Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu060929.1 Olea europaea HOM05D006074 ORTHO05D008728 5.7e-231 803.9 408 100.0
CSS0024892 Camellia sinensis var. sinensis HOM05D006074 ORTHO05D008728 6.0e-164 581.3 416 71.9
Migut.H00904 Erythranthe guttata HOM05D006074 ORTHO05D008728 1.3e-163 580.1 414 72.5
SalBow1G4287 Salvia bowleyana HOM05D006074 ORTHO05D008728 1.8e-160 569.7 413 71.2
vmacro18203 Vaccinium macrocarpon HOM05D006074 ORTHO05D008728 6.9e-160 567.8 403 73.2
Actinidia02708 Actinidia chinensis HOM05D006074 ORTHO05D008728 2.0e-159 566.2 414 71.5
CSS0026498 Camellia sinensis var. sinensis HOM05D006074 ORTHO05D008728 2.6e-159 565.8 398 73.1
Rhsim08G0067900 Rhododendron simsii HOM05D006074 ORTHO05D008728 1.3e-158 563.5 402 72.4
Prupe.3G270100 Prunus persica HOM05D006074 ORTHO05D008728 3.9e-155 552.0 404 71.8
TAR729G0002 Trochodendron aralioides HOM05D006074 ORTHO05D008728 1.5e-154 550.1 367 76.3
Lju41C23G10 Lonicera japonica HOM05D006074 ORTHO05D008728 3.3e-154 548.9 418 70.1
TAR622G0709 Trochodendron aralioides HOM05D006074 ORTHO05D008728 1.3e-153 547.0 365 76.2
Hma1.2p1_0449F.1_g155300 Hydrangea macrophylla HOM05D006074 ORTHO05D008728 8.1e-153 544.3 359 77.7
GSVIVG01011374001 Vitis vinifera HOM05D006074 ORTHO05D008728 2.4e-152 542.7 410 69.3
Sopen03g012680 Solanum pennellii HOM05D006074 ORTHO05D008728 4.0e-152 542.0 364 76.6
CAN.G579.8 Capsicum annuum HOM05D006074 ORTHO05D008728 6.9e-152 541.2 415 69.9
QL02p081203 Quercus lobata HOM05D006074 ORTHO05D008728 9.0e-152 540.8 367 74.9
MD09G1048800 Malus domestica HOM05D006074 ORTHO05D008728 3.4e-151 538.9 398 69.6
PGSC0003DMG400009217 Solanum tuberosum HOM05D006074 ORTHO05D008728 4.5e-151 538.5 398 70.6
CiPaw.03G029000 Carya illinoinensis HOM05D006074 ORTHO05D008728 2.9e-150 535.8 403 68.7
Lsat_1_v5_gn_4_177200 Lactuca sativa HOM05D006074 ORTHO05D008728 2.9e-150 535.8 418 68.2
Solyc03g058860.3 Solanum lycopersicum HOM05D006074 ORTHO05D008728 8.4e-150 534.3 364 75.5
HanXRQChr09g0265461 Helianthus annuus HOM05D006074 ORTHO05D008728 2.4e-149 532.7 382 70.4
Potri.017G080300 Populus trichocarpa HOM05D006074 ORTHO05D008728 4.2e-149 531.9 393 67.7
FAN02G2663 Fragaria x ananassa HOM05D006074 ORTHO05D008728 9.3e-149 530.8 398 69.6
Sabra17G0072000 Salix brachista HOM05D006074 ORTHO05D008728 1.2e-148 530.4 372 70.2
FvH4_6g49080 Fragaria vesca HOM05D006074 ORTHO05D008728 6.0e-148 528.1 358 74.3
PSO832G2479 Papaver somniferum HOM05D006074 ORTHO05D008728 1.8e-147 526.6 367 73.3
CsaV3_3G041590 Cucumis sativus L. HOM05D006074 ORTHO05D008728 2.3e-147 526.2 372 71.2
RcHm_v2.0_Chr2g0168871 Rosa chinensis HOM05D006074 ORTHO05D008728 5.1e-147 525.0 398 68.6
ClCG10G014940 Citrullus lanatus HOM05D006074 ORTHO05D008728 1.9e-146 523.1 372 72.0
