917 Papaver somniferum HOM05D018639 ORTHO05D003557 4.6e-12 77.4 104 48.1
Lsat_1_v5_gn_8_135240 Lactuca sativa HOM05D004299 ORTHO05D003557 6.0e-12 77.0 617 26.4
THA.LOC104802916 Tarenaya hassleriana HOM05D004299 ORTHO05D003557 6.0e-12 77.0 475 28.0
BraA03t10142Z Brassica rapa HOM05D004299 ORTHO05D003557 7.9e-12 76.6 518 26.1
Lsat_1_v5_gn_3_37921 Lactuca sativa HOM05D004299 ORTHO05D003557 1.3e-11 75.9 546 27.1
C02p08770 Brassica napus HOM05D004299 ORTHO05D003557 1.8e-11 75.5 529 27.0
Nn1g01977 Nelumbo nucifera HOM05D004299 ORTHO05D003557 1.8e-11 75.5 791 24.9
SGA_v2.0_scaffold50G18437 Striga asiatica HOM05D024109 ORTHO05D003557 2.3e-11 75.1 816 24.9
BcaC03g18533 Brassica carinata HOM05D004299 ORTHO05D003557 3.0e-11 74.7 483 25.9
A02p03950 Brassica napus HOM05D004299 ORTHO05D003557 3.0e-11 74.7 560 26.6
FAN01G2289 Fragaria x ananassa HOM05D012506 ORTHO05D003557 3.0e-11 74.7 341 30.2
TWI34G1775 Tripterygium wilfordii HOM05D004299 ORTHO05D003557 3.0e-11 74.7 603 26.2
AUR62005909 Chenopodium quinoa HOM05D022644 ORTHO05D003557 6.7e-11 73.6 109 44.0
BcaB01g04949 Brassica carinata HOM05D004299 ORTHO05D003557 8.7e-11 73.2 435 28.0
AL3G12740 Arabidopsis lyrata HOM05D004299 ORTHO05D003557 1.1e-10 72.8 480 27.3
BraA02t05360Z Brassica rapa HOM05D004299 ORTHO05D003557 1.1e-10 72.8 552 26.4
CARHR077150 Cardamine hirsuta HOM05D004299 ORTHO05D003557 1.1e-10 72.8 556 25.9
FvH4_7g33621 Fragaria vesca HOM05D012506 ORTHO05D003557 1.1e-10 72.8 349 30.4
AUR62028156 Chenopodium quinoa HOM05D022644 ORTHO05D003557 1.9e-10 72.0 109 43.1
Aa31LG5G13610 Aethionema arabicum HOM05D004299 ORTHO05D003557 2.5e-10 71.6 565 24.2
BolC2t06791H Brassica oleracea HOM05D004299 ORTHO05D003557 3.3e-10 71.2 542 26.0
A03p08220 Brassica napus HOM05D004299 ORTHO05D003557 5.6e-10 70.5 394 26.1
Actinidia04568 Actinidia chinensis HOM05D004299 ORTHO05D003557 7.4e-10 70.1 207 34.3
Ca_04929_v3 Cicer arietinum L. HOM05D004299 ORTHO05D003557 7.4e-10 70.1 297 27.3
BcaB01g05216 Brassica carinata HOM05D004299 ORTHO05D003557 2.1e-09 68.6 496 26.6
BNapus_Darmor_BZH_scaffold_162p00030 Brassica napus HOM05D004299 ORTHO05D003557 2.1e-09 68.6 491 27.7
BolC1t05844H Brassica oleracea HOM05D004299 ORTHO05D003557 2.1e-09 68.6 491 27.7
FAN10G3788 Fragaria x ananassa HOM05D012506 ORTHO05D003557 3.7e-09 67.8 342 28.9
AUR62034598 Chenopodium quinoa HOM05D022644 ORTHO05D003557 6.2e-09 67.0 62 53.2
FAN10G0189 Fragaria x ananassa HOM05D012506 ORTHO05D003557 6.2e-09 67.0 342 28.9
RcHm_v2.0_Chr1g0383881 Rosa chinensis HOM05D012506 ORTHO05D003557 8.2e-09 66.6 582 25.4
Zm00001eb430160 Zea mays HOM05D033178 ORTHO05D037852 1.8e-08 65.5 165 32.7
CDE02G2994 Ceratophyllum demersum HOM05D004299 ORTHO05D003557 3.1e-08 64.7 303 31.0
HanXRQChr17g0541651 Helianthus annuus HOM05D004299 ORTHO05D003557 5.3e-08 63.9 39 76.9
VMungo1127G2117 Vigna mungo HOM05D004299 ORTHO05D003557 5.3e-08 63.9 600 23.8
Hund21092 Selenicereus undatus HOM05D004299 ORTHO05D003557 1.2e-07 62.8 507 25.6
PSO478G3049 Papaver somniferum HOM05D004299 ORTHO05D003557 3.4e-07 61.2 43 69.8
Ciclev10023566m.g Citrus clementina HOM05D004299 ORTHO05D003557 4.5e-07 60.8 363 27.8
PSO541G1500 Papaver somniferum HOM05D018639 ORTHO05D037265 5.8e-07 60.5 289 26.3
PSO675G1109 Papaver somniferum HOM05D018639 ORTHO05D037265 5.8e-07 60.5 288 29.5
Os04g0597900 Oryza sativa ssp. japonica HOM05D021310 ORTHO05D003557 1.3e-06 59.3 181 33.7
MELO3C026497.2 Cucumis melo HOM05D004299 ORTHO05D003557 1.7e-06 58.9 35 77.1
HanXRQChr05g0158421 Helianthus annuus HOM05D000441 ORTHO05D003557 1.7e-06 58.9 38 71.1
HanXRQChr12g0357091 Helianthus annuus HOM05D000441 ORTHO05D003557 1.7e-06 58.9 38 71.1
Lalb_Chr09g0320301 Lupinus albus HOM05D004299 ORTHO05D003557 1.7e-06 58.9 375 25.9
PSO782G5567 Papaver somniferum HOM05D018639 ORTHO05D003557 2.2e-06 58.5 414 25.1


User provided reference genes

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