Psat1g075640 Pisum sativum HOM05D006074 ORTHO05D008728 2.5e-146 522.7 352 74.1
MBI02_g10680_MAGBIO Magnolia biondii HOM05D006074 ORTHO05D008728 3.3e-146 522.3 380 69.7
CSS0037615 Camellia sinensis var. sinensis HOM05D006074 ORTHO05D008728 1.3e-145 520.4 424 65.3
Duzib187G1598 Durio zibethinus HOM05D006074 ORTHO05D008728 3.7e-145 518.8 399 67.2
MELO3C009883.2 Cucumis melo HOM05D006074 ORTHO05D008728 4.8e-145 518.5 351 73.5
Aqoxy3G03321 Aquilegia oxysepala HOM05D006074 ORTHO05D008728 6.2e-145 518.1 366 71.6
CANSAT64G1183 Cannabis sativa HOM05D006074 ORTHO05D008728 1.1e-144 517.3 400 67.5
PSO591G0110 Papaver somniferum HOM05D006074 ORTHO05D008728 1.4e-144 516.9 367 72.2
Medtr1g039990 Medicago truncatula HOM05D006074 ORTHO05D008728 5.3e-144 515.0 372 70.2
Lj2g0007765 Lotus japonicus HOM05D006074 ORTHO05D008728 9.0e-144 514.2 374 69.3
Dinv33738 Davidia involucrata HOM05D006074 ORTHO05D008728 1.5e-143 513.5 414 66.9
Thecc.04G099800 Theobroma cacao HOM05D006074 ORTHO05D008728 1.7e-142 510.0 380 68.4
CANSAT64G2140 Cannabis sativa HOM05D006074 ORTHO05D008728 2.9e-142 509.2 400 67.2
CSS0026374 Camellia sinensis var. sinensis HOM05D006074 ORTHO05D008728 4.9e-142 508.4 362 72.1
Cpa.g.sc14.19 Carica papaya HOM05D006074 ORTHO05D008728 1.1e-141 507.3 446 59.9
Lalb_Chr21g0318901 Lupinus albus HOM05D006074 ORTHO05D008728 1.4e-141 506.9 360 69.2
Sc14g0005980 Simmondsia chinensis HOM05D006074 ORTHO05D008728 2.5e-141 506.1 389 67.9
ECA232G4667 Erigeron canadensis HOM05D006074 ORTHO05D008728 3.2e-141 505.8 345 74.2
Phvul.004G027100 Phaseolus vulgaris HOM05D006074 ORTHO05D008728 3.2e-141 505.8 352 72.4
THA.LOC104823933 Tarenaya hassleriana HOM05D006074 ORTHO05D008728 4.2e-141 505.4 403 64.3
EL10Ac2g02949 Beta vulgaris HOM05D006074 ORTHO05D008728 5.5e-141 505.0 414 64.3
Gohir.A07G215200 Gossypium hirsutum HOM05D006074 ORTHO05D008728 7.1e-141 504.6 381 67.7
Eucgr.J01218 Eucalyptus grandis HOM05D006074 ORTHO05D008728 1.3e-139 500.4 353 71.1
PGR083G0972 Punica granatum HOM05D006074 ORTHO05D008728 1.3e-139 500.4 406 65.3
Cc07_g03180 Coffea canephora HOM05D006074 ORTHO05D008728 5.1e-139 498.4 376 71.0
ATR0564G024 Amborella trichopoda HOM05D006074 ORTHO05D008728 8.7e-139 497.7 355 70.1
Carub.0005s0731 Capsella rubella HOM05D006074 ORTHO05D008728 8.7e-139 497.7 361 68.7
Sp2g17410 Schrenkiella parvula HOM05D006074 ORTHO05D008728 8.7e-139 497.7 405 63.5
AT3G28760 Arabidopsis thaliana HOM05D006074 ORTHO05D008728 4.3e-138 495.4 383 65.5
AUR62031615 Chenopodium quinoa HOM05D006074 ORTHO05D008728 4.3e-138 495.4 400 64.5
BcaC06g30896 Brassica carinata HOM05D006074 ORTHO05D008728 7.4e-138 494.6 358 69.3
AUR62038861 Chenopodium quinoa HOM05D006074 ORTHO05D008728 9.6e-138 494.2 398 64.6
Sed0009974 Sechium edule HOM05D006074 ORTHO05D008728 1.6e-137 493.4 376 67.3
Aa31LG2G4460 Aethionema arabicum HOM05D006074 ORTHO05D008728 2.1e-137 493.0 406 61.1
Gorai.001G256400 Gossypium raimondii HOM05D006074 ORTHO05D008728 2.1e-137 493.0 415 62.9
arahy.Tifrunner.gnm1.ann1.V4TPJI Arachis hypogaea HOM05D006074 ORTHO05D008728 6.2e-137 491.5 359 68.2
Nitab4.5_0003081g0050 Nicotiana tabacum HOM05D006074 ORTHO05D008728 1.1e-136 490.7 352 72.7
COL.COLO4_36112 Corchorus olitorius HOM05D006074 ORTHO05D008728 1.4e-136 490.3 342 71.6
Hund15626 Selenicereus undatus HOM05D006074 ORTHO05D008728 1.4e-136 490.3 412 63.3
Nitab4.5_0000002g0350 Nicotiana tabacum HOM05D006074 ORTHO05D008728 2.4e-136 489.6 368 69.8
C07p37700 Brassica napus HOM05D006074 ORTHO05D008728 4.0e-136 488.8 353 68.3
BolC7t44287H Brassica oleracea HOM05D006074 ORTHO05D008728 4.0e-136 488.8 353 68.3
SGA_v2.0_scaffold59G20672 Striga asiatica HOM05D006074 ORTHO05D008728 4.0e-136 488.8 317 77.9
arahy.Tifrunner.gnm1.ann1.1Y4ZQN Arachis hypogaea HOM05D006074 ORTHO05D008728 5.3e-136 488.4 359 68.0
A06p40350 Brassica napus HOM05D006074 ORTHO05D008728 5.3e-136 488.4 376 65.4
BraA06t26953Z Brassica rapa HOM05D006074 ORTHO05D008728 5.3e-136 488.4 376 65.4
TWI34G1337 Tripterygium wilfordii HOM05D006074 ORTHO05D008728 1.2e-135 487.3 403 64.0
VMungo0464G0585 Vigna mungo HOM05D006074 ORTHO05D008728 1.2e-135 487.3 335 72.5
Os03g0170300 Oryza sativa ssp. japonica HOM05D006074 ORTHO05D008728 2.0e-135 486.5 367 66.2
BcaC06g33639 Brassica carinata HOM05D006074 ORTHO05D008728 4.5e-135 485.3 398 62.8
Atru.BG.207.p Acer truncatum HOM05D006074 ORTHO05D008728 7.6e-135 484.6 349 70.5
DCAR_021653 Daucus carota HOM05D006074 ORTHO05D008728 2.2e-134 483.0 385 64.2
AL5G18490 Arabidopsis lyrata HOM05D006074 ORTHO05D008728 2.9e-134 482.6 362 67.7
Gohir.D07G222100 Gossypium hirsutum HOM05D006074 ORTHO05D008728 1.4e-133 480.3 381 65.4
Peaxi162Scf00451g00822 Petunia axillaris HOM05D006074 ORTHO05D008728 6.0e-132 474.9 415 64.3
Nn4g23084 Nelumbo nucifera HOM05D006074 ORTHO05D008728 1.5e-130 470.3 310 76.5
Zm00001eb402270 Zea mays HOM05D006074 ORTHO05D008728 3.1e-128 462.6 353 65.7
Glyma.19G020800 Glycine max HOM05D006074 ORTHO05D008728 1.3e-126 457.2 367 63.8
TPR.G10370 Trifolium pratense HOM05D006074 ORTHO05D008728 3.6e-124 449.1 314 71.3
Ca_04272_v3 Cicer arietinum L. HOM05D006074 ORTHO05D008728 1.3e-118 430.6 321 68.5
Thhalv10004593m.g Eutrema salsugineum HOM05D006074 ORTHO05D008728 1.5e-114 417.2 321 64.5
Manes.15G177000 Manihot esculenta HOM05D006074 ORTHO05D008728 8.2e-113 411.4 273 73.3
AagrBONN_evm.TU.Sc2ySwM_228.462 Anthoceros agrestis HOM05D006074 ORTHO05D008728 2.7e-108 396.4 354 55.9
Pp3c9_19570 Physcomitrium patens HOM05D006074 ORTHO05D008728 3.9e-107 392.5 351 56.4
Pp3c10_1080 Physcomitrium patens HOM05D006074 ORTHO05D008728 2.2e-105 386.7 359 54.3
Mapoly0005s0075 Marchantia polymorpha HOM05D006074 ORTHO05D008728 6.8e-99 365.2 360 51.9
unitig_21.g20922 Utricularia gibba HOM05D006074 ORTHO05D008728 1.0e-94 351.3 275 64.0
FAN14G0759 Fragaria x ananassa HOM05D006074 ORTHO05D008728 8.6e-86 321.6 386 51.0
Pp3c15_19890 Physcomitrium patens HOM05D006074 ORTHO05D008728 8.9e-83 311.6 343 48.4
Glyma.13G064100 Glycine max HOM05D006074 ORTHO05D008728 2.2e-81 307.0 258 64.7
CDE02G2631 Ceratophyllum demersum HOM05D006074 ORTHO05D008728 3.2e-80 303.1 268 57.5
Ciclev10012867m.g Citrus clementina HOM05D006074 ORTHO05D008728 5.0e-78 295.8 185 79.5
MCO08G127 Micromonas commoda HOM05D006074 ORTHO05D008728 1.6e-71 274.2 366 43.7
SEGI_14685 Sequoiadendron giganteum HOM05D006074 ORTHO05D008728 3.9e-70 269.6 184 69.6
Lsat_1_v5_gn_4_177220 Lactuca sativa HOM05D006074 ORTHO05D008728 5.0e-70 269.2 184 71.7
Pp3c1_20750 Physcomitrium patens HOM05D006074 ORTHO05D020966 1.8e-67 260.8 418 37.6
Pp3c1_20753 Physcomitrium patens HOM05D006074 ORTHO05D020966 1.8e-67 260.8 418 37.6
Pp3c2_18540 Physcomitrium patens HOM05D006074 ORTHO05D020966 5.8e-66 255.8 416 36.5
CARHR151760 Cardamine hirsuta HOM05D006074 ORTHO05D008728 9.9e-58 228.4 207 56.0
Cre05.g248250 Chlamydomonas reinhardtii HOM05D006074 ORTHO05D008728 1.7e-57 227.6 343 42.3
Pp3c10_2120 Physcomitrium patens HOM05D006074 ORTHO05D020966 1.2e-55 221.5 523 29.8
PRCOL_00003957 Prasinoderma coloniale HOM05D006074 ORTHO05D008728 1.7e-46 191.0 363 36.1
Haze_18216 Corylus avellana HOM05D000132 ORTHO05D000058 4.8e-44 183.0 210 51.0
Lsat_1_v5_gn_0_26800 Lactuca sativa HOM05D006074 ORTHO05D008728 8.1e-44 182.2 153 60.8
Lsat_1_v5_gn_3_53141 Lactuca sativa HOM05D006074 ORTHO05D008728 3.9e-38 163.3 140 59.3
Actinidia17537 Actinidia chinensis HOM05D006074 ORTHO05D026256 3.4e-18 97.1 66 72.7
Atru.chr3.96 Acer truncatum HOM05D006074 ORTHO05D026256 4.5e-18 96.7 66 72.7
Sabra17G0081400 Salix brachista HOM05D006074 ORTHO05D008728 2.9e-17 94.0 71 63.4
CDE02G1972 Ceratophyllum demersum HOM05D006074 ORTHO05D026256 3.2e-16 90.5 67 68.7
Pp3c20_4730 Physcomitrium patens HOM05D006074 ORTHO05D026055 9.3e-16 89.0 170 34.1
Pp3c8_20190 Physcomitrium patens HOM05D006074 ORTHO05D026055 6.1e-15 86.3 172 33.1
Pp3c23_20410 Physcomitrium patens HOM05D006074 ORTHO05D026055 1.8e-14 84.7 167 32.9
Pp3c20_10280 Physcomitrium patens HOM05D006074 ORTHO05D026055 1.5e-13 81.6 171 32.2
PGSC0003DMG400013970 Solanum tuberosum HOM05D006074 ORTHO05D008728 1.5e-13 81.6 61 59.0
HanXRQChr09g0253281 Helianthus annuus HOM05D006074 ORTHO05D008728 4.5e-10 70.1 53 67.9
QL02p001457 Quercus lobata HOM05D002735 ORTHO05D003048 5.1e-06 56.6 112 36.6


User provided reference genes

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